EWM25804.1, cds4868 (CDS) Nannochloropsis gaditana

Overview
NameEWM25804.1
Unique Namecds4868
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:574749..575068 -
Alignment locationCM002464.1:573881..574469 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25804.1
ProductNTP pyrophosphohydrolase MazG, putative catalytic core
Orig transcript idgnl|cribi|Naga_100021g56.8747.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:574749..575068 -
CM002464.1supercontigCM002464.1:573881..574469 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR004518MazG_cat
Homology
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|585107671|gb|EWM25804.1| (NTP pyrophosphohydrolase MazG, putative catalytic core [Nannochloropsis gaditana])

HSP 1 Score: 617.846 bits (1592), Expect = 0.000e+0
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0
Query:    1 MGQHDEHMAPLASIEFLRQAVQDTLKLSIIPITGLCLDVAHKAGLLAEILQWKSEEVTALVYDDIEFCHKMQIAAGELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADKQLASKRHVIADVTAREQALGRSLRMLLPVRPFIAILMSSLSVIYVSVALLRKR 302
            MGQHDEHMAPLASIEFLRQAVQDTLKLSIIPITGLCLDVAHKAGLLAEILQWKSEEVTALVYDDIEFCHKMQIAAGELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADKQLASKRHVIADVTAREQALGRSLRMLLPVRPFIAILMSSLSVIYVSVALLRKR
Sbjct:    1 MGQHDEHMAPLASIEFLRQAVQDTLKLSIIPITGLCLDVAHKAGLLAEILQWKSEEVTALVYDDIEFCHKMQIAAGELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADKQLASKRHVIADVTAREQALGRSLRMLLPVRPFIAILMSSLSVIYVSVALLRKR 302          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|224006007|ref|XP_002291964.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972483|gb|EED90815.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 114.775 bits (286), Expect = 3.125e-26
Identity = 66/199 (33.17%), Postives = 103/199 (51.76%), Query Frame = 0
Query:   76 GELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGI-KKEGQSL-------GPEDQIFRPPP---WDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQ-------ATPAGDSRS------------------WPQAFKNELGQEIADVFIYLLRFADVCRLDLAKG 238
            G + + +  +    +IDL  + + K++LN RKYP + CKG + KY  Y++QTGI K EGQS          +  + R       +   T+  +   ++ F  ER W ++HTPRN++LAL+GEVGEL E+ Q          + D+ +                  W +   +++GQE+ADV IYL+R AD+C + LAK 
Sbjct:  104 GMIFIQLFTICNVCDIDLCTSVLKKVELNGRKYPVELCKGKSGKYTNYSSQTGITKSEGQSTIDSPIKDNSDVDVSRNDEDGGEEDTTTVEGITFLIRHFANERLWNRFHTPRNIVLALLGEVGELAELFQWSGDVDKTDESNDNTAESVGGNPFAKQSGLMTIGWTEEEVDKVGQEVADVTIYLIRLADICHVSLAKN 302          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|397571680|gb|EJK47910.1| (hypothetical protein THAOC_33342, partial [Thalassiosira oceanica])

HSP 1 Score: 115.931 bits (289), Expect = 3.139e-25
Identity = 64/162 (39.51%), Postives = 92/162 (56.79%), Query Frame = 0
Query:   76 GELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAK 237
            G + +S+  ++A+  I++      KI+LNARKYP   CKG A KY  Y+ QTGI    Q   P  +       D+  T+  +   ++ F  ER W ++HTPRN+ LALIGEVGEL E+ Q        +  +  ++++GQEIAD  IYLLR ADV  + L +
Sbjct:  174 GRVFMSLFTIAANLSINMVDIINRKIELNARKYPVDLCKGKAGKYTKYSDQTGITATNQVTTPTKRK------DSDETVEGITLLIRTFANERQWNRFHTPRNIALALIGEVGELAELFQWKGDVGELALSEEERDKIGQEIADCAIYLLRLADVSHVCLGQ 329          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|1173944746|gb|OQR93448.1| (XTP3-transactivated A protein [Achlya hypogyna])

HSP 1 Score: 99.7525 bits (247), Expect = 2.942e-22
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0
Query:  134 QSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQ--ATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADKQLASKRH 256
            Q   P++Q F P      LT+  L+  +  F  ERNW +YHTPRNLLLA+ GEVGELCE  Q       +  +W  A +  LG+E++DV IYL+R AD C +DL+      I   A K  A+K H
Sbjct:    4 QQPQPKEQRFEPT-----LTLEGLRHKIADFADERNWNQYHTPRNLLLAMTGEVGELCECFQWRNDEGQNPDTWTAADREHLGEELSDVLIYLIRLADRCNVDLSAAALDKIKKNAIKYPAAKVH 123          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|1173949764|gb|OQR97769.1| (XTP3-transactivated protein [Thraustotheca clavata])

HSP 1 Score: 99.3673 bits (246), Expect = 2.976e-22
Identity = 46/86 (53.49%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  152 LTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSR--SWPQAFKNELGQEIADVFIYLLRFADVCRLDL 235
            LT+ DL+  + AF  ERNW +YHTPRNLLLA+ GEVGELCE  Q     D    +W  A +  LG+E++DV IYL+R AD C +DL
Sbjct:    9 LTLEDLRKKIAAFADERNWNQYHTPRNLLLAMTGEVGELCECFQWRGDNDQNPDAWTAAEREHLGEELSDVLIYLIRLADKCNVDL 94          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|569424621|gb|ETO30484.1| (hypothetical protein RFI_06641 [Reticulomyxa filosa])

HSP 1 Score: 103.219 bits (256), Expect = 4.330e-22
Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 0
Query:  116 LAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDS--RSWPQAFKNELGQEIADVFIYLLRFADVCRLDLA 236
            L+HK +  +++  +++   S   E+ +FR       +T+  L+  ++ FV ERNWE++HTPRN+LLAL GE+GELCEI Q     +   +SW       LG+E++DV +YL+R AD+C +DL 
Sbjct:   85 LSHKANLLSSEESLERSNTSNQEENNLFRKD-----VTLEMLRQKMRKFVEERNWEQFHTPRNVLLALTGELGELCEIFQWKGEVEVGLKSWKANEMEHLGEELSDVLLYLVRLADLCNVDLG 202          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|645235564|ref|XP_008224330.1| (PREDICTED: dCTP pyrophosphatase 1-like [Prunus mume])

HSP 1 Score: 96.2857 bits (238), Expect = 3.764e-21
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 0
Query:  149 DARLTIS--DLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSR--SWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGA 247
            D R+ IS  DL   L+ F   R+WEKYH+PRNLLLA++GEVGEL EI Q     D    +W ++ K  LG+E++DV +YL+R AD+C +DL       I   A
Sbjct:   12 DERVNISLKDLSKKLEEFAKARDWEKYHSPRNLLLAMVGEVGELSEIFQWRGEVDKGLPNWEESDKEHLGEELSDVLLYLIRLADICGVDLGDAASKKIVKNA 114          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|658027690|ref|XP_008349275.1| (PREDICTED: dCTP pyrophosphatase 1-like [Malus domestica])

HSP 1 Score: 95.9005 bits (237), Expect = 4.228e-21
Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 0
Query:  151 RLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSR--SWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGA 247
             +++ DL   L+ F   R+WEKYH+PRNLLLA++GEVGEL EI Q     D    +W ++ K  LG+E++DV +YL+R AD+C +DLA      I   A
Sbjct:   16 NISLKDLSKKLEEFAKARDWEKYHSPRNLLLAMVGEVGELSEIFQWRGEVDRGLPNWKESDKEHLGEELSDVLLYLIRLADICGIDLADAASKKIVKNA 114          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|703122577|ref|XP_010102607.1| (hypothetical protein L484_011718 [Morus notabilis] >gi|587905577|gb|EXB93724.1| hypothetical protein L484_011718 [Morus notabilis])

HSP 1 Score: 95.9005 bits (237), Expect = 4.333e-21
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:  152 LTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSR--SWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADK 249
            ++I DL   L+ F   R+WEKYH+PRNLLLA++GEVGEL EI Q     D    +W ++ K  LG+E++DV +YL+R AD+C +DL       I   A K
Sbjct:   18 ISIKDLSKKLEEFAKARDWEKYHSPRNLLLAMVGEVGELSEIFQWRGEVDKGLPNWAKSDKEHLGEELSDVLLYLIRLADICGIDLGDAASKKIVKNAIK 117          
BLAST of EWM25804.1 vs. NCBI_GenBank
Match: gi|657949891|ref|XP_008345383.1| (PREDICTED: dCTP pyrophosphatase 1-like [Malus domestica])

HSP 1 Score: 95.9005 bits (237), Expect = 4.455e-21
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 0
Query:  151 RLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSR--SWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADK 249
             +++ DL   L+ F   R+WEKYH+PRNLLLA++GEVGEL EI Q     D    +W ++ K  LG+E++DV +YL+R AD+C +DLA      I   A K
Sbjct:   16 NISLKDLSKKLEEFAKARDWEKYHSPRNLLLAMVGEVGELSEIFQWRGEVDRGLPNWKESDKEHLGEELSDVLLYLIRLADICGIDLADAASKKIVKNAIK 116          
The following BLAST results are available for this feature:
BLAST of EWM25804.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107671|gb|EWM25804.1|0.000e+0100.00NTP pyrophosphohydrolase MazG, putative catalytic ... [more]
gi|224006007|ref|XP_002291964.1|3.125e-2633.17predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397571680|gb|EJK47910.1|3.139e-2539.51hypothetical protein THAOC_33342, partial [Thalass... [more]
gi|1173944746|gb|OQR93448.1|2.942e-2243.20XTP3-transactivated A protein [Achlya hypogyna][more]
gi|1173949764|gb|OQR97769.1|2.976e-2253.49XTP3-transactivated protein [Thraustotheca clavata... [more]
gi|569424621|gb|ETO30484.1|4.330e-2239.84hypothetical protein RFI_06641 [Reticulomyxa filos... [more]
gi|645235564|ref|XP_008224330.1|3.764e-2146.60PREDICTED: dCTP pyrophosphatase 1-like [Prunus mum... [more]
gi|658027690|ref|XP_008349275.1|4.228e-2145.45PREDICTED: dCTP pyrophosphatase 1-like [Malus dome... [more]
gi|703122577|ref|XP_010102607.1|4.333e-2146.00hypothetical protein L484_011718 [Morus notabilis]... [more]
gi|657949891|ref|XP_008345383.1|4.455e-2145.54PREDICTED: dCTP pyrophosphatase 1-like [Malus dome... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4880rna4880Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications