EWM25731.1, cds4936 (CDS) Nannochloropsis gaditana

Overview
NameEWM25731.1
Unique Namecds4936
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:738425..740212 -

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Properties
Property NameValue
Protein idEWM25731.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100087g15.1111.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:738425..740212 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25731.1 vs. NCBI_GenBank
Match: gi|585107593|gb|EWM25731.1| (hypothetical protein Naga_100087g15 [Nannochloropsis gaditana])

HSP 1 Score: 1197.19 bits (3096), Expect = 0.000e+0
Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 0
Query:    1 MMCAPNSLGSKMVGLPGTIGSKGTPSVASRTQTLIGQCENLAQGGRAFVQQIQKMASMGLLDRRKMVDYVRIVSLFNQATGKDTSHGLLDLVYHLLTCMSAGEDGGSSLSQIELLHTIGGGIGEIGGKGVRAVPGSSAATPPELDDLACYIISRGGTGAESVFCSEAMKQLFISTDELTCTLKETGLTSVSVWASFTTPEGLATLHRAAAAVLLQRDTSQVEVQVECVTRTDLLVACTGTLTFHVSEKGESSLVLCLAVKQDASPRAVGAPAKPRSDALLPAGEKSPPSSQRRSSSRRSTHAAERQAVLASRREQALQQQAKEQLQQQQQRHERASKRRRLPPTEAAPVSPSSASPLHASSSSVCSTSSAASSTSTASSASLPASLAMPPATGTSSFSYRPPPHRPFPSSMRRKTSFPVSWSARGPLLPAGLLRLMDSGAAPEPLPMGLLPAGKEGFDASVDGERGRMEQGEQDGLSQGMVLARGLPEGVNYGRGGGEIFTLNRHESGRGGMAATAPETSSRTTAMEEEKVPHANEGEEEDDGLWAWADSIWEGAAPSLELGTDLAVSGAVGEGPGVSDVEDPSLWLMLDEGAME 595
            MMCAPNSLGSKMVGLPGTIGSKGTPSVASRTQTLIGQCENLAQGGRAFVQQIQKMASMGLLDRRKMVDYVRIVSLFNQATGKDTSHGLLDLVYHLLTCMSAGEDGGSSLSQIELLHTIGGGIGEIGGKGVRAVPGSSAATPPELDDLACYIISRGGTGAESVFCSEAMKQLFISTDELTCTLKETGLTSVSVWASFTTPEGLATLHRAAAAVLLQRDTSQVEVQVECVTRTDLLVACTGTLTFHVSEKGESSLVLCLAVKQDASPRAVGAPAKPRSDALLPAGEKSPPSSQRRSSSRRSTHAAERQAVLASRREQALQQQAKEQLQQQQQRHERASKRRRLPPTEAAPVSPSSASPLHASSSSVCSTSSAASSTSTASSASLPASLAMPPATGTSSFSYRPPPHRPFPSSMRRKTSFPVSWSARGPLLPAGLLRLMDSGAAPEPLPMGLLPAGKEGFDASVDGERGRMEQGEQDGLSQGMVLARGLPEGVNYGRGGGEIFTLNRHESGRGGMAATAPETSSRTTAMEEEKVPHANEGEEEDDGLWAWADSIWEGAAPSLELGTDLAVSGAVGEGPGVSDVEDPSLWLMLDEGAME
Sbjct:    1 MMCAPNSLGSKMVGLPGTIGSKGTPSVASRTQTLIGQCENLAQGGRAFVQQIQKMASMGLLDRRKMVDYVRIVSLFNQATGKDTSHGLLDLVYHLLTCMSAGEDGGSSLSQIELLHTIGGGIGEIGGKGVRAVPGSSAATPPELDDLACYIISRGGTGAESVFCSEAMKQLFISTDELTCTLKETGLTSVSVWASFTTPEGLATLHRAAAAVLLQRDTSQVEVQVECVTRTDLLVACTGTLTFHVSEKGESSLVLCLAVKQDASPRAVGAPAKPRSDALLPAGEKSPPSSQRRSSSRRSTHAAERQAVLASRREQALQQQAKEQLQQQQQRHERASKRRRLPPTEAAPVSPSSASPLHASSSSVCSTSSAASSTSTASSASLPASLAMPPATGTSSFSYRPPPHRPFPSSMRRKTSFPVSWSARGPLLPAGLLRLMDSGAAPEPLPMGLLPAGKEGFDASVDGERGRMEQGEQDGLSQGMVLARGLPEGVNYGRGGGEIFTLNRHESGRGGMAATAPETSSRTTAMEEEKVPHANEGEEEDDGLWAWADSIWEGAAPSLELGTDLAVSGAVGEGPGVSDVEDPSLWLMLDEGAME 595          
BLAST of EWM25731.1 vs. NCBI_GenBank
Match: gi|585109633|gb|EWM27402.1| (hypothetical protein Naga_100212g6 [Nannochloropsis gaditana])

HSP 1 Score: 76.2554 bits (186), Expect = 6.831e-11
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 0
Query:   52 IQKMASMGLLDRRKMVDYVRIVSLFNQATG-KDTSHGLLDLVYHLLTCMSAGEDGGSSLSQIELLHTIGGGIGEIGGKGVRAVPGSSAATPPEL---------DDLACYII-SRGGTGAESVFCSEAMKQLFISTDELTCTLKETGLTSVSVWASFTTPEGLATLHRAAAAVLLQR-DTSQVEVQVECVTR 230
            I ++A+ G+LD  K+ +   ++   +QA G  D + G+L L+ HLL       D        +      GG+GE G     A  G+SA   P +         D+ ACY++ S   TG ESV+C++ M +LFIS++EL     +T +   S W  F +  GL  L  A +A+++Q   T  ++V +EC  +
Sbjct:  310 IARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLL-------DTQPQAFAPKRRKAKSGGVGERGPPAGGAQ-GNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQ 492          
BLAST of EWM25731.1 vs. NCBI_GenBank
Match: gi|553186625|ref|XP_005854455.1| (hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526] >gi|553187875|ref|XP_005854696.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294361|gb|EKU21661.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294601|gb|EKU21901.1| hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 75.8702 bits (185), Expect = 8.882e-11
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 0
Query:   52 IQKMASMGLLDRRKMVDYVRIVSLFNQATG-KDTSHGLLDLVYHLLTCMSAGEDGGSSLSQIELLHTIGGGIGEIGGKGVRAVPGSSAATPPEL---------DDLACYII-SRGGTGAESVFCSEAMKQLFISTDELTCTLKETGLTSVSVWASFTTPEGLATLHRAAAAVLLQR-DTSQVEVQVECVTR 230
            I ++A+ G+LD  K+ +   ++   +QA G  D + G+L L+ HLL       D        +      GG+GE G     A  G+SA   P +         D+ ACY++ S   TG ESV+C++ M +LFIS++EL     +T +   S W  F +  GL  L  A +A+++Q   T  ++V +EC  +
Sbjct:  310 IARLAAQGMLDWEKVFNARALIRACSQARGVADMTAGVLPLLDHLL-------DTQPQAFAPKRRKAKSGGVGERGPPAGGAQ-GNSAGGDPSISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILECCVQ 492          
The following BLAST results are available for this feature:
BLAST of EWM25731.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585107593|gb|EWM25731.1|0.000e+0100.00hypothetical protein Naga_100087g15 [Nannochlorops... [more]
gi|585109633|gb|EWM27402.1|6.831e-1130.89hypothetical protein Naga_100212g6 [Nannochloropsi... [more]
gi|553186625|ref|XP_005854455.1|8.882e-1130.89hypothetical protein NGA_0244301 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4948rna4948Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications