EWM25822.1, cds4878 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|585107689|gb|EWM25822.1| (phosphoadenosine phosphosulfate reductase [Nannochloropsis gaditana]) HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query: 1 MKTTVVALLATGLSAATAFVLPTGPQPAVKLNRQQGLVSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
MKTTVVALLATGLSAATAFVLPTGPQPAVKLNRQQGLVSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK
Sbjct: 1 MKTTVVALLATGLSAATAFVLPTGPQPAVKLNRQQGLVSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|298709971|emb|CBJ31693.1| (Phosphoadenylyl-sulfate reductase (thioredoxin) [Ectocarpus siliculosus]) HSP 1 Score: 442.965 bits (1138), Expect = 2.758e-154 Identity = 212/317 (66.88%), Postives = 244/317 (76.97%), Query Frame = 0
Query: 1 MKTTV--VALLATGLSAATAFVLPTGP--------QPAVKLNRQQGLVSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
MKT++ ++LLA G A AFV P P + Q V MGLN EL +PRDF IP GT YG+G+D+ +NK E+ + LE QL+ K V KK P+FTTALIAGDCV+LD IAKAGLLDKI++VF+DT+FLFPE+LDFL EVEEHYGFKA +YHC DC TQ+ FYDKYG DYWMEDIDQYD KCKVEPL RALKE+ T+AWINGRRRDHG ERA+LPVWEG K NP++FW+FEDCW YLRKHNVPYHPLHDVGFSSLGDMQST KVPLE W +Y GERSGRF+G+ NKDGS KTECGIH+K
Sbjct: 1 MKTSLAFLSLLAAG---ADAFV-PAAPVLSTRAAASSSATSAVQHVPVRMGLNPELAANFPRDFATIPKGTDYGEGKDAEMNKLFEEVRMSNLESQLADSFAKLVAEKKNPIFTTALIAGDCVILDAIAKAGLLDKIKVVFVDTYFLFPESLDFLHEVEEHYGFKASIYHCVDCETQQDFYDKYGEDYWMEDIDQYDKKCKVEPLMRALKEAETEAWINGRRRDHGFERAALPVWEGTKFNPLSFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 313
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|551656017|ref|XP_005830782.1| (hypothetical protein GUITHDRAFT_95252, partial [Guillardia theta CCMP2712] >gi|428174909|gb|EKX43802.1| hypothetical protein GUITHDRAFT_95252, partial [Guillardia theta CCMP2712]) HSP 1 Score: 293.893 bits (751), Expect = 1.248e-95 Identity = 154/311 (49.52%), Postives = 194/311 (62.38%), Query Frame = 0
Query: 1 MKTTVVALLATGLSAATAFVLPTGPQPAVKLNRQQGLVSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTL-----NKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHT 306
M+ + + L+ LS A F P P + L + L K ++ + P + + NK + L++LE Q L AV + P+FTTALIAGD V+L + K+GLL K++IVFIDT LFPETL+FL +VE+ YGFKA +Y C T+E F +KYG D ++EDI+ YD KVEPL RAL+ES T WINGRRRD G ERA+L VWE +K+NPIAFWTFEDCW Y+ +H VPYHPLHD G+ SLGDM ST +V EKW Y ER+GRFQ + N DGS KTECGIHT
Sbjct: 1 MRKSCIILVLLSLSVANTFAY--CPTPTIHFK--------SLRSSLGKLTKQESMSRPSKLVLRMQDKLDMFVKEHNKLHLESRLKYLEQQAIDDLILAVAKYENPVFTTALIAGDDVILHILHKSGLLPKVKIVFIDTLHLFPETLEFLEKVEKFYGFKAVIYKAEGCETREEFDEKYGDDIFIEDIETYDKVAKVEPLLRALRESKTKLWINGRRRDQGFERAALEVWEKEKMNPIAFWTFEDCWKYIEQHKVPYHPLHDDGYPSLGDMHSTLRVEKEKWFLYGMERAGRFQNMQNPDGSDKTECGIHT 301
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|560188735|pdb|4BWV|A (Chain A, Structure Of Adenosine 5-prime-phosphosulfate Reductase Apr-b From Physcomitrella Patens >gi|560188736|pdb|4BWV|B Chain B, Structure Of Adenosine 5-prime-phosphosulfate Reductase Apr-b From Physcomitrella Patens) HSP 1 Score: 292.738 bits (748), Expect = 1.628e-95 Identity = 145/255 (56.86%), Postives = 178/255 (69.80%), Query Frame = 0
Query: 57 IPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLL--DKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHT 306
+PV TS + N++ L+ LE Q L+K VE +KP F ALIAGD V+LD + + G +K++I+FIDTF LFPET FL EVEE YGFKA V+H AD +E++ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E K V P+A+W F DCW+YL K+++PYHPLHD GF S+GD+QST VP EKW YAGERSGRFQGLTN DGSAKTECGIH
Sbjct: 25 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIHV 279
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|168016067|ref|XP_001760571.1| (predicted protein [Physcomitrella patens] >gi|22553030|emb|CAD32963.1| phosphoadenosine-phosphosulphate reductase [Physcomitrella patens] >gi|162688268|gb|EDQ74646.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 293.508 bits (750), Expect = 3.182e-95 Identity = 145/255 (56.86%), Postives = 178/255 (69.80%), Query Frame = 0
Query: 57 IPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLL--DKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHT 306
+PV TS + N++ L+ LE Q L+K VE +KP F ALIAGD V+LD + + G +K++I+FIDTF LFPET FL EVEE YGFKA V+H AD +E++ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E K V P+A+W F DCW+YL K+++PYHPLHD GF S+GD+QST VP EKW YAGERSGRFQGLTN DGSAKTECGIH
Sbjct: 68 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIHV 322
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|302755510|ref|XP_002961179.1| (hypothetical protein SELMODRAFT_270214 [Selaginella moellendorffii] >gi|300172118|gb|EFJ38718.1| hypothetical protein SELMODRAFT_270214 [Selaginella moellendorffii]) HSP 1 Score: 291.582 bits (745), Expect = 1.178e-94 Identity = 152/315 (48.25%), Postives = 202/315 (64.13%), Query Frame = 0
Query: 6 VALLATGLSAATAFVLPTGPQPAVKLNRQQGLVS---MGLNAELTKTYPRDFKNIPVGTSYGKGEDSTL-----NKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDK--IEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
+A +A G + P+ +PA R L+ L+ L+K++ R + V + E L N E + L+ LE Q SVL+K +E ++P F ALIAGD V+LD + K G +K ++++FIDTF LFPET FL+ +E+ YGFKA+V+H AD T+E + K+G+D ++ DID+YD CKVEP RAL DA INGRRRDHGAERA L V + K V P+A+W F DCW+YL+K++VPYHPLHD G+ S+GD+QST VP EKW Y GERSGRFQGL+NKDGS KTECGIH++
Sbjct: 1 MAAMALGHHHLSFAAAPSSGRPA----RDSSLLGGNFASLHRILSKSHARVL-HYSVSCAAAVKEKEALDIQQWNDEAYEARLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYGFKARVFHAADFNTKEEYLAKHGSDLYIRDIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPVPKEKWFEYGGERSGRFQGLSNKDGSLKTECGIHSQ 310
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|302766814|ref|XP_002966827.1| (hypothetical protein SELMODRAFT_270602 [Selaginella moellendorffii] >gi|300164818|gb|EFJ31426.1| hypothetical protein SELMODRAFT_270602 [Selaginella moellendorffii]) HSP 1 Score: 289.271 bits (739), Expect = 8.368e-94 Identity = 150/314 (47.77%), Postives = 202/314 (64.33%), Query Frame = 0
Query: 6 VALLATGLSAATAFVLPTGPQPAVKLNRQQGLVS---MGLNAELTKTYPRDFKNIPVGTSYGKGEDS----TLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDK--IEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
+A +A G + P+ +PA R L+ L+ L+K++ R + + K +++ N E + L+ LE Q SVL+K +E ++P F ALIAGD V+LD + K G +K ++++FIDTF LFPET FL+ +E+ Y FKA+V+H AD T+E + K+G+D ++ +ID+YD CKVEP RAL DA INGRRRDHGAERA L V + K V P+A+W F DCW+YL+K++VPYHPLHD G+ S+GD+QST VP EKW Y GERSGRFQGLTNKDGS KTECGIHT+
Sbjct: 1 MAAMALGHHHLSFAAAPSSGRPA----RDSSLLGGNFASLHRILSKSHARVLHHSVSCAAVVKEKEALDIQQWNDEAYEARLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYDFKARVFHAADFTTKEEYLAKHGSDLYIRNIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPVPKEKWFEYGGERSGRFQGLTNKDGSLKTECGIHTQ 310
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|1026777534|gb|OAE36009.1| (hypothetical protein AXG93_93s1480 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 277.33 bits (708), Expect = 9.160e-89 Identity = 127/240 (52.92%), Postives = 167/240 (69.58%), Query Frame = 0
Query: 72 NKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLD--KIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHT 306
NK++ + L LE Q + L+K +E ++P F ALI GD V+LD +++ G D K++I+FIDT LFPETL FL VE+ YG KA ++ A ++ + +KYG+D ++ D+D+YD CKVEP RALK DA +NGRRRDHGAERA L ++EG KV P+A+W F DCW+Y+ K+ +PYHPLHD G+ S+GDMQST VP +W Y GERSGRFQG+ NKDGS KTECGIH
Sbjct: 85 NKQVRDERLSILETQALNALRKTIENYQRPAFPCALITGDVVILDLLSRVGAFDDEKVKIIFIDTLHLFPETLTFLAAVEKRYGCKAHIFQAAGMANKQEYDEKYGSDLFIRDVDEYDRICKVEPFSRALKTLEVDAMVNGRRRDHGAERAHLEIFEGGDMAKVQPLAYWEFRDCWDYIEKYQLPYHPLHDQGYPSIGDMQSTLPVPKSQWFEYGGERSGRFQGIKNKDGSTKTECGIHA 324
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|971511197|dbj|GAQ87007.1| (Phosphoadenosine phosphosulfate reductase [Klebsormidium nitens]) HSP 1 Score: 269.626 bits (688), Expect = 4.157e-86 Identity = 129/240 (53.75%), Postives = 171/240 (71.25%), Query Frame = 0
Query: 72 NKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDK--IEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHT 306
NK+ + Q LE LE Q LK A+ ++P F ALIAGD V+LD +A++G K ++++F+DTF LF ET FLR++E YGF+++V+ A ++ + +G D ++ DID+YD CKVEP RALK DA INGRRRDHGAERA + ++EG KVNP+A+W F DCW+Y++K+++ YHPLHD G+ S+GD+ ST VP E+W YAGERSGRFQGLTNKDGSAKTECGIH
Sbjct: 51 NKKGKIQRLEHLEEQALETLKHALYDFERPAFPCALIAGDVVILDLLARSGAFSKGLVKVIFVDTFHLFEETHTFLRQLENKYGFESEVFQAAGFASRADYVKVHGPDLYLTDIDEYDRICKVEPFGRALKTLKVDAMINGRRRDHGAERAHIELFEGGDMVKVNPLAYWEFRDCWDYIKKYSLAYHPLHDQGYPSVGDIHSTLPVPREQWFEYAGERSGRFQGLTNKDGSAKTECGIHV 290
BLAST of EWM25822.1 vs. NCBI_GenBank
Match: gi|47059641|gb|AAT09442.1| (phosphoadenosine 5'phosphosulfate reductase [Selaginella lepidophylla]) HSP 1 Score: 262.307 bits (669), Expect = 3.255e-83 Identity = 133/241 (55.19%), Postives = 167/241 (69.29%), Query Frame = 0
Query: 72 NKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDK--IEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
N++I + + L+ Q LKK++ K P F ALI GD VLLD + + G L+ +++VFIDTF LFPET DFL+ VEE Y FKA V+H A +E + K+G+D ++ D+D+YD CKVEP RAL DA INGRRRDHGAERA L V + K V P+A+W F DCWNYL K+N+PYHPLHD G+ S+GD+QST VP EKW Y ERSGRFQG+TNKDGS KTECGIH++
Sbjct: 66 NEQIYEGRQQHLQSQAMDALKKSLSSFKNPTFPCALILGDVVLLDLLHRVGALENGAVKVVFIDTFHLFPETYDFLKTVEERYKFKAHVFHAAGFKNREEYVAKHGSDLYIRDVDEYDKICKVEPFNRALATLEVDAMINGRRRDHGAERAHLEVVQDGKMVSVQPLAYWEFRDCWNYLTKNNIPYHPLHDKGYPSVGDIQSTLPVPKEKWFEYGAERSGRFQGMTNKDGSLKTECGIHSQ 306 The following BLAST results are available for this feature:
BLAST of EWM25822.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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