EWM25740.1, cds4937 (CDS) Nannochloropsis gaditana

Overview
NameEWM25740.1
Unique Namecds4937
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:742860..745748 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25740.1
Productpseudouridylate synthase 7
Orig transcript idgnl|cribi|Naga_100087g13.1120.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:742860..745748 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom
IPR011760PsdUridine_synth_TruD_insert
IPR020119PsdUridine_synth_TruD_CS
IPR001656PsdUridine_synth_TruD
Homology
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|585107602|gb|EWM25740.1| (pseudouridylate synthase 7 [Nannochloropsis gaditana])

HSP 1 Score: 1943.7 bits (5034), Expect = 0.000e+0
Identity = 962/962 (100.00%), Postives = 962/962 (100.00%), Query Frame = 0
Query:    1 MNGLHYEARKPGQPPASPFPFSRTKFNAIIKRHPQDFEVREIDLEGIVADITTPAKFPASWEFAIRKGATAEAALGHDVTLNTSSTALAVRSSHLLPPCYGREELISRYGMELLKALESLHRRSVLEVLVPTTPYSQAGKGTESEVGEGKHTGCGEKAQEIERLEDEINIPLPSDRAARGMLHRSLRACFPGLSTCQHPHAPSLLRASKDTPKITLANALLQLQGVTLSHVLDLLAYMGRGPSDPGPETQAGVRLGGGLDRDARKQAHELITKHSPALQCISRNNIHVIVVWKPASGRQEKKKRRRSEFSCASSTSGHSPGNADMAGTHGFLARFVLCKRNVEHLEALQRVGRAWGLSLSTSLATAGVKDKRAITYQYVTASIPGTPDALDAFRRGVSKASLLFPGNVGAPASPPPPSVSLPARSPPLQEAVDPHAGPGAGGKGVGVGNLQDWGKDPSRRPLQAGQSLGNAFRVVVRHVHPRLAGVAGGKEAEDRSPVEESNGGSEGGEDGKPHMPETMMELDRRLQRLASEGFINFFGAQRVGMGAARGQEQEGGGEGGGEGGERGRATLGMPWELGRALLKQDFPTFLRLFLGVREEEDEGDEDGDGGGRGREEKREGLEGIGLSRSGIPGAGGTEGGRSEGGLVEEAEERTDREEEQGLAGGNARRGKRQEGSIADQRITTSQGEHRRRGGIQRAKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRSSMQGSIDMELRFRLPPGSFATVLIREVLGKEPVSW 962
            MNGLHYEARKPGQPPASPFPFSRTKFNAIIKRHPQDFEVREIDLEGIVADITTPAKFPASWEFAIRKGATAEAALGHDVTLNTSSTALAVRSSHLLPPCYGREELISRYGMELLKALESLHRRSVLEVLVPTTPYSQAGKGTESEVGEGKHTGCGEKAQEIERLEDEINIPLPSDRAARGMLHRSLRACFPGLSTCQHPHAPSLLRASKDTPKITLANALLQLQGVTLSHVLDLLAYMGRGPSDPGPETQAGVRLGGGLDRDARKQAHELITKHSPALQCISRNNIHVIVVWKPASGRQEKKKRRRSEFSCASSTSGHSPGNADMAGTHGFLARFVLCKRNVEHLEALQRVGRAWGLSLSTSLATAGVKDKRAITYQYVTASIPGTPDALDAFRRGVSKASLLFPGNVGAPASPPPPSVSLPARSPPLQEAVDPHAGPGAGGKGVGVGNLQDWGKDPSRRPLQAGQSLGNAFRVVVRHVHPRLAGVAGGKEAEDRSPVEESNGGSEGGEDGKPHMPETMMELDRRLQRLASEGFINFFGAQRVGMGAARGQEQEGGGEGGGEGGERGRATLGMPWELGRALLKQDFPTFLRLFLGVREEEDEGDEDGDGGGRGREEKREGLEGIGLSRSGIPGAGGTEGGRSEGGLVEEAEERTDREEEQGLAGGNARRGKRQEGSIADQRITTSQGEHRRRGGIQRAKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRSSMQGSIDMELRFRLPPGSFATVLIREVLGKEPVSW
Sbjct:    1 MNGLHYEARKPGQPPASPFPFSRTKFNAIIKRHPQDFEVREIDLEGIVADITTPAKFPASWEFAIRKGATAEAALGHDVTLNTSSTALAVRSSHLLPPCYGREELISRYGMELLKALESLHRRSVLEVLVPTTPYSQAGKGTESEVGEGKHTGCGEKAQEIERLEDEINIPLPSDRAARGMLHRSLRACFPGLSTCQHPHAPSLLRASKDTPKITLANALLQLQGVTLSHVLDLLAYMGRGPSDPGPETQAGVRLGGGLDRDARKQAHELITKHSPALQCISRNNIHVIVVWKPASGRQEKKKRRRSEFSCASSTSGHSPGNADMAGTHGFLARFVLCKRNVEHLEALQRVGRAWGLSLSTSLATAGVKDKRAITYQYVTASIPGTPDALDAFRRGVSKASLLFPGNVGAPASPPPPSVSLPARSPPLQEAVDPHAGPGAGGKGVGVGNLQDWGKDPSRRPLQAGQSLGNAFRVVVRHVHPRLAGVAGGKEAEDRSPVEESNGGSEGGEDGKPHMPETMMELDRRLQRLASEGFINFFGAQRVGMGAARGQEQEGGGEGGGEGGERGRATLGMPWELGRALLKQDFPTFLRLFLGVREEEDEGDEDGDGGGRGREEKREGLEGIGLSRSGIPGAGGTEGGRSEGGLVEEAEERTDREEEQGLAGGNARRGKRQEGSIADQRITTSQGEHRRRGGIQRAKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRSSMQGSIDMELRFRLPPGSFATVLIREVLGKEPVSW 962          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|919042357|ref|XP_013404425.1| (PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Lingula anatina])

HSP 1 Score: 109.383 bits (272), Expect = 7.492e-21
Identity = 74/246 (30.08%), Postives = 131/246 (53.25%), Query Frame = 0
Query:  723 ERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRE-RGGGGDQWEGDRAKEGGQ--GMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRS------SMQGSID-MELRFRLPPGSFATVLIREVLGKE 958
            E+  + GL+++     + A+  IP  +RT ++++YQ+++WN++V+RR++++G++ MAGD+VL+     G   D  + D  KE  Q  G  + + SV  +T E      AA      VV P+ GYGV  P +E        LLK++G+        A T++       + G+YR + V+PEG++W+    + D+  +P V    D   +      S +G +  +++ F LP G +AT+++RE L  E
Sbjct:  388 EQYVMTGLKKHQGKNFQAAIQMIPKNSRTLYMHSYQSYIWNQIVSRRIRQFGMKPMAGDLVLDSNTVDGADCDVDDLDAVKEQSQKSGDTASQPSVIVLTEE-----TAANYTIYDVVIPLPGYGVTYPENEVKQW-ISDLLKKDGI-------DADTFKQSLKSFSVSGSYRKMLVRPEGVKWSI--HRYDDNTIPLVLTDRDRLNNVELPTQSEEGQLKAIKVEFSLPKGCYATMVVREALKME 618          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|919042347|ref|XP_013404419.1| (PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Lingula anatina] >gi|919042349|ref|XP_013404420.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Lingula anatina] >gi|919042351|ref|XP_013404421.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Lingula anatina] >gi|919042353|ref|XP_013404423.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Lingula anatina] >gi|919042355|ref|XP_013404424.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Lingula anatina])

HSP 1 Score: 108.997 bits (271), Expect = 8.213e-21
Identity = 74/246 (30.08%), Postives = 129/246 (52.44%), Query Frame = 0
Query:  723 ERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRE-RGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQR--------SSMQGSID-MELRFRLPPGSFATVLIREVLGKE 958
            E+  + GL+++     + A+  IP  +RT ++++YQ+++WN++V+RR++++G++ MAGD+VL+     G   D  + D  KE  Q       S   V    LT + AA      VV P+ GYGV  P +E        LLK++G+        A T++       + G+YR + V+PEG++W+    + D+  +P V  + D  R         S +G +  +++ F LP G +AT+++RE L  E
Sbjct:  388 EQYVMTGLKKHQGKNFQAAIQMIPKNSRTLYMHSYQSYIWNQIVSRRIRQFGMKPMAGDLVLDSNTVDGADCDVDDLDAVKEQSQKSAGDTASQPSVIV--LTEETAANYTIYDVVIPLPGYGVTYPENEVKQW-ISDLLKKDGI-------DADTFKQSLKSFSVSGSYRKMLVRPEGVKWSI--HRYDDNTIPLV--LTDRDRLNNVELPTQSEEGQLKAIKVEFSLPKGCYATMVVREALKME 619          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|919052646|ref|XP_013408250.1| (PREDICTED: pseudouridylate synthase 7 homolog [Lingula anatina])

HSP 1 Score: 108.997 bits (271), Expect = 9.248e-21
Identity = 75/248 (30.24%), Postives = 132/248 (53.23%), Query Frame = 0
Query:  723 ERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRE-RGGGGDQWEGDRAKEGGQ--GMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQR--------SSMQGSID-MELRFRLPPGSFATVLIREVLGKE 958
            E+  + GL+++     + A+  IP  +RT ++++YQ+++WN++V+RR++++G++ MAGD+VL+     G   D  + D  KE  Q  G  + + SV  +T E      AA      VV P+ GYGV  P +E        LLK++G+        A T++       + G+YR + V+PEG++W+    + D+  +P V  + D  R         S +G +  +++ F LP G +AT+++RE L  E
Sbjct:  388 EQYVMTGLKKHQGKNFKAAIQMIPKNSRTLYMHSYQSYIWNQIVSRRIRQFGMKPMAGDLVLDSDTVDGADCDVDDLDAVKEQSQKSGDTASQPSVTVLTEE-----TAANYTIYDVVIPLPGYGVTYPENEVKQW-ISDLLKKDGI-------DADTFKQSLKSFSVSGSYRKMLVRPEGVKWSI--HRYDDNTIPLV--LTDRDRLNNVELPTQSEEGKLKAIKVEFSLPKGCYATMVVREALKME 618          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|953499453|emb|CEG39283.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 103.99 bits (258), Expect = 3.721e-19
Identity = 75/262 (28.63%), Postives = 123/262 (46.95%), Query Frame = 0
Query:  695 IQRAKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEEL-TGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRSSMQGSIDMELRFRLPPGSFATVLIREVL 955
            ++RAK L++  S  + + L+LLPP +  ER  ++GL+RYG    E+A+  I +  R  +++AYQ++++NR+ + R++RYG + + GD++                      Q  +   + V+ VTA E  T +        FV+ P+ G  V  P +    A          M E  R K+ +        G LKGAYR L   P  LEW++   +Q N                   ++ ++L F L  GSFAT+ +RE+L
Sbjct:  434 VRRAK-LYYLESGDIDSALKLLPPDLLVERQLLKGLKRYGDNAFEQAIQSISFARRVMYMHAYQSYVFNRMASIRLRRYGPKVVEGDLI----------------------QVSLQNNKVVKTVTAAEADTLNTTHENAISFVLLPLPGTNVVFPSNATTEA-------YNKMLEHDRTKNVLCKS-----GLLKGAYRSLIAYPRELEWSW-QEEQGN-------------------TLSLQLSFSLNSGSFATMCLREIL 640          

HSP 2 Score: 84.3445 bits (207), Expect = 5.388e-13
Identity = 94/396 (23.74%), Postives = 156/396 (39.39%), Query Frame = 0
Query:  159 QEIERL----EDEINIPLPSDRAARGMLHRSLRACFPGLSTCQHPHAPSLLRASKDTPKITLANALLQLQ--GVTLSHVLDLLAYMGRGPSDPGPETQAGVRLGGGLDRDARKQAHELITKHSPALQCIS--RNNIHVIVVW-KPASGRQEKKKRRRSEFSCASSTSGHSPGNADMAGTHGFLARFVLCKRNVEHLEALQRVGRAWGLSLSTSLATAGVKDKRAITYQYVTASIPGTPDALDAFRRGVSKASLLFPGNVGAPASPPPPSVSLPARSPPLQEAVDPHAGPGAGGKGVGVGNLQDWGKDPSRRPLQAGQSLGNAFRVVVRHVHPRLAGVAGGKEAEDRSPVEESNGGSEGGEDGKPHMPETMMELDRRLQRLASEGFINFFGAQRVGM 545
            +++ER+    E+E  +P P D   R  L   ++ CFPGL        P   +  +    + + +   + +  G+TL +   LL+++ +G  DP    + G+ L     ++AR   H LI K+S + +  +  R+    +VV+  P +     KKR+RSE                    H +L +FVL K N EH    +++ R   L L T+   AG+KDK AIT+Q+V       PD L +                                               +G  G+ +G+ +         P+  G + GN F +V+R++            ++D S  E                    + L+  L  +  +GFIN+FG QRVGM
Sbjct:  105 EKVERVAQNQENECLLPSPKDFRDRVYLQNCIQNCFPGLDCQMQKPFPFDDQQCEQQILVVVDSVYKRFRDGGITLRNCDHLLSFLRKGSEDPA--AKEGIELEHENSKEARTVLHRLIAKNSASFKTKTEMRDGTQRLVVYFSPKTN----KKRKRSE-------------------PHVYL-QFVLQKSNEEHFACFEKLARQLRLPL-TAFTYAGIKDKTAITFQHVVVQ-GAAPDQLLSV------------------------------------------INDESGSTGMRLGDFK-----YVETPMSLGGANGNKFLIVIRNLF-----------SKDTSTKE-----------------MVRLSLEDALTNVKRQGFINYFGFQRVGM 397          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|698793196|ref|XP_009829630.1| (hypothetical protein H257_06188 [Aphanomyces astaci] >gi|574115197|gb|ETV80683.1| hypothetical protein H257_06188 [Aphanomyces astaci])

HSP 1 Score: 101.679 bits (252), Expect = 3.649e-18
Identity = 77/262 (29.39%), Postives = 117/262 (44.66%), Query Frame = 0
Query:  698 AKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRSSMQGSIDMELRFRLPPGSFATVLIREVLGKEP 959
            AK  F D    ++  L+ LPP    ER  + GL+R+G  ++++A+ +IPY  R  +++AYQ+ L+N +   RVQ +G   M GD+VL+      G  +  GD                     E LT           VV P++G  VQ P ++ + A+   LL++E +          TW        +KGAYR L  +P  L W                A A+    SMQ          LPPGSFAT+++RE++ + P
Sbjct:  412 AKQAFLDTRN-IAQALKDLPPKCVNERTVLMGLRRHGHSDVKKAMLQIPYHRRVLYLHAYQSVLFNLMATYRVQTHGAAVMRGDLVLDS---TTGAVRVVGDHPD-----------------VEALTD----------VVLPLVGTKVQFPAND-VGAKYMELLRDERV-------DPATWSQD---ATVKGAYRHLICRPSDLAWDM------------DEATANVVAVSMQ----------LPPGSFATIVLREIMKQHP 609          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|926610161|ref|XP_013787304.1| (PREDICTED: pseudouridylate synthase 7 homolog [Limulus polyphemus])

HSP 1 Score: 98.9821 bits (245), Expect = 1.213e-17
Identity = 76/273 (27.84%), Postives = 139/273 (50.92%), Query Frame = 0
Query:  698 AKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPF-VVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADNQRSSMQGSI-------DMELRFRLPPGSFATVLIREVLGKEPVSW 962
             + L+W+ +   S  +R L    T E   ++GL  +G  ++  AL  IP   R  ++++YQ+++WN++V RR++++GL  + GD++L G +        E D  K+G    +SK  S   VT  +L     +  ++ + +V P+ GY +  P++E M  E  + L E+       N +  +++S+     L G+YR L V+P+ + W  L  + D++  P V +  D  +     S+        ++L F LP  S+AT+ IRE+L  +  +W
Sbjct:  398 CRKLWWE-TRDASKAIRQLQRKSTIEGHLLQGLVAHGPNDLVNALNFIPRNTRLMYIHSYQSFIWNKVVTRRIKQFGLVPIIGDLLLPGNDP-------EKDVCKDG----ISK-CSPSVVTEADL-----SKGISIYDIVLPLPGYNIVYPQNEVM--EWYKELLEKD------NLTLTSFQSRVKSYSLGGSYRHLLVRPQLMSWAIL--RYDDIKEPLVLSDLDVVQGVQLPSVLTSGKLKALKLEFSLPSSSYATMAIREILKMDTSAW 642          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|698776714|ref|XP_009821401.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574123526|gb|ETV89001.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 97.8265 bits (242), Expect = 4.826e-17
Identity = 79/263 (30.04%), Postives = 123/263 (46.77%), Query Frame = 0
Query:  709 LSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRY-GLRAMAGDVVLEGRERGGGGDQ---WEGDRAKEGGQGM-VSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDE--AMHAECCRLLKEEGM--WEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADN-QRSSMQGSI------DMELRFRLPPGSFATVLIREVL 955
            +SA LR+ PP +  E   + GLQR+G  E  RA+  IP + R  + +AYQ+++WN   + R+  +     + GD+V+ G   G  G Q   WEG    +  +     KRQ V       +T           VV PV GY   LP++E  A++  C R   E+G+    + RN+S            L G+YR +  KP+ +  T    + ++  +P V +  D   + +   SI       + L F LP  S+AT+ IRE+L
Sbjct:  528 VSAALRMFPPYLIAEVAVLEGLQRHGLDEFHRAIQNIPPKLRMIYTHAYQSYIWNEAASVRLTTFSSTHPVVGDMVVRGSVVGSSGVQVEDWEGADGDDASRDQPAKKRQRVMEHDIVFITEANIGEYSIEDVVLPVHGYNTLLPKNEIAAIYERCAR---EDGVDFASLKRNQSPEY--------NLPGSYRHIVCKPKAVAHTI--KRYNDETIPLVESDVDRLMKRTAPPSIPDGRFRSICLDFILPSSSYATIAIRELL 777          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|698776712|ref|XP_009821400.1| (hypothetical protein H257_00413 [Aphanomyces astaci] >gi|574123525|gb|ETV89000.1| hypothetical protein H257_00413 [Aphanomyces astaci])

HSP 1 Score: 97.8265 bits (242), Expect = 4.880e-17
Identity = 79/263 (30.04%), Postives = 123/263 (46.77%), Query Frame = 0
Query:  709 LSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRY-GLRAMAGDVVLEGRERGGGGDQ---WEGDRAKEGGQGM-VSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDE--AMHAECCRLLKEEGM--WEMLRNKSAMTWESQRLVGKLKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHVHAVADN-QRSSMQGSI------DMELRFRLPPGSFATVLIREVL 955
            +SA LR+ PP +  E   + GLQR+G  E  RA+  IP + R  + +AYQ+++WN   + R+  +     + GD+V+ G   G  G Q   WEG    +  +     KRQ V       +T           VV PV GY   LP++E  A++  C R   E+G+    + RN+S            L G+YR +  KP+ +  T    + ++  +P V +  D   + +   SI       + L F LP  S+AT+ IRE+L
Sbjct:  537 VSAALRMFPPYLIAEVAVLEGLQRHGLDEFHRAIQNIPPKLRMIYTHAYQSYIWNEAASVRLTTFSSTHPVVGDMVVRGSVVGSSGVQVEDWEGADGDDASRDQPAKKRQRVMEHDIVFITEANIGEYSIEDVVLPVHGYNTLLPKNEIAAIYERCAR---EDGVDFASLKRNQSPEY--------NLPGSYRHIVCKPKAVAHTI--KRYNDETIPLVESDVDRLMKRTAPPSIPDGRFRSICLDFILPSSSYATIAIRELL 786          
BLAST of EWM25740.1 vs. NCBI_GenBank
Match: gi|1126160379|ref|XP_019624819.1| (PREDICTED: pseudouridylate synthase 7 homolog [Branchiostoma belcheri])

HSP 1 Score: 97.0561 bits (240), Expect = 5.438e-17
Identity = 79/288 (27.43%), Postives = 138/288 (47.92%), Query Frame = 0
Query:  686 QGEHRRRGGIQRAKALFWDRSTPLSAVLRLLPPTMTR--ERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRERGGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWESQRLVGK---LKGAYRPLFVKPEGLEWTFLTPKQDNVHVPHV---HAVADNQRSSMQGS----IDMELRFRLPPGSFATVLIREVLGKEPVS 961
            +GEH+  G +   +  +W       A+ R+    M++  E   ++GL + G+ ++  AL  IP   R  +V++YQ+++WN +V+RR+Q YG + + GD+VL+ R+        +GD+  E                A+ LT           VVFP+ GY V  P+ +A          EE   EML +   +  ++ R   K   L GAYR + +KP   +W+ +    D+V +P +     + D + + +  S      +++ F LPP ++AT+ +REVL  +  S
Sbjct:  392 EGEHQE-GAVSACRDYWWKTRDAKGALERMPKRNMSKDIEGHLLQGLVKNGK-DLVGALSSIPRNTRMLYVHSYQSYIWNSVVSRRLQEYGFQPVVGDLVLQDRK--------DGDQRAE----------------AKALTEGDLENCTIHDVVFPLFGYDVIYPQHKA----------EEWYREML-SVDQLDMDNIRHKVKDYSLSGAYRKIVMKPTNCKWSVMY--YDDVKIPLMLTDKDILDGKEAPLAASEGKMKALKVEFTLPPSTYATMALREVLKTDTSS 640          
The following BLAST results are available for this feature:
BLAST of EWM25740.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107602|gb|EWM25740.1|0.000e+0100.00pseudouridylate synthase 7 [Nannochloropsis gadita... [more]
gi|919042357|ref|XP_013404425.1|7.492e-2130.08PREDICTED: pseudouridylate synthase 7 homolog isof... [more]
gi|919042347|ref|XP_013404419.1|8.213e-2130.08PREDICTED: pseudouridylate synthase 7 homolog isof... [more]
gi|919052646|ref|XP_013408250.1|9.248e-2130.24PREDICTED: pseudouridylate synthase 7 homolog [Lin... [more]
gi|953499453|emb|CEG39283.1|3.721e-1928.63Uncharacterized conserved protein [Plasmopara hals... [more]
gi|698793196|ref|XP_009829630.1|3.649e-1829.39hypothetical protein H257_06188 [Aphanomyces astac... [more]
gi|926610161|ref|XP_013787304.1|1.213e-1727.84PREDICTED: pseudouridylate synthase 7 homolog [Lim... [more]
gi|698776714|ref|XP_009821401.1|4.826e-1730.04hypothetical protein, variant [Aphanomyces astaci]... [more]
gi|698776712|ref|XP_009821400.1|4.880e-1730.04hypothetical protein H257_00413 [Aphanomyces astac... [more]
gi|1126160379|ref|XP_019624819.1|5.438e-1727.43PREDICTED: pseudouridylate synthase 7 homolog [Bra... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4949rna4949Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications