EWM25806.1, cds4869 (CDS) Nannochloropsis gaditana

Overview
NameEWM25806.1
Unique Namecds4869
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:575871..582482 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25806.1
Productbromodomain containing protein
Orig transcript idgnl|cribi|Naga_100021g57.8749.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:575871..582482 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR001487Bromodomain
IPR001965Znf_PHD
Homology
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|585107673|gb|EWM25806.1| (bromodomain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 4522.61 bits (11729), Expect = 0.000e+0
Identity = 2203/2203 (100.00%), Postives = 2203/2203 (100.00%), Query Frame = 0
Query:    1 MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMASELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSRNRMEGSAGKEVDDRDSEAGKNEETQRLVSAKGAVISENGQARGSYHSATQTVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKSKANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEIRKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKDIDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTLPELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVEYVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLGFSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDGFDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISICSTSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAEDKKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRELDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDYVLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACNIEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPCSACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLWHCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLLWLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGRVSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQKLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLEGQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPGGSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIRKAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRKRNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQKQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRFPFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEGHGVDKNKKNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIPGDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSEDIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDSGGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVALKFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYTLRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDCDSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKEAGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPRLRA 2203
            MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMASELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSRNRMEGSAGKEVDDRDSEAGKNEETQRLVSAKGAVISENGQARGSYHSATQTVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKSKANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEIRKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKDIDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTLPELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVEYVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLGFSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDGFDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISICSTSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAEDKKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRELDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDYVLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACNIEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPCSACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLWHCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLLWLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGRVSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQKLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLEGQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPGGSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIRKAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRKRNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQKQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRFPFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEGHGVDKNKKNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIPGDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSEDIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDSGGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVALKFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYTLRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDCDSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKEAGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPRLRA
Sbjct:    1 MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMASELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSRNRMEGSAGKEVDDRDSEAGKNEETQRLVSAKGAVISENGQARGSYHSATQTVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKSKANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEIRKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKDIDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTLPELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVEYVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLGFSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDGFDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISICSTSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAEDKKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRELDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDYVLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACNIEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPCSACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLWHCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLLWLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGRVSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQKLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLEGQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPGGSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIRKAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRKRNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQKQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRFPFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEGHGVDKNKKNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIPGDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSEDIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDSGGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVALKFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYTLRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDCDSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKEAGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPRLRA 2203          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|553196436|ref|XP_005856344.1| (bromodomain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292724|gb|EKU20026.1| bromodomain containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 4517.99 bits (11717), Expect = 0.000e+0
Identity = 2201/2203 (99.91%), Postives = 2203/2203 (100.00%), Query Frame = 0
Query:    1 MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMASELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSRNRMEGSAGKEVDDRDSEAGKNEETQRLVSAKGAVISENGQARGSYHSATQTVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKSKANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEIRKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKDIDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTLPELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVEYVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLGFSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDGFDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISICSTSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAEDKKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRELDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDYVLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACNIEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPCSACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLWHCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLLWLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGRVSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQKLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLEGQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPGGSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIRKAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRKRNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQKQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRFPFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEGHGVDKNKKNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIPGDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSEDIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDSGGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVALKFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYTLRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDCDSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKEAGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPRLRA 2203
            MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMASELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSRNRMEGSAGKEVDDRDSEAGKNEETQRLVSA+GAVISENGQARGSYHSATQTVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKSKANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEIRKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKDIDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTLPELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVEYVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLGFSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDGFDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISICSTSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAEDKKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRELDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDYVLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACNIEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPCSACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLWHCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLLWLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGRVSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQKLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLEGQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPGGSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIRKAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRKRNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQKQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRFPFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEGHGVDKN+KNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIPGDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSEDIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDSGGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVALKFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYTLRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDCDSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKEAGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPRLRA
Sbjct:    7 MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMASELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSRNRMEGSAGKEVDDRDSEAGKNEETQRLVSAQGAVISENGQARGSYHSATQTVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKSKANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEIRKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKDIDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTLPELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVEYVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLGFSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDGFDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISICSTSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAEDKKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRELDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDYVLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACNIEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPCSACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLWHCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLLWLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGRVSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQKLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLEGQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPGGSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIRKAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRKRNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQKQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRFPFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEGHGVDKNRKNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIPGDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSEDIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDSGGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVALKFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAEDKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYTLRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDCDSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKEAGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPRLRA 2209          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|1102217801|ref|XP_019021753.1| (Bromodomain-containing protein [Saitoella complicata NRRL Y-17804] >gi|1063227382|gb|ODQ50640.1| Bromodomain-containing protein [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 77.411 bits (189), Expect = 1.396e-10
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 0
Query: 2096 DEFSKECLALLRQLKSHPSAGPF---IEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKP 2199
            D   K CLA++RQLK + SA PF   ++ +   +P Y TI+  P+ LTT++  ++   Y    E F +DV  +W N  LYNG +  ++  A QLK  FE   + M P
Sbjct:    3 DAQQKYCLAIIRQLKRNKSAVPFNHPVDPIALKIPDYPTIIKNPMDLTTVDTYLKNGYYSEPRE-FIEDVELIWNNCFLYNGSESVISGFAKQLKAMFEKQIKQMPP 108          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|813206473|dbj|GAO52161.1| (hypothetical protein G7K_6245-t3 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 77.0258 bits (188), Expect = 3.170e-10
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 0
Query: 2096 DEFSKECLALLRQLKSHPSAGPF---IEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKP 2199
            D   K CLA++RQLK + SA PF   ++ +   +P Y TI+  P+ LTT++  ++   Y    E F +DV  +W N  LYNG +  ++  A QLK  FE   + M P
Sbjct:  218 DAQQKYCLAIIRQLKRNKSAVPFNHPVDPIALKIPDYPTIIKNPMDLTTVDTYLKNGYYSEPRE-FIEDVELIWNNCFLYNGSESVISGFAKQLKAMFEKQIKQMPP 323          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|813206471|dbj|GAO52159.1| (hypothetical protein G7K_6245-t1 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 77.0258 bits (188), Expect = 3.987e-10
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 0
Query: 2096 DEFSKECLALLRQLKSHPSAGPF---IEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKP 2199
            D   K CLA++RQLK + SA PF   ++ +   +P Y TI+  P+ LTT++  ++   Y    E F +DV  +W N  LYNG +  ++  A QLK  FE   + M P
Sbjct:  346 DAQQKYCLAIIRQLKRNKSAVPFNHPVDPIALKIPDYPTIIKNPMDLTTVDTYLKNGYYSEPRE-FIEDVELIWNNCFLYNGSESVISGFAKQLKAMFEKQIKQMPP 451          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|1127423407|gb|OLL25352.1| (RuvB-like helicase 1 [Neolecta irregularis DAH-3])

HSP 1 Score: 76.2554 bits (186), Expect = 7.650e-10
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 0
Query: 2097 EFSKECLALLRQLKSHPSAGPF---IEDVGDNVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDM 2197
            E SK C A+LRQLK +  AGPF   ++ V  N+P Y  +V  P+ L T++ ++    Y  S+ +F  D+  + ENS ++NG DH VT+MA+ L+  FE   + M
Sbjct:  191 EQSKYCTAVLRQLKKNRDAGPFLHPVDSVKLNIPTYLQVVKNPMDLGTIQKKLDSGQY-VSMHEFKHDLKLIVENSRMFNGPDHKVTQMAMSLESTFEKQMQKM 293          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|1183333451|gb|ORX63147.1| (Bromodomain-containing protein [Hesseltinella vesiculosa])

HSP 1 Score: 74.7146 bits (182), Expect = 1.720e-9
Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 0
Query: 2055 DIFDEESDEGSSISTRESGAQSNGGSRT-RPRTGAVLPIASDDEFSKECLALLRQLKSHPSAGPFIEDVGD---NVPGYSTIVPFPVSLTTLEARVRRQVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKP 2199
            D F+    EGSS     +G Q+   SRT  P T  V+      +  K C+A++R LK H  A PF+  V     N+P Y  I+  P+ LTT+E R+    Y   +  F  D+  L+ N   +NG +  V+ +   ++  FE   R M P
Sbjct:  140 DTFEIIDHEGSSPKPLTNGTQTKKRSRTPSPFTSTVIGTNMTKDQQKYCMAIMRNLKKHRDAAPFLHPVDYVKLNIPDYPNIIKTPIDLTTIEHRLHANEY-LDVGDFVMDIRLLFNNCYKFNGPEAMVSMLCQNVESAFEKSLRQMPP 287          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|591381031|ref|XP_007065053.1| (PREDICTED: bromodomain-containing protein 8 [Chelonia mydas])

HSP 1 Score: 70.4774 bits (171), Expect = 4.667e-8
Identity = 42/146 (28.77%), Postives = 81/146 (55.48%), Query Frame = 0
Query: 2052 GDNDIFDEESD---EGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDE-----FSKECLALLRQLKSHPSAGPFIEDVGD-NVPGYSTIVPFPVSLTTLEARVRR-QVYGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLK 2187
            G++ + +E++D     +S S   S A     S   P +  ++P++  +      F K  L++ + + SH   GPF++ V D   PGY  +V  P+ LT ++ R+ + Q++ T+  +F  D+  +++N+V+YN  DH V RMA++++
Sbjct: 1043 GESHLLEEDNDLSAHDNSDSYSPSRASLVDSSLMSPASSQLVPLSCANSLRHLLFKKTLLSIWKMIASHRYCGPFLKPVSDKQAPGYKDVVRRPMDLTNIKRRLSKGQIWTTA--QFQRDLMLMFQNAVMYNSSDHHVHRMAVEMQ 1186          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|749775132|ref|XP_011142728.1| (PREDICTED: bromodomain adjacent to zinc finger domain protein 1A isoform X1 [Harpegnathos saltator])

HSP 1 Score: 67.3958 bits (163), Expect = 3.554e-7
Identity = 41/130 (31.54%), Postives = 63/130 (48.46%), Query Frame = 0
Query: 1010 PKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEG--EEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQR 1137
            PKE+ + RK  +D   D A+L      T    A+     + +E   ++ DD D E+ +D       +C  CK+  K      ++ C++CP   HL C+ P L+ AP   W C  CK K+R + K R R+R
Sbjct: 1135 PKEKTQKRKRFEDEMEDEAILT---KETRHNRAKRVVTYSDDEAISDQEDDVDEESDQDINVRSENICASCKSGGK------LITCDTCPDRYHLECVEPPLSRAPRGRWSCTKCKDKRRNVTKVRGRER 1255          
BLAST of EWM25806.1 vs. NCBI_GenBank
Match: gi|307203232|gb|EFN82387.1| (Bromodomain adjacent to zinc finger domain protein 1A [Harpegnathos saltator])

HSP 1 Score: 67.3958 bits (163), Expect = 3.584e-7
Identity = 41/130 (31.54%), Postives = 63/130 (48.46%), Query Frame = 0
Query: 1010 PKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAVEEG--EEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEIHLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQR 1137
            PKE+ + RK  +D   D A+L      T    A+     + +E   ++ DD D E+ +D       +C  CK+  K      ++ C++CP   HL C+ P L+ AP   W C  CK K+R + K R R+R
Sbjct: 1134 PKEKTQKRKRFEDEMEDEAILT---KETRHNRAKRVVTYSDDEAISDQEDDVDEESDQDINVRSENICASCKSGGK------LITCDTCPDRYHLECVEPPLSRAPRGRWSCTKCKDKRRNVTKVRGRER 1254          
The following BLAST results are available for this feature:
BLAST of EWM25806.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107673|gb|EWM25806.1|0.000e+0100.00bromodomain containing protein [Nannochloropsis ga... [more]
gi|553196436|ref|XP_005856344.1|0.000e+099.91bromodomain containing protein, partial [Nannochlo... [more]
gi|1102217801|ref|XP_019021753.1|1.396e-1037.38Bromodomain-containing protein [Saitoella complica... [more]
gi|813206473|dbj|GAO52161.1|3.170e-1037.38hypothetical protein G7K_6245-t3 [Saitoella compli... [more]
gi|813206471|dbj|GAO52159.1|3.987e-1037.38hypothetical protein G7K_6245-t1 [Saitoella compli... [more]
gi|1127423407|gb|OLL25352.1|7.650e-1039.42RuvB-like helicase 1 [Neolecta irregularis DAH-3][more]
gi|1183333451|gb|ORX63147.1|1.720e-932.21Bromodomain-containing protein [Hesseltinella vesi... [more]
gi|591381031|ref|XP_007065053.1|4.667e-828.77PREDICTED: bromodomain-containing protein 8 [Chelo... [more]
gi|749775132|ref|XP_011142728.1|3.554e-731.54PREDICTED: bromodomain adjacent to zinc finger dom... [more]
gi|307203232|gb|EFN82387.1|3.584e-731.54Bromodomain adjacent to zinc finger domain protein... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4881rna4881Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications