EWM25820.1, cds4877 (CDS) Nannochloropsis gaditana

Overview
NameEWM25820.1
Unique Namecds4877
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:605296..605500 +
Alignment locationCM002464.1:605575..607181 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25820.1
Productwd repeat-containing protein 76
Orig transcript idgnl|cribi|Naga_100021g67.8763.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:605296..605500 +
CM002464.1supercontigCM002464.1:605575..607181 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006950response to stress
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|585107687|gb|EWM25820.1| (wd repeat-containing protein 76 [Nannochloropsis gaditana])

HSP 1 Score: 1245.72 bits (3222), Expect = 0.000e+0
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0
Query:    1 MAGKVLKRSASGKHESINAERVKTARTRSRLKADPEGPAEGSKDHGPDLPHQYRQENDAAGSRDEKSEVTRRSTRSRPANENTYDEDTQIKAEPPAVPPVESFGASSKKRSGGGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRAPTRRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKKEVWSIAHTNSINNASFSPTGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLFRGPGEERR 603
            MAGKVLKRSASGKHESINAERVKTARTRSRLKADPEGPAEGSKDHGPDLPHQYRQENDAAGSRDEKSEVTRRSTRSRPANENTYDEDTQIKAEPPAVPPVESFGASSKKRSGGGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRAPTRRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKKEVWSIAHTNSINNASFSPTGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLFRGPGEERR
Sbjct:    1 MAGKVLKRSASGKHESINAERVKTARTRSRLKADPEGPAEGSKDHGPDLPHQYRQENDAAGSRDEKSEVTRRSTRSRPANENTYDEDTQIKAEPPAVPPVESFGASSKKRSGGGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRAPTRRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKKEVWSIAHTNSINNASFSPTGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLFRGPGEERR 603          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|919012645|ref|XP_013390792.1| (PREDICTED: WD repeat-containing protein 76-like [Lingula anatina])

HSP 1 Score: 256.144 bits (653), Expect = 3.372e-74
Identity = 173/504 (34.33%), Postives = 263/504 (52.18%), Query Frame = 0
Query:  114 GMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREP-----RAPTRRSARME--GKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTL-ETLNRSEEGGA----DFLVLLKELLLERSNEASAQADRPTKSKPDM-DYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVE---GDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHG-EAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKKE----VWSIAHTNSINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            G+S FE  R++N+R N +    +G+   K        A      + +V  + RGLK    +P     RAP+ R    +  G+E P    E+  + VE     EE  R   GPLT+ ETL  +EE       +FL  LK L          +  +  K +  + ++L++   + L E+ + K+   RI S+ VHPSE  + V A D  G +G+W VE   GD  VF + PH   V  M + P++ S+L S S+DGT+R  D  K  FD L AT +  +DS   C+        NL ++  +G  GL+D+R++ L+  H  + H K V +I  HP ++H F++ STD    +WD R+ K +    V ++ H  ++++A FSP TG +++  C D +L +        F  ++P +    +   +HNN+TGRWL+ F   W P   D  V GS+++PRRIE+F  S          +++ SV SIN FHP+RNILVGANSSGR+H+F
Sbjct:   61 GLSEFERRRLKNLRDNAKFFEEMGIFKAKD-------AFRELSEKPKVKPTERGLKRGAVKPEPLPRRAPSLRLQNKDPAGEELP----ERPTIFVEPT---EEHPRKASGPLTMCETLKNAEENTETSHNNFLSSLKTL-------GEGKEKKSVKVESSLENFLKACKRMKLHEDRVAKVVKDRIFSVAVHPSETRVFVCAGDKWGKIGLWDVESKEGDDGVFLYEPHSRPVNCMFFDPSNASRLYSCSYDGTIRRCDFNKAVFDELYATPE--EDSN-RCSGFDFLDASNLVVSHSDGDVGLVDIRTKGLAAEHMYQCHRKSVKTINVHPVKKHYFLTGSTDGNACIWDIRQMKDKKPVSVDTLPHGRNLSSAFFSPQTGKFIVTCCVDDRLRI--------FEGSTPGEYK-QRCSTRHNNHTGRWLTPFRFMWHPSREDVIVTGSMDRPRRIELFDTSGHLIHTFTDGDYLGSVCSINAFHPTRNILVGANSSGRLHVF 531          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|390332173|ref|XP_797961.3| (PREDICTED: WD repeat-containing protein 76 [Strongylocentrotus purpuratus])

HSP 1 Score: 251.136 bits (640), Expect = 8.581e-72
Identity = 173/501 (34.53%), Postives = 254/501 (50.70%), Query Frame = 0
Query:  114 GMSAFEMERVENIRRNQEMLRALGLGAMKTD-IGLNATAQALQQARKRVAGSNRGLKPAKREPRAPTRRSARMEGKEAP-FYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEE----GGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQV---EGDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFD-LLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPK-----KEVWSIAHTNSINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRI---KHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            G+S +E  R+ENI +N +   +L +   K + + L   AQ  ++  + +    R   P +R PR+   ++   +G E P  + E      V    +RE   R+   P+ ++  N  +E     G DF+  L  L   R  + S  AD    +K    +   L  + +    + K+ P RI S+ VHPS    VVVA D  G +G+W V   EGD  VF F PH   V  +++ P+DP+KL S S+DGTVRC D AK  FD + VA +D    + F        S   +      G+  ++D RSRK        H++   ++  HPT  H F+++STDR   LWD R  K     K +  + H  S+++A FSP TG+ +L T  D K+ +         T ++     T   R     HNN TGRWL+ F   W P+  DA+VVGS+ QPRRIEVFS S G  +     E++ SV SIN+FHP+R++LVG NSSG++H+ 
Sbjct:  103 GLSEYEKRRLENISKNADFFASLDIFKAKENFLALTPQAQKPKRQTRGLKSQKRESAPVERRPRSLRIQNKSPDGAELPENFREPTYTPYVSDVRSRE---RLPSDPVKMDATNVKKEEKTDAGTDFVEGLAAL--ARGEKTSVAADDKDLNK----FASQLQKMKMKPRYMAKVVPDRIFSVAVHPSVDKTVVVAGDKWGKIGLWDVNSTEGDDGVFLFAPHTRPVNCLRFSPSDPNKLFSVSYDGTVRCGDFAKAVFDEVYVADEDEVIWTNFFDFMSADGSSLLVTQNDRTGNVVVVDTRSRKGGENVYNVHSRNAKTVSVHPTMPHYFVTASTDRTAALWDIRSMKGKGTNKPIAEMPHFKSVSSAFFSPITGSKILTTSLDDKISIFE-------TESAKEGKVTGVKRTLWQSHNNWTGRWLTVFRAAWHPRREDAYVVGSMCQPRRIEVFS-SKGKLVHQFFDEYLASVCSINEFHPTRDLLVGGNSSGKLHVI 586          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|961930585|ref|XP_014863809.1| (PREDICTED: WD repeat-containing protein 76 [Poecilia mexicana])

HSP 1 Score: 248.44 bits (633), Expect = 1.094e-70
Identity = 170/500 (34.00%), Postives = 263/500 (52.60%), Query Frame = 0
Query:  113 GGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRA-PTRRSARMEGKEAPFYNEEKLIMEVE-AQSAREEEKRMDEGP---LTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVE---GDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHA---KKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKK-EVWSIAHTN----SINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            GG+SA+E+ER+ENI++NQ  L ++ L   + D+              R   S RGL+P      A P R+S R++ K A     EKL +  E   S   +  R+ + P   L +  +N  +EGG      L++L LE S E   + D         +Y+ +L +L + E+D++K+   RI S   HP   +L++ A D  G +G+W +    GD  V  F PH   V SM +    P++L+S+S+DG++RC+D+ K  FD +   DD  +   F     +SH    L +  + G   ++D R+   S  H   H+   K V  ++ HP +   F+++ + R V ++D R  KK +  ++AH N    +I +A FSP TG  +L +C D+ + ++     +  TA +P   S     I H+  TGRWLSK    WDPK  D FVVGS+++PRR+EVF   SG  + S   E + +V S+  FHP+RN L+G NSSGR+H+F
Sbjct:  124 GGLSAYELERLENIKKNQAFLSSINLLQAREDL----------HQTTRPKPSQRGLRPQSAVKEALPPRKSLRLQNKPA-----EKLTLPKEPIDSLHPDLARVLKKPSGALHMNPIN--QEGGFKLPPELRQLCLEDSKEEQRKLDLK-------EYISALKSLKMGEDDVVKVVKDRIFSAAFHPCSSSLLLAAGDKWGKIGLWNMGAEWGDDGVLLFEPHSRPVGSMAFSRCHPNQLLSASYDGSLRCMDVEKAVFDDVYDIDDGLKTFAF-----MSHDCSTLLVGNWFGEVAIVDRRTPGNS--HESLHSLNTKAVRCVDVHPLQMQYFVAAES-RTVGIYDCRYLKKTQSKAVAHLNGHALTITSAYFSPCTGNRVLTSCLDNHIRIYD---TSSLTAETPLIKS-----ISHDMQTGRWLSKLSAVWDPKQEDCFVVGSMKRPRRVEVFH-ESGRLLHSFMDENLGTVLSVTAFHPTRNALLGGNSSGRMHVF 582          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|961984895|ref|XP_014872136.1| (PREDICTED: WD repeat-containing protein 76 [Poecilia latipinna])

HSP 1 Score: 248.054 bits (632), Expect = 1.359e-70
Identity = 168/499 (33.67%), Postives = 261/499 (52.30%), Query Frame = 0
Query:  113 GGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRA-PTRRSARMEGKEAPFYNEEKLIMEVE-AQSAREEEKRMDEGP---LTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVE---GDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHA---KKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKKEVWSIAHTN----SINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            GG+SA+E+ER+ENI++NQ  L ++ L   + D+              R   S RGL+P      A P R+S R++ K A     EKL +  E   S   +  R+ + P   L +  +N  +EGG      L++L  E S E   + D         +Y+ +L +L + E+D++K+   RI S   HP   +L++ A D  G +G+W +    GD  V  F PH   V SM +    P++L+S+S+DG++RC+D+ K  FD +   DD  +   F     +SH    L +  + G   ++D R+   S  H   H+   K V  ++ HP +   F+++ + R V ++D R  K +  ++AH N    +I +A FSP TG  +L +C D+ + ++     +  TA +P   S     I H+  TGRWLSK    WDPK  D FVVGS+++PRR+EVF   SG  + S   E + +V S+  FHP+RN L+G NSSGR+H+F
Sbjct:  124 GGLSAYELERLENIKKNQAFLSSINLLQAREDL----------HQTTRPKPSQRGLRPQSAVKEALPPRKSLRLQNKPA-----EKLTLPKEPIDSLHPDLARILKKPSGALHMNPIN--QEGGFKLPPELRQLCSEDSKEEQMKLDLK-------EYISALKSLKMREDDVVKVVKDRIFSAAFHPCSSSLLLAAGDKWGKIGLWNMGAEWGDDGVLLFEPHSRPVGSMAFSRCHPNQLLSASYDGSLRCMDVEKAVFDDVYDIDDGLKTFAF-----MSHDCSTLLVGNWFGEVAIVDRRTPGNS--HESLHSLNTKAVRCVDVHPLQMQYFVAAES-RTVGIYDCRYLKTQSKAVAHLNGHALTITSAYFSPCTGNRVLTSCLDNHIRIYD---TSSLTAETPLIKS-----ISHDMQTGRWLSKLSAVWDPKQEDCFVVGSMKRPRRVEVFH-ESGRLLHSFMDENLGTVLSVTAFHPTRNALLGGNSSGRMHVF 581          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|617453098|ref|XP_007569297.1| (PREDICTED: WD repeat-containing protein 76 [Poecilia formosa])

HSP 1 Score: 246.514 bits (628), Expect = 5.163e-70
Identity = 169/500 (33.80%), Postives = 262/500 (52.40%), Query Frame = 0
Query:  113 GGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRA-PTRRSARMEGKEAPFYNEEKLIMEVE-AQSAREEEKRMDEGP---LTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVE---GDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHA---KKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKK-EVWSIAHTN----SINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            GG+SA+E+ER+ENI++NQ  L ++ L   + D+              R   S RGL+P      A P R+S R++ K A     EKL +  E   S   +  R+ + P   L +  +N  +EGG      L++L  E S E   + D         +Y+ +L +L + E+D++K+   RI S   HP   +L++ A D  G +G+W +    GD  V  F PH   V SM +    P++L+S+S+DG++RC+D+ K  FD +   DD  +   F     +SH    L +  + G   ++D R+   S  H   H+   K V  ++ HP +   F+++ + R V ++D R  KK +  ++AH N    +I +A FSP TG  +L +C D+ + ++     +  TA +P   S     I H+  TGRWLSK    WDPK  D FVVGS+++PRR+EVF   SG  + S   E + +V S+  FHP+RN L+G NSSGR+H+F
Sbjct:  124 GGLSAYELERLENIKKNQAFLSSINLLQAREDL----------HQTTRPKPSQRGLRPQSAVKEALPPRKSLRLQNKPA-----EKLTLPKEPIDSLHPDLARILKKPSGALHMNPIN--QEGGFKLPPELRQLCSEDSKEEQMKLDLK-------EYISALKSLKMGEDDVVKVVKDRIFSAAFHPCSSSLLLAAGDKWGKIGLWNMGAEWGDDGVLLFEPHSRPVGSMAFSRCHPNQLLSASYDGSLRCMDVEKAVFDDVYDIDDGLKTFAF-----MSHDCSTLLVGNWFGEVAIVDRRTPGNS--HESLHSLNTKAVRCVDVHPLQMQYFVAAES-RTVGIYDCRYLKKTQSKAVAHLNGHALTITSAYFSPCTGNRVLTSCLDNHIRIYD---TSSLTAETPLIKS-----ISHDMQTGRWLSKLSAVWDPKQEDCFVVGSMKRPRRVEVFH-ESGRLLHSFMDENLGTVLSVTAFHPTRNALLGGNSSGRMHVF 582          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|928034623|ref|XP_013865870.1| (PREDICTED: WD repeat-containing protein 76 [Austrofundulus limnaeus])

HSP 1 Score: 241.121 bits (614), Expect = 1.837e-68
Identity = 171/509 (33.60%), Postives = 256/509 (50.29%), Query Frame = 0
Query:  110 RSGGGMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLK--PAKREPRAPTRRSARMEGKEA------PFYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMD-YLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVE---GDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHGEAHA---KKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPKKE----VWSI-AHTNSINNASFSP-TGAYLLITCQDH--KLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            + G G+SA+E+ER+ENI++NQ  L ++ L          AT +  Q  R +   S RGL+  P  +E   P R+S R++ KEA      P  +   ++ +V     +    +   GPL +  +N  E    DF  L  ELL   S EA+ +     K K D++ Y  SL  + L E+ ++K+   R+ S   HP   +L++ A D  G +G+W      GD  V  F PH   V  M +    P++L+S S+DG++RC+D+ K  FD +   DD  +   F     +SH    L +    G   ++D R+   S  H   H+   K +  +  HP + H F  + + RVV+++D R  KK     V  +  HT SI +A FSP TG  +L TC D   ++Y  +    +P   +           I+HN  TGRWLSK    WDPK  D FVVGS+ +PRR++VF        +   SE +N+V S+  FHPSRN L+G N+SGR+H+F
Sbjct:   75 KYGNGLSAYELERLENIKQNQAFLSSINL--------FQATDELKQLTRPK--ASQRGLRSQPYVKEV-LPPRKSLRLQNKEAEMLELPPEPSGRLIVRDVSDALLKPSLVKKPAGPLPMNPVNVEE----DF-KLPSELLKLCSEEATER-----KMKLDLNEYCSSLKKMRLTEDSVVKVVKDRVFSAAFHPCSSSLLLAAGDKLGKVGLWNYGADWGDDGVLLFEPHTRPVCCMAFSTFRPTQLLSLSYDGSLRCMDVEKAVFDDVYEIDDGLKTFAF-----MSHDCSTLLVGNLYGEVSIVDRRTPGTS--HESLHSMDPKTLRCVSVHPLQMHYFAVAES-RVVSIYDSRHLKKTKNHAVSHLHGHTKSIASAYFSPCTGNRVLTTCMDDCIRIYDTSSMTESPLLKS-----------IRHNVQTGRWLSKLSAVWDPKQEDCFVVGSMMRPRRVQVFHERGQVLHSYTDSENLNTVLSVTAFHPSRNALLGGNASGRLHVF 543          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|1207942345|ref|XP_021360899.1| (WD repeat-containing protein 76-like [Mizuhopecten yessoensis])

HSP 1 Score: 241.506 bits (615), Expect = 2.399e-68
Identity = 166/504 (32.94%), Postives = 264/504 (52.38%), Query Frame = 0
Query:  114 GMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRAPT-RRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTL-ETLNR--SEEGGADFLVLLKELLLERSNEASAQADRPTKS-KPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKE-----VFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVAT--DD--IFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHG-EAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPK------KEVWSIAHTNSINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            G+S +E  R++NI+ N +   +LG+  MK +         L+ +  ++  S+RGLK  K  PR P  RR +    +  P  N              EE  R   GPL + ++L +  S E   D +  LK L+ + +N     + + T S +    +++  S + L  E + K+ P R+ S+ +HPSE  ++VVA D  G +G+W VE  +E     V  + PH   V  +++ P + S L S+S+DGT+R  DL KE FD + AT  DD  + ++  F  AS       +L ++  +G+  L+D R++ +   H    H K + ++  HP   H+F ++S D  V+LWD RK K        +  + H   +++A FSP TG Y+L T  D+K+ +        F +++P    T     KH+N+ GRWL+ F  +W P+  D FVVGS+++PR+IEV+S +          + + SV S+N  HP+RNILVGANSSGR+H+F
Sbjct:   91 GISTYEKRRLKNIKDNADFFSSLGISEMKNE---------LKPSTAKLKASSRGLKKEK-APRVPLPRRISLRLLRVDPSGNSLP--PVPLLPEPLEEHPRKPSGPLEMRKSLLKEGSLEDHNDLMAKLKGLVQKGTNSKEDSSKKTTASTRTTEQFMKGFSKMRLVAERVAKVVPNRVFSLDIHPSEDRVLVVAGDKWGAVGLWDVEPGREHLTDGVLTYTPHSRPVNCLRFSPWNSSHLYSNSYDGTLRVGDLQKEIFDEVYATSEDDYNLLKNFDFLSAS-------SLLVSQQDGTVALVDRRTKGVEAEHEYNLHFKSLRTVSVHPVHTHIFATASNDGTVSLWDHRKLKVGGKKNDPISCVQHAKGVSSAYFSPLTGKYILATSMDNKISV--------FDSSAPEKSLTTFKSFKHDNHVGRWLTGFRASWHPRREDLFVVGSMKRPRQIEVYSNTCEDLATFYDPDNLGSVCSLNAIHPTRNILVGANSSGRLHVF 567          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|1205897245|gb|OWF46751.1| (WD repeat-containing protein 76 [Mizuhopecten yessoensis])

HSP 1 Score: 239.965 bits (611), Expect = 9.858e-68
Identity = 165/503 (32.80%), Postives = 263/503 (52.29%), Query Frame = 0
Query:  114 GMSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRAPT-RRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTL-ETLNR--SEEGGADFLVLLKELLLERSNEASAQADRPTKS-KPDMDYLESLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKE----VFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVAT--DD--IFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSWVHG-EAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRKPK------KEVWSIAHTNSINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
            G+S +E  R++NI+ N +   +LG+  MK +         L+ +  ++  S+RGLK  K  PR P  RR +    +  P  N              EE  R   GPL + ++L +  S E   D +  LK L+ + +N     + + T S +    +++  S + L  E + K+ P R+ S+ +HPSE  ++VVA D  G +G+W V G +     V  + PH   V  +++ P + S L S+S+DGT+R  DL KE FD + AT  DD  + ++  F  AS       +L ++  +G+  L+D R++ +   H    H K + ++  HP   H+F ++S D  V+LWD RK K        +  + H   +++A FSP TG Y+L T  D+K+ +        F +++P    T     KH+N+ GRWL+ F  +W P+  D FVVGS+++PR+IEV+S +          + + SV S+N  HP+RNILVGANSSGR+H+F
Sbjct:   91 GISTYEKRRLKNIKDNADFFSSLGISEMKNE---------LKPSTAKLKASSRGLKKEK-APRVPLPRRISLRLLRVDPSGNSLP--PVPLLPEPLEEHPRKPSGPLEMRKSLLKEGSLEDHNDLMAKLKGLVQKGTNSKEDSSKKTTASTRTTEQFMKGFSKMRLVAERVAKVVPNRVFSLDIHPSEDRVLVVAGDKWGAVGLWDVPGREHLTDGVLTYTPHSRPVNCLRFSPWNSSHLYSNSYDGTLRVGDLQKEIFDEVYATSEDDYNLLKNFDFLSAS-------SLLVSQQDGTVALVDRRTKGVEAEHEYNLHFKSLRTVSVHPVHTHIFATASNDGTVSLWDHRKLKVGGKKNDPISCVQHAKGVSSAYFSPLTGKYILATSMDNKISV--------FDSSAPEKSLTTFKSFKHDNHVGRWLTGFRASWHPRREDLFVVGSMKRPRQIEVYSNTCEDLATFYDPDNLGSVCSLNAIHPTRNILVGANSSGRLHVF 566          
BLAST of EWM25820.1 vs. NCBI_GenBank
Match: gi|558203927|ref|XP_006132165.1| (PREDICTED: WD repeat-containing protein 76 [Pelodiscus sinensis])

HSP 1 Score: 239.195 bits (609), Expect = 3.976e-67
Identity = 155/495 (31.31%), Postives = 264/495 (53.33%), Query Frame = 0
Query:  115 MSAFEMERVENIRRNQEMLRALGLGAMKTDIGLNATAQALQQARKRVAGSNRGLKPAKREPRAPTRRSARMEGKEAPFYNEEKLIMEVEAQSAREEEKRMDEGPLTLETLNRSEEGGADFLVLLKELLLERSNEASAQADRPTKSKPDMDYLE----SLSALTLAEEDILKLTPARISSMVVHPSERTLVVVAADVDGHLGVWQVEGDKE--VFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDLLVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLSW-VHGEAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDR--KP---KKEVWSIAHTNSINNASFSP-TGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQPRRIEVFSASSGFQIASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLFR 596
            +SA+E +R++NI  N     +L L        L + ++  + A KR +   + +KP K E     RRS R++  +       ++  + E ++  +E +++  GPL + T N+S+E    FL    ++             +PT ++  +  +E    SLS + L+E+ + K+   RI S+ +HPSE   +V A D  G +G+W +    E  ++ F PH   V+ M + P +P+ L+S SHDGTVRC D+ +  F+ +  +    +++  +    ++ +  +L +  ++G   ++D R+   S  +    ++K   ++  HP     FI++    V  ++D R  KP   K  ++   HT S+ +A FSP TG  ++ TC D KL ++     +  +AA P  + TA   I+HNNNTGRWL++F   WDPK  D FVVGS+ +PR+IE+F A+     +    +++ SV SIN  HP++NILVG NSSGR+H+F+
Sbjct:  135 LSAYERKRLKNIMENANFFASLKL--------LESASRLREIATKRQSHGIKRVKPKKTECETVRRRSMRLQKVDPSGVPLPEIPAQPEPET--DEYRQLPPGPLPMVTANQSKELTDTFLDTWTQI----------SQIKPTDTEKHLCNIERYKASLSRMILSEDAVTKVVKNRIYSVAIHPSESRTLVAAGDKSGQIGLWDLNSKSEDGIYVFIPHSQPVSCMYFSPCNPAHLLSLSHDGTVRCGDVTRAVFEEVYRS----EENSLSSFDFLTDNTSSLVVGQWDGDVAIVDRRTPGTSSELTANVNSKTTRTVHVHPVNRQYFIAAGAVNV-GVYDTRYLKPNGNKPILFLSGHTKSVASAYFSPITGHRVVTTCADDKLRVYD---TSSLSAAIP--VVTA---IRHNNNTGRWLTRFRAVWDPKQEDCFVVGSMARPRQIEIFQATGKLLHSFYNEDYLGSVCSINAVHPTKNILVGGNSSGRLHVFK 596          
The following BLAST results are available for this feature:
BLAST of EWM25820.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107687|gb|EWM25820.1|0.000e+0100.00wd repeat-containing protein 76 [Nannochloropsis g... [more]
gi|919012645|ref|XP_013390792.1|3.372e-7434.33PREDICTED: WD repeat-containing protein 76-like [L... [more]
gi|390332173|ref|XP_797961.3|8.581e-7234.53PREDICTED: WD repeat-containing protein 76 [Strong... [more]
gi|961930585|ref|XP_014863809.1|1.094e-7034.00PREDICTED: WD repeat-containing protein 76 [Poecil... [more]
gi|961984895|ref|XP_014872136.1|1.359e-7033.67PREDICTED: WD repeat-containing protein 76 [Poecil... [more]
gi|617453098|ref|XP_007569297.1|5.163e-7033.80PREDICTED: WD repeat-containing protein 76 [Poecil... [more]
gi|928034623|ref|XP_013865870.1|1.837e-6833.60PREDICTED: WD repeat-containing protein 76 [Austro... [more]
gi|1207942345|ref|XP_021360899.1|2.399e-6832.94WD repeat-containing protein 76-like [Mizuhopecten... [more]
gi|1205897245|gb|OWF46751.1|9.858e-6832.80WD repeat-containing protein 76 [Mizuhopecten yess... [more]
gi|558203927|ref|XP_006132165.1|3.976e-6731.31PREDICTED: WD repeat-containing protein 76 [Pelodi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4889rna4889Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications