EWM25721.1, cds4956 (CDS) Nannochloropsis gaditana

Overview
NameEWM25721.1
Unique Namecds4956
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:792501..793781 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25721.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100154g8.6619.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:792501..793781 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25721.1 vs. NCBI_GenBank
Match: gi|585107581|gb|EWM25721.1| (hypothetical protein Naga_100154g8 [Nannochloropsis gaditana])

HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0 
Query:    1 MAKRARKAGGSTPLEPRAAATRTEPDSTTTAVAPTTRGSSPSSPGSSSYRSEGRPSMARAPLPEDVDGRISPEPAPPSLVTAASAPTSDPATIPHTSCDFSPHPPPALPPPAPACATGKERLAPVAARDYTLFLRRPHRGTPPPPRPPPPPPPALDTHYLLRTKDAFSAYFRVFLRQWAGVPLLPLPSPPPPPASPSHPSPHAPGLITTGVLRDHVRGGLRCLSHLELLHVARQQWSHLSRRRRRPYFRLGPSYREGRGGVHPSSRRVAAEASRLARGYAAFQARENAPPWAGPEGLPLAPKVKSLAAWEMRRGRIPVVEAQARIGRMTEGERRRGRQAVREEKEEYDRAVERFCARHGRGGIEEGMEGGRGRGAREEEGEVGQEERGRELRKEEEEEGGVGGKTRRRRTTRTRTRTMMTSLWVCF 426
            MAKRARKAGGSTPLEPRAAATRTEPDSTTTAVAPTTRGSSPSSPGSSSYRSEGRPSMARAPLPEDVDGRISPEPAPPSLVTAASAPTSDPATIPHTSCDFSPHPPPALPPPAPACATGKERLAPVAARDYTLFLRRPHRGTPPPPRPPPPPPPALDTHYLLRTKDAFSAYFRVFLRQWAGVPLLPLPSPPPPPASPSHPSPHAPGLITTGVLRDHVRGGLRCLSHLELLHVARQQWSHLSRRRRRPYFRLGPSYREGRGGVHPSSRRVAAEASRLARGYAAFQARENAPPWAGPEGLPLAPKVKSLAAWEMRRGRIPVVEAQARIGRMTEGERRRGRQAVREEKEEYDRAVERFCARHGRGGIEEGMEGGRGRGAREEEGEVGQEERGRELRKEEEEEGGVGGKTRRRRTTRTRTRTMMTSLWVCF
Sbjct:    1 MAKRARKAGGSTPLEPRAAATRTEPDSTTTAVAPTTRGSSPSSPGSSSYRSEGRPSMARAPLPEDVDGRISPEPAPPSLVTAASAPTSDPATIPHTSCDFSPHPPPALPPPAPACATGKERLAPVAARDYTLFLRRPHRGTPPPPRPPPPPPPALDTHYLLRTKDAFSAYFRVFLRQWAGVPLLPLPSPPPPPASPSHPSPHAPGLITTGVLRDHVRGGLRCLSHLELLHVARQQWSHLSRRRRRPYFRLGPSYREGRGGVHPSSRRVAAEASRLARGYAAFQARENAPPWAGPEGLPLAPKVKSLAAWEMRRGRIPVVEAQARIGRMTEGERRRGRQAVREEKEEYDRAVERFCARHGRGGIEEGMEGGRGRGAREEEGEVGQEERGRELRKEEEEEGGVGGKTRRRRTTRTRTRTMMTSLWVCF 426
The following BLAST results are available for this feature:
BLAST of EWM25721.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107581|gb|EWM25721.1|0.000e+0100.00hypothetical protein Naga_100154g8 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4968rna4968Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications