EWM30158.1, cds496 (CDS) Nannochloropsis gaditana

Overview
NameEWM30158.1
Unique Namecds496
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1240311..1242854 -

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Properties
Property NameValue
Protein idEWM30158.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100096g4.966.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1240311..1242854 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30158.1 vs. NCBI_GenBank
Match: gi|585112815|gb|EWM30158.1| (hypothetical protein Naga_100096g4 [Nannochloropsis gaditana])

HSP 1 Score: 1694.86 bits (4388), Expect = 0.000e+0
Identity = 847/847 (100.00%), Postives = 847/847 (100.00%), Query Frame = 0 
Query:    1 MMAGPRSQSRGHGLAQADGLTSKGTLPSGITVQELKQITALRMAQLCQPPSLPHATHQTPRSTGLSQEDEPAPRAAPSLPGLSRTHPLVSQAATLSRASHSHTAVSLKGISTHDLVQQSPGGSMGGNEKALESREGLSTRSCPTGYGTPLGLRNESKRESENREKPVSSVSFGTDRACLDLSLGCRLDKKTAGCSTSTPWEAGASGSGQLSTSPSSLESDAQSLSSTNRGTSPGLASSRGGGNSSIPTSSLPHSLTVQELKELTRMRLAREAGIVTLPGTMEGGPDTRLSPEEGRCQYAPKHGQGPRTMRQSTHPHRCRGPSPSTSSTPASPMNSPMVSRPPSPQLYPMKGQSSESSTEETATQSSLPTSAVAPSPIPCGGAPLSSSCPASSPSFSFPGVPECANPPGTRDSVPNMGLRDQERRPELDSEGQGGEQSVGEAEWEGANGGLEKQEARVVASPGREVKSEGTKCRRPVATQREAWVVSDDAEAPTSSLPSHSPSYDPASRELPAFSFGAPSLSRGTLGLGASLGMRLMVPSPRTMAMGAHVRGSSDDLCMPSLRQRSISSTSSSAEMEDLPREVAEYVLLTPKSPGSPLMANALSFPGNSGQYGSAASAGASRPVLTLLPPHLQHPHQKRVAAVGEGVGGEVAGSEDKRDGKALDVQMRRIRSSERLLQLKEEVEEAMRRKAWGSGGKRLGPGWQGQTDQRHEALASGPGESREERVGNTVLIPGCGSEDGVNRALASKTPALTEGKRNIPSGLLHPSLPSKGFYSPATTGEADSSFDQMDMAFDGSVSGDIPFQSARQACRRNFCWQPPLQQPRHDTVYMDEFEQQLQPPLQTAQASK 847
            MMAGPRSQSRGHGLAQADGLTSKGTLPSGITVQELKQITALRMAQLCQPPSLPHATHQTPRSTGLSQEDEPAPRAAPSLPGLSRTHPLVSQAATLSRASHSHTAVSLKGISTHDLVQQSPGGSMGGNEKALESREGLSTRSCPTGYGTPLGLRNESKRESENREKPVSSVSFGTDRACLDLSLGCRLDKKTAGCSTSTPWEAGASGSGQLSTSPSSLESDAQSLSSTNRGTSPGLASSRGGGNSSIPTSSLPHSLTVQELKELTRMRLAREAGIVTLPGTMEGGPDTRLSPEEGRCQYAPKHGQGPRTMRQSTHPHRCRGPSPSTSSTPASPMNSPMVSRPPSPQLYPMKGQSSESSTEETATQSSLPTSAVAPSPIPCGGAPLSSSCPASSPSFSFPGVPECANPPGTRDSVPNMGLRDQERRPELDSEGQGGEQSVGEAEWEGANGGLEKQEARVVASPGREVKSEGTKCRRPVATQREAWVVSDDAEAPTSSLPSHSPSYDPASRELPAFSFGAPSLSRGTLGLGASLGMRLMVPSPRTMAMGAHVRGSSDDLCMPSLRQRSISSTSSSAEMEDLPREVAEYVLLTPKSPGSPLMANALSFPGNSGQYGSAASAGASRPVLTLLPPHLQHPHQKRVAAVGEGVGGEVAGSEDKRDGKALDVQMRRIRSSERLLQLKEEVEEAMRRKAWGSGGKRLGPGWQGQTDQRHEALASGPGESREERVGNTVLIPGCGSEDGVNRALASKTPALTEGKRNIPSGLLHPSLPSKGFYSPATTGEADSSFDQMDMAFDGSVSGDIPFQSARQACRRNFCWQPPLQQPRHDTVYMDEFEQQLQPPLQTAQASK
Sbjct:    1 MMAGPRSQSRGHGLAQADGLTSKGTLPSGITVQELKQITALRMAQLCQPPSLPHATHQTPRSTGLSQEDEPAPRAAPSLPGLSRTHPLVSQAATLSRASHSHTAVSLKGISTHDLVQQSPGGSMGGNEKALESREGLSTRSCPTGYGTPLGLRNESKRESENREKPVSSVSFGTDRACLDLSLGCRLDKKTAGCSTSTPWEAGASGSGQLSTSPSSLESDAQSLSSTNRGTSPGLASSRGGGNSSIPTSSLPHSLTVQELKELTRMRLAREAGIVTLPGTMEGGPDTRLSPEEGRCQYAPKHGQGPRTMRQSTHPHRCRGPSPSTSSTPASPMNSPMVSRPPSPQLYPMKGQSSESSTEETATQSSLPTSAVAPSPIPCGGAPLSSSCPASSPSFSFPGVPECANPPGTRDSVPNMGLRDQERRPELDSEGQGGEQSVGEAEWEGANGGLEKQEARVVASPGREVKSEGTKCRRPVATQREAWVVSDDAEAPTSSLPSHSPSYDPASRELPAFSFGAPSLSRGTLGLGASLGMRLMVPSPRTMAMGAHVRGSSDDLCMPSLRQRSISSTSSSAEMEDLPREVAEYVLLTPKSPGSPLMANALSFPGNSGQYGSAASAGASRPVLTLLPPHLQHPHQKRVAAVGEGVGGEVAGSEDKRDGKALDVQMRRIRSSERLLQLKEEVEEAMRRKAWGSGGKRLGPGWQGQTDQRHEALASGPGESREERVGNTVLIPGCGSEDGVNRALASKTPALTEGKRNIPSGLLHPSLPSKGFYSPATTGEADSSFDQMDMAFDGSVSGDIPFQSARQACRRNFCWQPPLQQPRHDTVYMDEFEQQLQPPLQTAQASK 847
[Close]
BLAST of EWM30158.1 vs. NCBI_GenBank
Match: gi|553182303|ref|XP_005853710.1| (hypothetical protein NGA_0475300, partial [Nannochloropsis gaditana CCMP526] >gi|422295351|gb|EKU22650.1| hypothetical protein NGA_0475300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 405.986 bits (1042), Expect = 1.070e-133
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0 
Query:  416 MGLRDQERRPELDSEGQGGEQSVGEAEWEGANGGLEKQEARVVASPGREVKSEGTKCRRPVATQREAWVVSDDAEAPTSSLPSHSPSYDPASRELPAFSFGAPSLSRGTLGLGASLGMRLMVPSPRTMAMGAHVRGSSDDLCMPSLRQRSISSTSSSAEMEDLPREVAEYVLLTPKSPGSPLMANALSFPGNSGQYGSAASAGASRP 622
            MGLRDQERRPELDSEGQGGEQSVGEAEWEGANGGLEKQEARVVASPGREVKSEGTKCRRPVATQREAWVVSDDAEAPTSSLPSHSPSYDPASRE PAFSFGAPSLSRGTLGLGASLGMRLMVPSPRTMAMGAHVRGSSDDLCMPSLR RSISSTSSSAEMEDLPREVAEYVLLTPKSPGSPLMANALSFPGNSGQYGSAASAGASRP
Sbjct:    1 MGLRDQERRPELDSEGQGGEQSVGEAEWEGANGGLEKQEARVVASPGREVKSEGTKCRRPVATQREAWVVSDDAEAPTSSLPSHSPSYDPASRECPAFSFGAPSLSRGTLGLGASLGMRLMVPSPRTMAMGAHVRGSSDDLCMPSLRLRSISSTSSSAEMEDLPREVAEYVLLTPKSPGSPLMANALSFPGNSGQYGSAASAGASRP 207
The following BLAST results are available for this feature:
BLAST of EWM30158.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112815|gb|EWM30158.1|0.000e+0100.00hypothetical protein Naga_100096g4 [Nannochloropsi... [more]
gi|553182303|ref|XP_005853710.1|1.070e-13399.03hypothetical protein NGA_0475300, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna496rna496Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications