EWM25747.1, cds4926 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|585107610|gb|EWM25747.1| (set domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1099.73 bits (2843), Expect = 0.000e+0 Identity = 535/535 (100.00%), Postives = 535/535 (100.00%), Query Frame = 0
Query: 1 MAGHGDSQPENEGRSGCAKWWRGFIKKLRTILKGSLRLQQASDSPSIAVALSLDEVNSHIKSTLDVQSLHTSALFCFNQRKFIVESIGRSGVSAASIALLLLPQTPPGEASGMRNVLRCAAQSLLPDAAGLLEWIEKRAGPNALGQKPPLPFQTRVHGLGLKAPDRGYSAGDVVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDVDRDLGGGRQKLLGPVALAAHLSMALMDRDNIIHPFARFLKDIDMQNTTHPLLLNAQELQYLQASPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSNCLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLPRDQTEQELGYGDQYVEMALKSNISMEQEAVLLEEAVNETCKRSRLSTGQALDVISHALNRGLELYDTSLERDLEALQSLEEEKWEAEGRQAWRRTCLSLLVEEKTALRRGLKAVQNRKEKSR 535
MAGHGDSQPENEGRSGCAKWWRGFIKKLRTILKGSLRLQQASDSPSIAVALSLDEVNSHIKSTLDVQSLHTSALFCFNQRKFIVESIGRSGVSAASIALLLLPQTPPGEASGMRNVLRCAAQSLLPDAAGLLEWIEKRAGPNALGQKPPLPFQTRVHGLGLKAPDRGYSAGDVVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDVDRDLGGGRQKLLGPVALAAHLSMALMDRDNIIHPFARFLKDIDMQNTTHPLLLNAQELQYLQASPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSNCLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLPRDQTEQELGYGDQYVEMALKSNISMEQEAVLLEEAVNETCKRSRLSTGQALDVISHALNRGLELYDTSLERDLEALQSLEEEKWEAEGRQAWRRTCLSLLVEEKTALRRGLKAVQNRKEKSR
Sbjct: 1 MAGHGDSQPENEGRSGCAKWWRGFIKKLRTILKGSLRLQQASDSPSIAVALSLDEVNSHIKSTLDVQSLHTSALFCFNQRKFIVESIGRSGVSAASIALLLLPQTPPGEASGMRNVLRCAAQSLLPDAAGLLEWIEKRAGPNALGQKPPLPFQTRVHGLGLKAPDRGYSAGDVVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDVDRDLGGGRQKLLGPVALAAHLSMALMDRDNIIHPFARFLKDIDMQNTTHPLLLNAQELQYLQASPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSNCLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLPRDQTEQELGYGDQYVEMALKSNISMEQEAVLLEEAVNETCKRSRLSTGQALDVISHALNRGLELYDTSLERDLEALQSLEEEKWEAEGRQAWRRTCLSLLVEEKTALRRGLKAVQNRKEKSR 535
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|1214707551|gb|OWZ18939.1| (hypothetical protein PHMEG_0006888 [Phytophthora megakarya]) HSP 1 Score: 102.834 bits (255), Expect = 6.878e-20 Identity = 83/283 (29.33%), Postives = 129/283 (45.58%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNI----IHPFARFLKDIDMQNTTHPLLLNAQELQYLQ-ASPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+ G+G+ R + D +VF +VW P SA ALE +Q GF L + ++ L G + + L H+ +MA MD + ++ RF +D+ PL N ++ + LQ AR AV+ Y +++ LF S ++ + FFWAIS ++SRA SGP+QP + +PFFD NH + C+ D + G V +++ PGE+L + Y + DN ++L YGF NP V V+LP
Sbjct: 29 IPGMGVGVVAREHIPKDTLVFQAGHDVWYPFSAECALETAQQKAPGFLNQLDQLLASNKALQIGSSFVPSALVLGVHMLVNFPHAEDPDATLMAMATMDSPPLDELYVNALPRF---VDL-----PLYWNDKQFEELQGCQEARRAVQHGARFYSQVYQHLFGS------------NNEFVNPEAFFWAISILMSRATSGPKQPFTLIPFFDWFNHADNGDECVQEFDPQKG-FTVHTTKTYEPGEQLFIKYGNH-DNLRLLRNYGFTTLNNPYDV---VNLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|301094169|ref|XP_002997928.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262109714|gb|EEY67766.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 91.2781 bits (225), Expect = 5.157e-16 Identity = 75/262 (28.63%), Postives = 118/262 (45.04%), Query Frame = 0
Query: 173 VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+VF +VW P SA +ALE +Q GF L + ++ L G + + L H+ +MA +D+ + + L + +D+ PL + ++ + LQ AR AV+ Y +++ LF GT ++ + FFWAIS ++SRA SG QP + +PFFD NH + C+ D + G V +++ PGE+L + Y N ++L YGF NP V V LP
Sbjct: 47 LVFKAGQDVWYPFSAEYALETAQQKAPGFLSQLDQLLASNKALREGSSFVPSALVLGVHMLVNFPHAEDPDGLLMAMASVDKPPLDELYVSALPRYVDL-----PLYWDDRKFKELQGCEEARRAVQHGARFYSQVYQHLF------GTNNQ------FVSAEAFFWAISILMSRATSGQNQPFALIPFFDWFNHADNGDECVQEFDPQKG-FTVHTTKAYEPGEQLYINYGSHS-NLRLLRNYGFTTPNNPYDV---VTLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|675165915|ref|XP_008891842.1| (hypothetical protein PPTG_02497 [Phytophthora parasitica INRA-310] >gi|568107985|gb|ETN22609.1| hypothetical protein PPTG_02497 [Phytophthora parasitica INRA-310]) HSP 1 Score: 88.9669 bits (219), Expect = 2.644e-15 Identity = 79/280 (28.21%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+ G+G+ R D +VF EVW P SA +ALE +Q GF L + + L G + + L H+ +MA +D+ + + L + +D+ PL + ++ + LQ R A++ Y +++ LF G +E I FFWAIS ++SRA SG QP + +PFFD NH + C+ D G V +++ PGE+L + Y + N ++L YGF NP V V LP
Sbjct: 29 IPGMGVGIVAREQIPKDTLVFQAGQEVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDL-----PLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLF------GNNNE------FINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGNH-GNLRLLRNYGFTTPNNPYDV---VTLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|675165917|ref|XP_008891843.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568107986|gb|ETN22610.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 88.1965 bits (217), Expect = 3.853e-15 Identity = 79/280 (28.21%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+ G+G+ R D +VF EVW P SA +ALE +Q GF L + + L G + + L H+ +MA +D+ + + L + +D+ PL + ++ + LQ R A++ Y +++ LF G +E I FFWAIS ++SRA SG QP + +PFFD NH + C+ D G V +++ PGE+L + Y + N ++L YGF NP V V LP
Sbjct: 29 IPGMGVGIVAREQIPKDTLVFQAGQEVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDL-----PLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLF------GNNNE------FINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGNH-GNLRLLRNYGFTTPNNPYDV---VTLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|566027034|gb|ETI49945.1| (hypothetical protein F443_06384 [Phytophthora parasitica P1569] >gi|567964346|gb|ETK89834.1| hypothetical protein L915_06269 [Phytophthora parasitica] >gi|567993049|gb|ETL43234.1| hypothetical protein L916_06206 [Phytophthora parasitica] >gi|568022345|gb|ETL96421.1| hypothetical protein L917_06078 [Phytophthora parasitica] >gi|570330709|gb|ETO78657.1| hypothetical protein F444_06448 [Phytophthora parasitica P1976] >gi|570954467|gb|ETP19724.1| hypothetical protein F441_06390 [Phytophthora parasitica CJ01A1] >gi|570989417|gb|ETP47647.1| hypothetical protein F442_06429 [Phytophthora parasitica P10297]) HSP 1 Score: 87.8113 bits (216), Expect = 7.414e-15 Identity = 78/280 (27.86%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+ G+G+ R D +VF +VW P SA +ALE +Q GF L + + L G + + L H+ +MA +D+ + + L + +D+ PL + ++ + LQ R A++ Y +++ LF G +E I FFWAIS ++SRA SG QP + +PFFD NH + C+ D G V +++ PGE+L + Y + N ++L YGF NP V V LP
Sbjct: 29 IPGMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDL-----PLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLF------GNNNE------FINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGNH-GNLRLLRNYGFTTPNNPYDV---VTLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|970629257|gb|KUF76561.1| (Histone-lysine N-methyltransferase setd3 [Phytophthora nicotianae]) HSP 1 Score: 87.4261 bits (215), Expect = 7.899e-15 Identity = 78/280 (27.86%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+ G+G+ R D +VF +VW P SA +ALE +Q GF L + + L G + + L H+ +MA +D+ + + L + +D+ PL + ++ + LQ R A++ Y +++ LF G +E I FFWAIS ++SRA SG QP + +PFFD NH + C+ D G V +++ PGE+L + Y + N ++L YGF NP V V LP
Sbjct: 29 IPGMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDL-----PLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLF------GNNNE------FINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGNH-GNLRLLRNYGFTTPNNPYDV---VTLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|566027035|gb|ETI49946.1| (hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567964347|gb|ETK89835.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567993050|gb|ETL43235.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568022346|gb|ETL96422.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570330710|gb|ETO78658.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570954468|gb|ETP19725.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570989418|gb|ETP47648.1| hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 86.6557 bits (213), Expect = 1.089e-14 Identity = 78/280 (27.86%), Postives = 122/280 (43.57%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRRQSN-CLYGLDEKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLP 413
+ G+G+ R D +VF +VW P SA +ALE +Q GF L + + L G + + L H+ +MA +D+ + + L + +D+ PL + ++ + LQ R A++ Y +++ LF G +E I FFWAIS ++SRA SG QP + +PFFD NH + C+ D G V +++ PGE+L + Y + N ++L YGF NP V V LP
Sbjct: 29 IPGMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDL-----PLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLF------GNNNE------FINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGNH-GNLRLLRNYGFTTPNNPYDV---VTLP 286
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|695388571|ref|XP_009519212.1| (hypothetical protein PHYSODRAFT_296170 [Phytophthora sojae] >gi|348684109|gb|EGZ23924.1| hypothetical protein PHYSODRAFT_296170 [Phytophthora sojae]) HSP 1 Score: 87.0409 bits (214), Expect = 1.168e-14 Identity = 80/301 (26.58%), Postives = 126/301 (41.86%), Query Frame = 0
Query: 156 VHGLGLKAPDRGYSAGD-VVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDV---DRDLGGGRQKLLGPVALAAHL---------------SMALMDRDNIIHPFARFL-KDIDMQNTTHPLLLNAQELQYLQA-SPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNH--RRQSNCLYGLD--------EKTGTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGNPSGVTLRVDLPRDQTEQELGYGD 425
+ G+G+ R + D +VF +VW P SA ALE +Q GF L + R L G + + L H+ +MA M+ + + L + +D+ PL + ++ + LQ AR A++ Y +++ LF + ++ + FFWAIS ++SRA SG QP + +PFFD NH NC + LD + + ++R PGE+L + Y N ++L YGF NP V V+LP Q+ D
Sbjct: 29 IPGMGVGVVAREHIPKDTLVFQAGEDVWYPFSAEHALETAQQKAPGFLNQLNQLLASSRVLREGSSFVPSALVLGVHMLVNFPHSENPETSLMAMASMNTPPLDELYVNALPRYVDL-----PLYWDDKQFEELQGCEEARRAMQHGARFYSQVYKHLFGA------------NNQFVNAEAFFWAISILMSRATSGQNQPFALIPFFDWFNHAGNGSDNCRHALDSDECVQDFDMQKGFTIHTTRSYEPGEQLFINYGSH-GNLRLLRNYGFTMPNNPYDV---VNLPMPAALQQPNEAD 308
BLAST of EWM25747.1 vs. NCBI_GenBank
Match: gi|255075907|ref|XP_002501628.1| (predicted protein [Micromonas commoda] >gi|226516892|gb|ACO62886.1| predicted protein [Micromonas commoda]) HSP 1 Score: 85.8853 bits (211), Expect = 5.567e-14 Identity = 85/288 (29.51%), Postives = 121/288 (42.01%), Query Frame = 0
Query: 133 EWIEKR--AGPNALGQK---PPLPFQTRVHGLGLK-APDRGYSAGDVVFSLPLEVWGPASAPFALEDSQASNSGFFQALCDVDRDLGGGRQKLLGPVALAAHLSMALMD-RDNIIHPFARFLKDIDMQNTTHPLLLNAQELQYLQASPARGAVRKRQEVYGRIHHRLFASPSSPGTASENKRSSIHIPKTTFFWAISRVLSRAVSGPRQPLSFLPFFDLMNHRR-QSNCLY-------GLDEKT---GTLVVRSSRPIRPGEELSLCYSDRKDNHQMLVTYGFVEAGN 402
EW+ R A A G + P RV G+G+ R AG++V +P + + P SA AL ++A F V +G +L ALA H+ L D R A + + PLL ++ L+ +P G V +R + H LF +P F WA+S VLSRA SG R P +FLP DL+NH +NC G +E+ G + V + GE+L++ Y D DN ++L YGF GN
Sbjct: 56 EWLHARVSADETARGGRRNVHPAVTAARVPGMGVGLVARRPVRAGEIVLRIPRDAYAPLSATHALAAAKAKAPAFVDHAAKVAASMGA--PELATHAALALHVLFELGDPRSEGFAYLATLPGLAGKASPSVPLLWTPTQVATLRGTPTHGRVLRRAKFVSDAHAALF-----------GSGGGGGVPLEKFAWALSSVLSRAASGDRMPYAFLPGVDLLNHGGVDANCELSAVKLAPGGNEENVTWGDVEVTCVKDTPAGEQLTISYGDESDNCRLLRLYGFATRGN 330 The following BLAST results are available for this feature:
BLAST of EWM25747.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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