EWM25814.1, cds4882 (CDS) Nannochloropsis gaditana

Overview
NameEWM25814.1
Unique Namecds4882
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:615446..616516 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25814.1
Productrna terminal phosphate cyclase-like 1
Orig transcript idgnl|cribi|Naga_100021g73.8757.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:615446..616516 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0042254ribosome biogenesis
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: INTERPRO
TermDefinition
IPR013792RNA3'P_cycl/enolpyr_Trfase_a/b
IPR020719RNA3'_term_phos_cycl-like_CS
IPR023797RNA3'_phos_cyclase_dom
IPR016443RNA3'_term_phos_cyc_type_2
IPR013791RNA3'-term_phos_cycl_insert
IPR000228RNA3'_term_phos_cyc
Homology
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|585107681|gb|EWM25814.1| (rna terminal phosphate cyclase-like 1 [Nannochloropsis gaditana])

HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query:    1 MSTMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFGAEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            MSTMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFGAEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT
Sbjct:    1 MSTMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFGAEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|669136812|ref|XP_008603974.1| (18S rRNA biogenesis protein RCL1 [Saprolegnia diclina VS20] >gi|530744309|gb|EQC42551.1| 18S rRNA biogenesis protein RCL1 [Saprolegnia diclina VS20])

HSP 1 Score: 460.685 bits (1184), Expect = 1.708e-159
Identity = 221/355 (62.25%), Postives = 273/355 (76.90%), Query Frame = 0
Query:    3 TMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            T+KF+GC +FRQRLVCATLSGR +LI +IR+E +EPG+ +FE  FLRLL+ LTNG Q+EINETGT L+Y PG IVGG  +HDCG+ R+I WFLE ++ LA FAK+PL  +L G+TND  DVSVD+ KA+ LP++  FG  EG    VKKRG PP GGG V F CPIVR+LR  +L+D G IKR+RGVAYC ++SPQ ANR+V + RG+ N+LLPDVY+++DHYKG   G SPGFGL+LVAE+TTG +L  +  A  G+LPEDV +  S LL EE+++GGCVD+  Q L LLLM L PEDVSKVR G+LT H IQ LR  R+ FGVTFKI+A+ ET TVLLSCLG G +N SKKVT
Sbjct:   23 TLKFQGCAHFRQRLVCATLSGRRILIQNIRAESDEPGITEFEANFLRLLDNLTNGSQIEINETGTSLKYTPGFIVGGTIDHDCGTKRAIGWFLEPLVALAPFAKKPLVATLRGITNDDVDVSVDSFKAITLPLIKHFGLDEGLDFKVKKRGAPPLGGGEVIFRCPIVRQLRSVHLIDDGFIKRIRGVAYCTRVSPQTANRIVDTGRGIFNKLLPDVYIYSDHYKGAESGLSPGFGLSLVAETTTGIVLGAEAAATSGSLPEDVAKTASHLLCEEIQKGGCVDTTNQCLTLLLMTLSPEDVSKVRFGKLTPHSIQFLRHLRDFFGVTFKIKAENETKTVLLSCLGLGFKNLSKKVT 377          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|1173945867|gb|OQR94450.1| (RNA 3'-terminal phosphate cyclase [Achlya hypogyna])

HSP 1 Score: 458.759 bits (1179), Expect = 1.069e-158
Identity = 220/355 (61.97%), Postives = 273/355 (76.90%), Query Frame = 0
Query:    3 TMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            T+KF+GC +FRQRLVCATLSGR +LI +IRSE +EPG+ +FE  FLRLL+ +TNG Q+EINETGT L+Y PG IVGG  EHDCG+ R+I WFLE ++ LA FAK+PL  +L G+TND  DVSVD+ KA+ LP++  FG  EG    VKKRG PP GGG V F CPIVRELR  +LVD G IKR+RGVAYC ++SPQ ANR+V ++RG+ N+LLPDVY+++DHY+G   G SPGF L+LVAE+TTG +L  +  A  G+LPEDV +  S LL EE+++GGCVD+  Q L LLLM L PEDVSKVR G+LT + IQ LR  R+ FGVTFKI+A+ E+ TVLLSCLG G +N SKKVT
Sbjct:   22 TLKFQGCAHFRQRLVCATLSGRRVLIQNIRSESDEPGITEFEANFLRLLDNITNGSQIEINETGTSLKYTPGFIVGGTIEHDCGTKRAIGWFLEPLVCLAPFAKKPLVATLRGITNDDVDVSVDSFKAITLPLIKHFGLDEGLDFKVKKRGAPPEGGGEVIFRCPIVRELRSVHLVDEGFIKRIRGVAYCTRVSPQTANRIVDTSRGIFNKLLPDVYIYSDHYRGAESGLSPGFALSLVAETTTGVVLGAEAAATNGSLPEDVAKSASHLLCEEIQKGGCVDTTNQCLTLLLMTLSPEDVSKVRFGKLTPYSIQFLRHLRDFFGVTFKIKAEAESKTVLLSCLGLGFKNLSKKVT 376          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|1173952905|gb|OQS00483.1| (RNA 3'-terminal phosphate cyclase [Thraustotheca clavata])

HSP 1 Score: 451.44 bits (1160), Expect = 6.478e-156
Identity = 216/355 (60.85%), Postives = 271/355 (76.34%), Query Frame = 0
Query:    3 TMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            T+KF+G  +FRQRLVC+TLSGR ++I +IRSE +EPGL ++E  FLRLL+ LTNG Q+EINETGT L+Y PG IVGG  EHDCG+ R+I WFLE ++ LA FAK+PL  +L G+TND  DVSVD  KA+ LP++  FG  EG    VKKRG PP GGG V F CPIVR+LR  +LVD G IKR+RGVAYC ++SPQ ANR+V ++RG+ N+L+PDVY+++DHY+G   G SPGF L+LVAE+TTG +L  +  A  G+LPEDV +  S LL EE+++GGCVD+  Q L LLLM L PEDVSKVR G+LT + IQ LR  R+ FGVTFKI+AD ++ TVLLSCLG G +N SKKVT
Sbjct:   22 TLKFEGSAHFRQRLVCSTLSGRRIVIQNIRSESDEPGLTEYEANFLRLLDGLTNGSQIEINETGTALKYTPGFIVGGTIEHDCGTKRAIGWFLEPLVCLAPFAKKPLVATLRGITNDDVDVSVDTFKAITLPLIKHFGLDEGLDFKVKKRGAPPEGGGEVTFRCPIVRQLRSIHLVDEGFIKRIRGVAYCTRVSPQTANRIVDTSRGIFNKLIPDVYIYSDHYRGAESGLSPGFALSLVAETTTGVVLGAEAAATSGSLPEDVAKSASHLLCEEIQKGGCVDTSNQCLTLLLMTLSPEDVSKVRFGKLTPYSIQYLRHLRDFFGVTFKIKADNDSKTVLLSCLGLGFKNLSKKVT 376          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|695388071|ref|XP_009519085.1| (hypothetical protein PHYSODRAFT_487939 [Phytophthora sojae] >gi|348683982|gb|EGZ23797.1| hypothetical protein PHYSODRAFT_487939 [Phytophthora sojae])

HSP 1 Score: 450.284 bits (1157), Expect = 1.825e-155
Identity = 217/354 (61.30%), Postives = 268/354 (75.71%), Query Frame = 0
Query:    4 MKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            ++F+GC +FRQRLVCATLSGRPL+I  IRSE+E PGLR FE   LRLL+R+T+G  +EINETGT L+Y PG+++GGR  HDCG+ R++ WFLE +  LA F K PLH +L G+TND  D SVD+ KA  LP+L  FG  EG  L VKKRG PP GGG V F CP+VRELRP +L D G IKR+RGVAY  ++SPQ +NR+V ++RGL N+LLPDVY+++DHYKG   G SPGF L+LVAE+TTG  L  +  A+ G LPEDV  R S  L EE+ +GGCVDS  QALVLL+MALGPEDV+KVR G+LT + I+ LR  R+ FG+TFKI+ D ET TVLLSCLG G +N +KKVT
Sbjct:   17 LRFQGCAHFRQRLVCATLSGRPLIIEDIRSEDENPGLRPFEASLLRLLDRVTSGSHLEINETGTKLKYQPGLVLGGRVAHDCGTGRAVGWFLEVLAALAPFGKLPLHATLDGVTNDHVDSSVDSFKATTLPLLRHFGLEEGLDLVVKKRGAPPLGGGQVVFRCPLVRELRPIHLTDEGFIKRIRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGAESGQSPGFALSLVAETTTGIFLGAEAAAEPGDLPEDVATRASHALCEEISKGGCVDSTNQALVLLMMALGPEDVAKVRFGKLTPYSIECLRHLRDFFGITFKIKPDPETKTVLLSCLGVGFKNLAKKVT 370          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|813185999|ref|XP_012207171.1| (18S rRNA biogenesis protein RCL1 [Saprolegnia parasitica CBS 223.65] >gi|641527871|gb|KDO22133.1| 18S rRNA biogenesis protein RCL1 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 450.284 bits (1157), Expect = 1.850e-155
Identity = 219/355 (61.69%), Postives = 271/355 (76.34%), Query Frame = 0
Query:    3 TMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            T+KF+GC +FRQRLVCATLSGR +LI +IR+E +EPG+ +FE  FLRLL+ LTNG Q+EINETGT L+Y PG IVGG  +HDCG+ R+I WFLE ++ LA FAK+PL  +L G+TND  DVSVD+ KA+ LP++  FG  EG    VKKRG PP GGG V F CPIVR+LR  +LVD G IKR+RGVAYC ++SPQ ANR+V + RG+ N+LLPDVY+++DHYKG   G SPGFGL+LVAE+TTG +L  +  A  G+LPEDV +  S LL EE+++GGCVD+  Q L LLLM L PEDVSKVR G+LT H IQ LR  R+ FGVTFKI+A+ ET TVLLSCLG G +   +KVT
Sbjct:   23 TLKFQGCAHFRQRLVCATLSGRRILIQNIRAESDEPGITEFEANFLRLLDNLTNGSQIEINETGTSLKYTPGFIVGGTIDHDCGTKRAIGWFLEPLVALAPFAKKPLVATLRGITNDDVDVSVDSFKAITLPLIKHFGLDEGLDFKVKKRGAPPLGGGEVIFRCPIVRQLRSVHLVDDGFIKRIRGVAYCTRVSPQTANRIVDTGRGIFNKLLPDVYIYSDHYKGAESGLSPGFGLSLVAETTTGIVLGAEAAATSGSLPEDVAKTASHLLCEEIQKGGCVDTTNQCLTLLLMTLSPEDVSKVRFGKLTPHSIQFLRHLRDFFGVTFKIKAENETKTVLLSCLGLGFK-ICRKVT 376          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|698786724|ref|XP_009826394.1| (18S rRNA biogenesis protein RCL1 [Aphanomyces astaci] >gi|574119222|gb|ETV84702.1| 18S rRNA biogenesis protein RCL1 [Aphanomyces astaci])

HSP 1 Score: 449.514 bits (1155), Expect = 4.583e-155
Identity = 214/355 (60.28%), Postives = 268/355 (75.49%), Query Frame = 0
Query:    3 TMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            T+KFKGC +FRQRL+CATLSGR + I +IR + EEPG+ +FE  FLRLL+ +TNG Q+EINETGTVL+Y PG IVGG  EHDCG+ R+I WFLE ++ LA FAK+PL  +L G+TND  D SVD  KAV +P++  FG  EG    VKKRG PP GGG V F CP VR+L+  +L+D G IKR+RGVAYC ++SPQ ANR+V ++RGL N+LLPDVY+++DHY+G   G SPG+ L+LVAESTTG LL  +  A  G+LPEDV    S LL EE+++GGCVD+  Q L LLLM L PEDVSKVR G+LT + +Q LR  R+ FGVTFKI+AD ++ +VLLSCLG G +N SKKVT
Sbjct:   27 TLKFKGCAHFRQRLICATLSGRRIRIDNIRGDSEEPGITEFEANFLRLLDSITNGSQIEINETGTVLKYTPGFIVGGTIEHDCGTKRAIGWFLEALVALAPFAKRPLVATLKGITNDDVDASVDFFKAVTIPLIKQFGLDEGLDFKVKKRGAPPLGGGEVIFRCPTVRQLKSIHLIDEGFIKRIRGVAYCTRVSPQTANRIVDTSRGLFNKLLPDVYIYSDHYRGTDSGLSPGYALSLVAESTTGVLLGAETAATSGSLPEDVASMASHLLCEEIQKGGCVDTSNQCLALLLMTLSPEDVSKVRFGKLTPYSMQYLRHLRDFFGVTFKIKADHDSKSVLLSCLGIGFKNLSKKVT 381          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|673033502|ref|XP_008870712.1| (18S rRNA biogenesis protein RCL1 [Aphanomyces invadans] >gi|574473574|gb|ETW00577.1| 18S rRNA biogenesis protein RCL1 [Aphanomyces invadans])

HSP 1 Score: 449.514 bits (1155), Expect = 4.991e-155
Identity = 214/355 (60.28%), Postives = 268/355 (75.49%), Query Frame = 0
Query:    3 TMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            T+KFKGC +FRQRL+CATLSGR + I +IR + EEPG+ +FE  FLRLL+ +TNG Q+EINETGTVL+Y PG IVGG  +HDCG+ RSI WFLE ++ LA FAK+PL  +L G+TND  D SVD  KAV +P+L  FG  EG    VKKRG PP GGG V F CP VR+L+  +LV+ G IKR+RGVAYC ++SPQ +NR+V ++RGL N+LLPDVY+++DHY+G   G SPG+ L+LVAE+TTG LL  +  A  G+LPEDV    S LL EE++RGGCVD+  Q L LLLM L PEDVSK+R G+LT + +Q LR  R+ FGVTFKI+AD E+ +VLLSCLG G +N SKKVT
Sbjct:   26 TLKFKGCAHFRQRLICATLSGRRIRIDNIRGDSEEPGISEFEANFLRLLDSITNGSQIEINETGTVLKYAPGFIVGGTIDHDCGTKRSIGWFLEALVALAPFAKRPLVATLKGITNDDVDASVDYFKAVTIPLLKHFGLDEGLDFKVKKRGAPPLGGGEVLFRCPTVRQLKSVHLVEEGFIKRIRGVAYCTRVSPQTSNRIVDTSRGLFNKLLPDVYIYSDHYRGTDSGLSPGYALSLVAETTTGVLLGAETAATSGSLPEDVASMASHLLCEEIQRGGCVDTSNQCLALLLMTLSPEDVSKIRFGKLTPYSMQYLRHLRDFFGVTFKIKADHESKSVLLSCLGIGFKNLSKKVT 380          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|953504086|emb|CEG35187.1| (18s rrna biogenesis protein rcl1 [Plasmopara halstedii])

HSP 1 Score: 445.662 bits (1145), Expect = 1.077e-153
Identity = 214/357 (59.94%), Postives = 271/357 (75.91%), Query Frame = 0
Query:    1 MSTMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            ++ ++F+GC +FRQRL+CA LSGRPL+I +IRSE+E PGL  FE   LRLL+R+T+G ++EINETGT L+  PG+++GG+  HDCG+ R+I WFLE +  LA FAKQPLH +L G+TND  D SVDN KA  LP+L  FG  +G    VKKRG  P GGG V F CP++R+L+  +L + G IKR+RGVAY  ++SPQ +NR+V S+RGL N+LLPDVY+++DH+KG+  GHSPGF L+LVAE+TTG  L  +  A+ G LPEDV  R S  L EE++RGGCVDS  Q +VLLLMALGPEDV+KVRIG+LT H I  LRL RE FGVTFKI+ D ET TVLLSCLG G +N +KKVT
Sbjct:    9 VTVLRFQGCAHFRQRLICAILSGRPLIIENIRSEDENPGLAAFEANLLRLLDRITSGSRLEINETGTKLKLQPGLVLGGQITHDCGTGRAIGWFLEVLAVLAPFAKQPLHATLDGVTNDHIDNSVDNFKATTLPLLRHFGLDDGLDFVVKKRGAQPLGGGQVIFRCPLIRQLKAISLTEEGFIKRIRGVAYSTRVSPQTSNRIVESSRGLFNKLLPDVYIYSDHFKGVESGHSPGFALSLVAETTTGVFLGSEAAAEPGDLPEDVATRASHALCEEIQRGGCVDSTNQTIVLLLMALGPEDVAKVRIGKLTPHSISCLRLLREFFGVTFKIKPDPETKTVLLSCLGVGFKNLAKKVT 365          
BLAST of EWM25814.1 vs. NCBI_GenBank
Match: gi|301114637|ref|XP_002999088.1| (RNA 3'-terminal phosphate cyclase, putative [Phytophthora infestans T30-4] >gi|262111182|gb|EEY69234.1| RNA 3'-terminal phosphate cyclase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 444.506 bits (1142), Expect = 3.015e-153
Identity = 215/356 (60.39%), Postives = 270/356 (75.84%), Query Frame = 0
Query:    2 STMKFKGCNNFRQRLVCATLSGRPLLITHIRSEEEEPGLRDFEGGFLRLLERLTNGCQVEINETGTVLRYVPGIIVGGRHEHDCGSARSISWFLEGILPLAVFAKQPLHLSLSGLTNDSFDVSVDNVKAVILPILAFFG-AEGATLNVKKRGLPPSGGGHVEFSCPIVRELRPCNLVDAGLIKRVRGVAYCAKISPQFANRVVTSARGLLNRLLPDVYVHTDHYKGLAGGHSPGFGLTLVAESTTGCLLAVDVHAKEGALPEDVGERGSALLLEEVRRGGCVDSVGQALVLLLMALGPEDVSKVRIGQLTMHGIQTLRLAREAFGVTFKIRADTETGTVLLSCLGSGVRNFSKKVT 356
            + ++F+GC +FRQRLVCATLSGRPL+I  IRSE+E PGL  FE   LRLL+R+T+G  +EINETGT L++ PG+++GGR  HDCG+ R++ WFLE +  LA FAK PLH +L G+TND  D SVD+ KA  LP+L  FG  EG  L VKKRG PP GGG V F CP+VR+L+  +LVD G IKRVRGVAY  ++SPQ +NR+V ++RGL N+LLPDVY+++DHYKG   G SPGF L+LVAE+TTG  L  +  A+ G LPEDV  R S  + EE+++GGCVDS  QALVLLLMALGPEDV+KVR+G+LT + I+ LR  R+ FGV FKI+ D ET TVLLSCLG G +N +KKVT
Sbjct:   11 TVLRFRGCAHFRQRLVCATLSGRPLIIEDIRSEDENPGLTAFEASLLRLLDRVTSGSHLEINETGTKLKFQPGLVLGGRITHDCGTGRAVGWFLEVLAALAPFAKLPLHATLDGVTNDHVDSSVDSFKATTLPLLRHFGLEEGLDLVVKKRGAPPLGGGQVIFRCPLVRQLKAIHLVDEGFIKRVRGVAYSTRVSPQTSNRIVETSRGLFNKLLPDVYIYSDHYKGNESGQSPGFALSLVAETTTGVFLGAEAAAEPGDLPEDVATRASHAMCEEIQKGGCVDSTNQALVLLLMALGPEDVAKVRVGKLTPYSIECLRHLRDFFGVIFKIKPDPETKTVLLSCLGVGFKNLAKKVT 366          
The following BLAST results are available for this feature:
BLAST of EWM25814.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107681|gb|EWM25814.1|0.000e+0100.00rna terminal phosphate cyclase-like 1 [Nannochloro... [more]
gi|669136812|ref|XP_008603974.1|1.708e-15962.2518S rRNA biogenesis protein RCL1 [Saprolegnia dicl... [more]
gi|1173945867|gb|OQR94450.1|1.069e-15861.97RNA 3'-terminal phosphate cyclase [Achlya hypogyna... [more]
gi|1173952905|gb|OQS00483.1|6.478e-15660.85RNA 3'-terminal phosphate cyclase [Thraustotheca c... [more]
gi|695388071|ref|XP_009519085.1|1.825e-15561.30hypothetical protein PHYSODRAFT_487939 [Phytophtho... [more]
gi|813185999|ref|XP_012207171.1|1.850e-15561.6918S rRNA biogenesis protein RCL1 [Saprolegnia para... [more]
gi|698786724|ref|XP_009826394.1|4.583e-15560.2818S rRNA biogenesis protein RCL1 [Aphanomyces asta... [more]
gi|673033502|ref|XP_008870712.1|4.991e-15560.2818S rRNA biogenesis protein RCL1 [Aphanomyces inva... [more]
gi|953504086|emb|CEG35187.1|1.077e-15359.9418s rrna biogenesis protein rcl1 [Plasmopara halst... [more]
gi|301114637|ref|XP_002999088.1|3.015e-15360.39RNA 3'-terminal phosphate cyclase, putative [Phyto... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4894rna4894Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications