EWM25758.1, cds4925 (CDS) Nannochloropsis gaditana

Overview
NameEWM25758.1
Unique Namecds4925
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:714123..714300 +
Alignment locationCM002464.1:714405..714727 +
Alignment locationCM002464.1:714960..715913 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25758.1
Producttrna-dihydrouridine synthase 2
Orig transcript idgnl|cribi|Naga_100162g12.1257.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:714123..714300 +
CM002464.1supercontigCM002464.1:714405..714727 +
CM002464.1supercontigCM002464.1:714960..715913 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0017150tRNA dihydrouridine synthase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR018517tRNA_hU_synthase_CS
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
Homology
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|585107621|gb|EWM25758.1| (trna-dihydrouridine synthase 2 [Nannochloropsis gaditana])

HSP 1 Score: 990.334 bits (2559), Expect = 0.000e+0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query:    1 MDSVAECVRKDRDFVITQESTSPLRACDARLSCSAPADPESHPPLEATIRRLYFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIEAGASSGLEGVHLCLDSYFDAEQLEGTKSMVKGRDGEPRANASEELGEGKRRKIRDVQFLRADCEIPGMQ 484
            MDSVAECVRKDRDFVITQESTSPLRACDARLSCSAPADPESHPPLEATIRRLYFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIEAGASSGLEGVHLCLDSYFDAEQLEGTKSMVKGRDGEPRANASEELGEGKRRKIRDVQFLRADCEIPGMQ
Sbjct:    1 MDSVAECVRKDRDFVITQESTSPLRACDARLSCSAPADPESHPPLEATIRRLYFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIEAGASSGLEGVHLCLDSYFDAEQLEGTKSMVKGRDGEPRANASEELGEGKRRKIRDVQFLRADCEIPGMQ 484          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|299472929|emb|CBN80498.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 291.967 bits (746), Expect = 7.069e-89
Identity = 168/368 (45.65%), Postives = 226/368 (61.41%), Query Frame = 0
Query:   51 RLYFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQ-EKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENI-NVASVSKAKTLQALGTLFGIEA 416
            +LY   + LAPMVRAGTLP RALAL YG D V++EE+IDR+++  VR EN  LGT+D+V    +KG +        FQT P  E+ R+V+Q+GT +   A+ AA+ V+ DVAA+D+NMGCPK+FS+Q GMGAALL  P  AA +V  LR+ L   PVS KIRLL+      +T+ FAR ME+AGACAL+VH+R   D  +  ARWE LRP+V A+ IPVIANGDVY + D+  + A S C+ VMLARP L N S+ +                             P   +LPL +VI+ YL  C  Y+S   N KY V+EM+ +RRHP++++  ++ L LP     +  V+ AKTL  L  L+ + A
Sbjct:    9 QLYRGKVILAPMVRAGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATP------FQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPQVAADIVGTLRRNL-SVPVSVKIRLLETP---GETVEFARRMEKAGACALSVHVRKVGDTPASKARWEELRPVVDAVNIPVIANGDVYTRADMAGIKALSGCSSVMLARPALLNCSIFK-----------------------------PDGHVLPLKEVIQQYLRECFRYDSVYQNAKYTVMEMLTKRRHPDHLKESIS-LGLPGGAPGMREVTPAKTLGQLARLWDVGA 336          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|1012264743|ref|XP_015947068.1| (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Arachis duranensis] >gi|1021583543|ref|XP_016181152.1| tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Arachis ipaensis])

HSP 1 Score: 248.44 bits (633), Expect = 4.192e-75
Identity = 147/363 (40.50%), Postives = 202/363 (55.65%), Query Frame = 0
Query:   53 YFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIE 415
            Y N + LAPMVR GTLPLR LA  YG D+ Y EEIID K+++C R  N  +GT DFV     KG  G     +VF+T  QE+ RVVFQ+GT +   A+ AA+LV  DVAAID+NMGCPK FS+  GMG+ALL  P     ++  LR+ L   PV+CKIRLL +      T+  AR +E+ G  AL VH R   D+  DPA+W  +  +V+AL+IPVIANGDV+   D++++ +A+  A VM+AR  L+N S+                                P   LP  DV R YL  C  +++ + + K  + EMI+          H + LE PE     +V+K++++  L  L+G E
Sbjct:    3 YNNKLVLAPMVRVGTLPLRLLAAQYGADITYGEEIIDHKILKCERRVNELIGTTDFV----EKGTEG-----VVFRTCDQERNRVVFQIGTSDAVRALSAAQLVAKDVAAIDVNMGCPKSFSVHGGMGSALLSKPDLIHDILTTLRRNLS-TPVTCKIRLLKSP---NDTVELARRIEKTGVSALAVHGRKVPDRPRDPAKWSEIADIVSALSIPVIANGDVFEYNDIQRIKSATGAASVMVARGALWNASVFL------------------------------PEGELPYEDVKREYLRKCILWDNDLKSTKQTIKEMIM----------HYSCLEFPEG---KAVNKSESMADLAELYGQE 309          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|672135679|ref|XP_008791512.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Phoenix dactylifera] >gi|672135681|ref|XP_008791513.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Phoenix dactylifera] >gi|672135683|ref|XP_008791514.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Phoenix dactylifera])

HSP 1 Score: 248.054 bits (632), Expect = 4.557e-75
Identity = 147/363 (40.50%), Postives = 204/363 (56.20%), Query Frame = 0
Query:   53 YFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIE 415
            Y N + LAPMVR GTLP R LA+ YG D+ Y EEIID K+++C R  N +LG IDFV  G         +  +VF+T  +E+ RVVFQ+GT N   A+ AA++V  DVAAID+NMGCPK FSI  GMGAALL NP     ++  LR+ L    V+CKIRLL++S     T+  AR +E+ G  AL +H R  +D+  DPA+W  +  +VA+L+IPVIANGDV+  ED  ++  A+  + VM+AR  L+N S+          C +   G  S E                  DV R Y+  C  +++ + + K+ + EMI           H + LEL E     +V K++T   L T++G E
Sbjct:    3 YRNKLVLAPMVRVGTLPFRLLAVQYGADITYGEEIIDHKMVKCERHVNESLGAIDFVERG---------TNSVVFRTCCEERDRVVFQMGTANAVRALTAAQIVCKDVAAIDINMGCPKSFSISGGMGAALLSNPELIHDILTTLRRNLD-TVVTCKIRLLNSS---QDTIELARRIEKTGVSALAIHGRRVKDRPRDPAKWNEIADVVASLSIPVIANGDVFEYEDFGRIKDATGASSVMVARGALWNASIF---------CAK---GKSSWE------------------DVKREYVRKCILWDNDIKSTKHTLKEMIT----------HYSSLELAEG---KAVIKSETTADLATIYGEE 309          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|902232432|gb|KNA22624.1| (hypothetical protein SOVF_031710 [Spinacia oleracea])

HSP 1 Score: 247.284 bits (630), Expect = 7.804e-75
Identity = 148/363 (40.77%), Postives = 207/363 (57.02%), Query Frame = 0
Query:   53 YFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIE 415
            Y N + LAPMVR GTLPLR LA  YG D+ Y EE+ID KL++C R  N  LGTID V          +E++ +VF+T P+E+ RVVFQ+GT +   A++AA+LV +DVAAID+NMGCP+ FSI  GMGAALL  P T   ++  L++ L + PV+CKIRLL  S     T+  AR +E+ G  AL VH R   D+  DPA+W  +  +V+AL+IPVIANGDV+  ED++++  A+  + VM+AR  L+N S+                                P   LP  DV + Y+     +++ V + K+ + EMI+          H + L LPE     +V K++TL  L  L+G E
Sbjct:    3 YRNKLVLAPMVRVGTLPLRLLAAEYGADITYGEELIDHKLIKCDRIVNGFLGTIDIVE---------RETQSVVFRTCPEEQSRVVFQIGTSDAIRALKAAQLVCNDVAAIDINMGCPRSFSISGGMGAALLSKPETIHDILTTLKRNL-NTPVTCKIRLLRTS---PDTVELARRIEKTGVSALAVHGRKVLDRPRDPAKWNEIADVVSALSIPVIANGDVFDYEDIQRIKVATGASSVMVARGALWNASIF------------------------------SPQGKLPWEDVKKEYVRKSILWDNDVKSSKHTLKEMIM----------HHSGLGLPEG---KAVIKSETLADLAKLYGEE 309          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|1130627081|ref|XP_019702578.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Elaeis guineensis])

HSP 1 Score: 246.128 bits (627), Expect = 2.989e-74
Identity = 141/340 (41.47%), Postives = 193/340 (56.76%), Query Frame = 0
Query:   53 YFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPE 392
            Y N + LAPMVR GTLP R LA  YG D+ Y EEIID K+++C R  N +LG IDFV  G         +  +VF+T  +EK RVVFQ+GT N   A+ AA++V  DVA +D+NMGCPK FSI  GMGAALL NP     ++  LR+ L  + V+CKIRLL++S     T+  AR +E+ G  AL VH R  +D+  DPA+W  +  +VA+L+IPVIANGDV+  ED  ++  A+  A VM+AR  L+N S+          C +   G  S E                  DV R Y+  C+ +++ + + K+ + EMI+          H + LEL E
Sbjct:    3 YRNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKIVKCERHVNESLGAIDFVERG---------TNNVVFRTCCEEKDRVVFQMGTANAVRALTAAQIVSKDVAVVDINMGCPKSFSISGGMGAALLSNPELIHDILTTLRRNLDTE-VTCKIRLLNSS---QDTVELARRIEKTGVSALAVHGRRVKDRPRDPAKWNEIADVVASLSIPVIANGDVFEYEDFGRIKDATGAASVMVARGALWNASIF---------CAK---GKSSWE------------------DVKREYVRKCTLWDNDIKSTKHTLKEMII----------HYSSLELSE 289          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|1044540748|ref|XP_017441720.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Vigna angularis] >gi|965658700|dbj|BAT75119.1| hypothetical protein VIGAN_01292800 [Vigna angularis var. angularis])

HSP 1 Score: 244.202 bits (622), Expect = 1.836e-73
Identity = 146/361 (40.44%), Postives = 201/361 (55.68%), Query Frame = 0
Query:   53 YFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFG 413
            Y N + LAPMVR GTLP R LA  YG D+ Y EEIID K+++C R  N  +G  DFV  G    DS      +VF+T  +EK RVVFQ+GT +   A+ AA+LV +DVAAID+NMGCPK FS+  GMGAALL  P     ++  LR+ L + PV+CKIRLL +      T+  AR +E+ G  AL VH R   D+  DPA+W  +  +V+AL+IPVIANGDV+  +D E++  A+    VM+AR  L+N S+              +P  K S +                 DV R Y+  C  +++ + + KY V EMI+          H + LEL E     +V+K+++   L  L+G
Sbjct:    3 YRNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMLKCERRINELIGCTDFVEKGT---DS------VVFRTCNEEKDRVVFQIGTSDAVRALTAAQLVCNDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTTLRRNL-NTPVTCKIRLLKSP---HDTVELARRIEKTGVSALTVHGRKVTDRPRDPAKWNEIADVVSALSIPVIANGDVFEYDDFERIKLATGATSVMVARGALWNASMF-------------LPEGKVSHE-----------------DVKREYIRKCILWDNDIKSTKYTVKEMII----------HYSCLELAEG---KAVNKSESTADLAELYG 307          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|672135685|ref|XP_008791515.1| (PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2 [Phoenix dactylifera])

HSP 1 Score: 243.432 bits (620), Expect = 2.501e-73
Identity = 147/363 (40.50%), Postives = 203/363 (55.92%), Query Frame = 0
Query:   53 YFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAPLELPENINVASVSKAKTLQALGTLFGIE 415
            Y N + LAPMVR GTLP R LA+ YG D+ Y EEIID K+++C R  N +LG IDFV  G         +  +VF+T  +E+ RVVFQ+GT N   A+ AA++V  DVAAID+NMGCPK FSI  GMGAALL NP     ++  LR+ L    V+CKIRLL++S     T+  AR +E+ G  AL +H R  +D+  DPA+W  +  +VA+L+IPVIANGDV+  ED  ++  A+  + VM+AR  L+N S+          C +   G  S E                  DV R Y   C  +++ + + K+ + EMI           H + LEL E     +V K++T   L T++G E
Sbjct:    3 YRNKLVLAPMVRVGTLPFRLLAVQYGADITYGEEIIDHKMVKCERHVNESLGAIDFVERG---------TNSVVFRTCCEERDRVVFQMGTANAVRALTAAQIVCKDVAAIDINMGCPKSFSISGGMGAALLSNPELIHDILTTLRRNLD-TVVTCKIRLLNSS---QDTIELARRIEKTGVSALAIHGRRVKDRPRDPAKWNEIADVVASLSIPVIANGDVFEYEDFGRIKDATGASSVMVARGALWNASIF---------CAK---GKSSWE------------------DVKREY---CILWDNDIKSTKHTLKEMIT----------HYSSLELAEG---KAVIKSETTADLATIYGEE 306          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|301091909|ref|XP_002896129.1| (tRNA-dihydrouridine synthase, putative [Phytophthora infestans T30-4] >gi|262094949|gb|EEY53001.1| tRNA-dihydrouridine synthase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 248.44 bits (633), Expect = 3.183e-73
Identity = 138/321 (42.99%), Postives = 192/321 (59.81%), Query Frame = 0
Query:   52 LYFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMI 372
            LY N + L+PMVR+GTLPLR L+L YG D+VY EEIID++++  VR  N  +  +DFV+   R GDS      +VF+T  +E  +VVFQ+GT +   A++AA  V  DVAA+D+NMGCPK FS+Q GMGAALL  P  A  ++K LR+ L + PVSCKIRLL     +  T+  AR +E+AGACA+ VH+R   ++  D A W+ L P+V+AL++PV+ANGDV+  ED+ +L   S  +  ++AR  L NPS+ R         GR                       LP+  V+R YL   +  ++   N KY V+ MI
Sbjct:    4 LYANKVCLSPMVRSGTLPLRLLSLRYGADLVYGEEIIDKRIISAVRVPNDVVNAVDFVS---RNGDS------VVFRTCSEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNL-NIPVSCKIRLLP---EIQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLANGDVFMHEDINKLRKLSGASSFLIARGALANPSIFR-------KEGR-----------------------LPIDQVVREYLKAAAEVDNVFQNTKYNVMRMI 281          
BLAST of EWM25758.1 vs. NCBI_GenBank
Match: gi|669161984|ref|XP_008616554.1| (tRNA-dihydrouridine synthase 2 [Saprolegnia diclina VS20] >gi|530731745|gb|EQC29987.1| tRNA-dihydrouridine synthase 2 [Saprolegnia diclina VS20])

HSP 1 Score: 246.899 bits (629), Expect = 3.527e-73
Identity = 146/366 (39.89%), Postives = 213/366 (58.20%), Query Frame = 0
Query:   51 RLYFNTIALAPMVRAGTLPLRALALSYGCDVVYSEEIIDRKLMQCVREENRALGTIDFVTTGNRKGDSGKESRRLVFQTVPQEKPRVVFQLGTRNPEWAVEAARLVQHDVAAIDLNMGCPKKFSIQDGMGAALLDNPATAASLVKALRQALPHKPVSCKIRLLDASLPMTKTLAFARAMEEAGACALNVHLRTKQDKASDPARWELLRPLVAALAIPVIANGDVYRQEDVEQLLAASHCAGVMLARPVLYNPSLLRTLRFVSPSCGRPVPGDKSSEDAISSTGSSPPLPLLPLMDVIRTYLHLCSCYESHVSNVKYVVLEMIVRRRHPEYVRRHLAP-LELP-ENINVASVSKAKTLQALGTLFGI 414
             LY N + LAPMVRAGTLPLR L+L YG ++VY EEIID+K+ Q  R  N  LGTID+V+    +GDS      +VF+T  +EK  VVFQ+GT     A++AA  V +DVA+ID+NMGCPK FS+Q GMG AL+  P  A+ +VK LR+ L + PVSCKIR+ D+    + T+ FA++ME+AGA A+ +H R   ++  D A W+ L  + +AL +PV+ANGD+Y QED+ ++ A + C+GV++AR  L+N S  R                                 LLP  + IR +L + +  ++   N KY +  M+     P  V     P + LP +++ V  ++  K+ + +  LFG+
Sbjct:    4 NLYENAVCLAPMVRAGTLPLRLLSLRYGANLVYGEEIIDKKIAQTHRVVNDVLGTIDYVSA---QGDS------VVFRTCAEEKDHVVFQIGTPGAVTALKAAETVANDVASIDINMGCPKHFSVQGGMGIALMSKPEVASDIVKTLRRNL-NIPVSCKIRIKDSP---SATIDFAKSMEQAGAAAIAIHCRQPHERPCDDAHWDALPLIPSALNVPVLANGDIYTQEDIARVRAETGCSGVLVARGALHNASCFRQ------------------------------EGLLPYTENIREFLKVAAETDNVFQNTKYSISRML-----PSKVNHLETPSVVLPYDHVTVPDIAATKSNREMFALFGL 321          
The following BLAST results are available for this feature:
BLAST of EWM25758.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107621|gb|EWM25758.1|0.000e+0100.00trna-dihydrouridine synthase 2 [Nannochloropsis ga... [more]
gi|299472929|emb|CBN80498.1|7.069e-8945.65conserved unknown protein [Ectocarpus siliculosus][more]
gi|1012264743|ref|XP_015947068.1|4.192e-7540.50tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [A... [more]
gi|672135679|ref|XP_008791512.1|4.557e-7540.50PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P... [more]
gi|902232432|gb|KNA22624.1|7.804e-7540.77hypothetical protein SOVF_031710 [Spinacia olerace... [more]
gi|1130627081|ref|XP_019702578.1|2.989e-7441.47PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P... [more]
gi|1044540748|ref|XP_017441720.1|1.836e-7340.44PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P... [more]
gi|672135685|ref|XP_008791515.1|2.501e-7340.50PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P... [more]
gi|301091909|ref|XP_002896129.1|3.183e-7342.99tRNA-dihydrouridine synthase, putative [Phytophtho... [more]
gi|669161984|ref|XP_008616554.1|3.527e-7339.89tRNA-dihydrouridine synthase 2 [Saprolegnia diclin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4937rna4937Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications