EWM25794.1, cds4867 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|585107661|gb|EWM25794.1| (nuclear lim interactor-interacting protein [Nannochloropsis gaditana]) HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0 Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0 Query: 1 MPSIKPSPYAQPNTPIASAKRPRTALRRTHGTSRKGAASKGNPTRLQEDLVCSPSPACQLERTSPETGHPCEKKVDVLYAETSSAFYDGSEHDGEDTWKGRVASLFSPVLKFVGGSPEAQGAEGRGKQHGANSGEGGIDGGLHGQENDINRNNRLAQPLSMEESCDEGKDVSPNQLETCGKENEEGLMDVEPVFDDSAASEDGEKVSMKEEEVEDEGMEDEELEVVEEFNPFLFIKQLPPYEHVAIQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQSHLRVHEA 444 MPSIKPSPYAQPNTPIASAKRPRTALRRTHGTSRKGAASKGNPTRLQEDLVCSPSPACQLERTSPETGHPCEKKVDVLYAETSSAFYDGSEHDGEDTWKGRVASLFSPVLKFVGGSPEAQGAEGRGKQHGANSGEGGIDGGLHGQENDINRNNRLAQPLSMEESCDEGKDVSPNQLETCGKENEEGLMDVEPVFDDSAASEDGEKVSMKEEEVEDEGMEDEELEVVEEFNPFLFIKQLPPYEHVAIQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQSHLRVHEA Sbjct: 1 MPSIKPSPYAQPNTPIASAKRPRTALRRTHGTSRKGAASKGNPTRLQEDLVCSPSPACQLERTSPETGHPCEKKVDVLYAETSSAFYDGSEHDGEDTWKGRVASLFSPVLKFVGGSPEAQGAEGRGKQHGANSGEGGIDGGLHGQENDINRNNRLAQPLSMEESCDEGKDVSPNQLETCGKENEEGLMDVEPVFDDSAASEDGEKVSMKEEEVEDEGMEDEELEVVEEFNPFLFIKQLPPYEHVAIQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQSHLRVHEA 444
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|1072237495|gb|OEU22222.1| (hypothetical protein FRACYDRAFT_166268 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 276.944 bits (707), Expect = 6.851e-87 Identity = 130/216 (60.19%), Postives = 166/216 (76.85%), Query Frame = 0 Query: 229 FNPFLFIKQLPPYEHVAIQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQSHLRVHEA 444 FNP+ FIK LP YE+V K P P++LVLDLDETLVHCTVE + D+ FPV+F+G++YQV+VR RPHL EFL ++ K FEV+VFTASQQVYADALLDLIDP + IKHR+FRD+CL VEGN++KDL+VLGRD+ ++VL+DNSP+A+GYQ+DNGIPIESWF+DR+D ELLKL FL L V+DVR ++R FQ++ + +A Sbjct: 98 FNPYAFIKSLPSYENV----KSLCPTAVLPTKDINAKPISLVLDLDETLVHCTVEACDNADLTFPVEFHGMTYQVYVRLRPHLTEFLEKICKKFEVIVFTASQQVYADALLDLIDPDHKYIKHRMFRDSCLSVEGNFLKDLNVLGRDLKKSVLVDNSPHAFGYQVDNGIPIESWFDDRNDTELLKLERFLTTLHGVEDVRTVVRRTFQTYKLIEQA 309
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|1210527104|dbj|GAX14077.1| (hypothetical protein FisN_8Hh087 [Fistulifera solaris]) HSP 1 Score: 272.322 bits (695), Expect = 2.812e-84 Identity = 135/245 (55.10%), Postives = 184/245 (75.10%), Query Frame = 0 Query: 205 KVSMKEEEVEDE---GMEDEELEVVEEFNPFLFIKQLPPYEHVA-IQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEE-LQRVDDVRPLIRTAFQSHLRVHEA 444 +V +EEE D+ ++ +E+ +EFNP+ FI+ LPPY+ ++ ++ +CLP + P+TLVLDLDETLVHC+VEPV D D+VFPVDF+G++YQVHV+KRP+LE FL FEVV+FTASQ++YA+ LL+ IDP + I+HRL+RD+CLPVEGN++KDL VLGRD+A+T+L+DNSP+A+GYQ++NGIPIESWFED DD EL+KL FL + V DVRP++ FQ V+EA Sbjct: 129 RVQSEEEEHSDDCSISIQGQEMPESDEFNPWQFIQSLPPYQEISYLRPNVCLPPKDPQAP-----PITLVLDLDETLVHCSVEPVDDADLVFPVDFHGITYQVHVKKRPYLETFLEACCGKFEVVLFTASQKIYANELLNRIDPEGKYIQHRLYRDSCLPVEGNFLKDLTVLGRDLAQTILVDNSPHAFGYQVENGIPIESWFEDPDDRELIKLERFLRQHCLDVPDVRPILDKKFQCRRLVNEA 368
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|1210529359|dbj|GAX11993.1| (hypothetical protein FisN_8Lh087 [Fistulifera solaris]) HSP 1 Score: 272.322 bits (695), Expect = 3.870e-84 Identity = 135/245 (55.10%), Postives = 184/245 (75.10%), Query Frame = 0 Query: 205 KVSMKEEEVEDE---GMEDEELEVVEEFNPFLFIKQLPPYEHVA-IQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEE-LQRVDDVRPLIRTAFQSHLRVHEA 444 +V +EEE D+ ++ +E+ +EFNP+ FI+ LPPY+ ++ ++ +CLP + P+TLVLDLDETLVHC+VEPV D D+VFPVDF+G++YQVHV+KRP+LE FL FEVV+FTASQ++YA+ LL+ IDP + I+HRL+RD+CLPVEGN++KDL VLGRD+A+T+L+DNSP+A+GYQ++NGIPIESWFED DD EL+KL FL + V DVRP++ FQ V+EA Sbjct: 131 RVHSEEEEHSDDCSISIQGQEMPESDEFNPWQFIQSLPPYQEISYLRPSVCLPPKDPQAP-----PITLVLDLDETLVHCSVEPVEDADLVFPVDFHGITYQVHVKKRPYLETFLEACCGKFEVVLFTASQKIYANELLNRIDPEGKYIQHRLYRDSCLPVEGNFLKDLTVLGRDLAQTILVDNSPHAFGYQVENGIPIESWFEDPDDRELIKLERFLRQHCLDVPDVRPILDKKFQCRRLVNEA 370
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|813204563|ref|XP_012209926.1| (hypothetical protein SPRG_15471 [Saprolegnia parasitica CBS 223.65] >gi|641524853|gb|KDO19381.1| hypothetical protein SPRG_15471 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 270.781 bits (691), Expect = 5.554e-84 Identity = 134/241 (55.60%), Postives = 174/241 (72.20%), Query Frame = 0 Query: 205 KVSMKEEEVEDEGMEDEELEVVEEFNPFLFIKQLPPYEHVA-IQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQSHLRVHEA 444 +V +E +E +D +E+ EFNPF F+K LP YE V + LP++ + + LVLDLDETLVHC+V+ V D D+ FP+D+NG Y V V+KRP++ EFL +VS+ FEVVVFTASQ+VYA+ LL+L+DP + IKHRL+RD CLPVEGNY+KDL+VLGRD+++ +LIDNSP+A+GYQ+DNGIPIESWF D D ELLKLLPFLE L VDDVRP++ FQ + A Sbjct: 108 EVKAADEAPVEEATDDTVVEL--EFNPFYFMKTLPAYEDVQDFVRPVALPKKDASSPK-----VCLVLDLDETLVHCSVDDVADVDLKFPIDYNGTEYTVSVKKRPYMNEFLAQVSEWFEVVVFTASQRVYAETLLNLLDPYGQYIKHRLYRDNCLPVEGNYLKDLNVLGRDLSQVLLIDNSPHAFGYQVDNGIPIESWFSDEADDELLKLLPFLESLAHVDDVRPIVARQFQIQRLIDSA 341
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|669163680|ref|XP_008617402.1| (hypothetical protein SDRG_13097 [Saprolegnia diclina VS20] >gi|530730982|gb|EQC29224.1| hypothetical protein SDRG_13097 [Saprolegnia diclina VS20]) HSP 1 Score: 270.396 bits (690), Expect = 8.166e-84 Identity = 133/233 (57.08%), Postives = 172/233 (73.82%), Query Frame = 0 Query: 205 KVSMKEEEVEDEGMEDEELEVVEEFNPFLFIKQLPPYEHVA-IQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQ 436 +V + +E +E +D +E+ EFNPF F+K LP YE V + LP++ + + LVLDLDETLVHC+V+ V D D+ FP+D+NG Y V V+KRP++ EFL +VS+ FEVVVFTASQ+VYA+ LL+L+DP + IKHRL+RD CLPVEGNY+KDL+VLGRD+ + +LIDNSP+A+GYQ+DNGIPIESWF D D ELLKLLPFLE L VDDVRP++ FQ Sbjct: 110 EVEVADEAPVEEAADDATVEL--EFNPFYFMKTLPAYEDVMDFVRPVALPKKDASSPK-----VCLVLDLDETLVHCSVDDVADADLKFPIDYNGTEYTVSVKKRPYMTEFLAQVSEWFEVVVFTASQRVYAETLLNLLDPYGQYIKHRLYRDNCLPVEGNYLKDLNVLGRDLRQVLLIDNSPHAFGYQVDNGIPIESWFYDEADDELLKLLPFLESLVHVDDVRPIVARQFQ 335
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|695392775|ref|XP_009520430.1| (hypothetical protein PHYSODRAFT_311755 [Phytophthora sojae] >gi|348685327|gb|EGZ25142.1| hypothetical protein PHYSODRAFT_311755 [Phytophthora sojae]) HSP 1 Score: 266.159 bits (679), Expect = 1.673e-83 Identity = 133/250 (53.20%), Postives = 184/250 (73.60%), Query Frame = 0 Query: 197 SAASEDG-EKVSMKEEEVE-------DEGMEDEELEVVEEFNPFLFIKQLPPYEHVAIQGK--ICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQ 436 SA +ED E+V+ ++++ DE E++ + +EFNPF F+K LP YE + ++GK I LP++ S + LVLDLDETLVHC+V+ V +P + FPV FNGV Y V+V+KRPHLE FL RVSK+FE+VVFTAS +VYA+ L++++DP + IK+RL+R+ CL V GNY+KDL+VLGRD+++ VL+DNSP+A+GYQ++NGIPIE+W++D D ELL LLPFLE L VDDVRP++ FQ Sbjct: 2 SAQAEDSTEEVATADDDMHVADSPDADEQEEEDATPLEQEFNPFYFMKTLPKYEDI-VEGKRPISLPEK-----SRNAPKICLVLDLDETLVHCSVDEVKNPHMQFPVTFNGVEYTVNVKKRPHLEYFLKRVSKLFEIVVFTASHKVYAEKLMNMLDPNRNFIKYRLYREDCLDVFGNYLKDLNVLGRDLSKVVLVDNSPHAFGYQVNNGIPIETWYDDEADAELLNLLPFLESLVDVDDVRPIVEKQFQ 245
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|301115156|ref|XP_002905307.1| (nuclear LIM factor interactor-interacting protein hyphal form, putative [Phytophthora infestans T30-4] >gi|262110096|gb|EEY68148.1| nuclear LIM factor interactor-interacting protein hyphal form, putative [Phytophthora infestans T30-4]) HSP 1 Score: 271.552 bits (693), Expect = 2.877e-83 Identity = 127/212 (59.91%), Postives = 166/212 (78.30%), Query Frame = 0 Query: 227 EEFNPFLFIKQLPPYEHVAIQGK--ICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQ 436 +EFNPF F+K LP YE + ++GK I LP+R SH + LVLDLDETLVHC+V+ V +P + FPV FNGV Y V+V+KRPH+E FL RVSK+FE+VVFTAS +VYA+ L +++DP + LIK+RL+RD CL V GNY+KDL+VLGRD+++ VL+DNSP+A+GYQ++NGIPIE+W++D D ELL LLPFLE L VDDVRP++ FQ Sbjct: 204 QEFNPFYFMKTLPKYEDI-VEGKRPISLPER-----SHNAPKICLVLDLDETLVHCSVDEVKNPHMQFPVTFNGVEYIVNVKKRPHMEYFLKRVSKLFEIVVFTASHKVYAEKLTNMLDPHRNLIKYRLYRDDCLDVFGNYLKDLNVLGRDLSKVVLVDNSPHAFGYQVNNGIPIETWYDDAADAELLNLLPFLESLVDVDDVRPIVEKQFQ 409
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|290990355|ref|XP_002677802.1| (nuclear lim interactor-interacting protein [Naegleria gruberi] >gi|284091411|gb|EFC45058.1| nuclear lim interactor-interacting protein [Naegleria gruberi]) HSP 1 Score: 266.929 bits (681), Expect = 1.200e-82 Identity = 135/244 (55.33%), Postives = 178/244 (72.95%), Query Frame = 0 Query: 204 EKVSMKEEEVEDE-------GMEDEELEVVEEFNPFLFIKQLPPYEHVAIQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQSHLR 440 EKV KEE+ E++ + D E E +EFNPF FI LPP ++ + CLP ++ ++ +TLVLDLDETLVHC+ EP+PDPD F V F+GV Y V+VRKRP+ EFL VSK+FEVVVFTASQ VYAD LL ++DP ++ IK+R+FR++C+ VE NY+KDL VLGRD+++T ++DNSP AYGYQIDNGIPI SWF+D++D EL+KL+PFL++L + DVR +IR F HLR Sbjct: 88 EKVMQKEEDYEEDIYDFSYSQLLDIEYEDDDEFNPFDFIAHLPPKPKIS-PHQYCLPPKELSQPD-----ITLVLDLDETLVHCSTEPIPDPDFTFTVLFHGVEYTVYVRKRPYFVEFLEAVSKIFEVVVFTASQSVYADKLLSILDPERKYIKYRVFRNSCIDVERNYLKDLEVLGRDLSKTCIVDNSPQAYGYQIDNGIPILSWFDDKEDRELMKLIPFLKQLYKHSDVRTIIRKKF--HLR 323
BLAST of EWM25794.1 vs. NCBI_GenBank
Match: gi|566032229|gb|ETI55140.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|567969908|gb|ETK94972.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567998282|gb|ETL48357.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|570959973|gb|ETP24952.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 266.544 bits (680), Expect = 3.789e-82 Identity = 125/212 (58.96%), Postives = 166/212 (78.30%), Query Frame = 0 Query: 227 EEFNPFLFIKQLPPYEHVAIQGK--ICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRPLIRTAFQ 436 +EFNPF F+K LP YE + ++GK I LP+R S + LVLDLDETLVHC+V+ V +P + FPV FNGV Y V+V+KRPH+E FL RVSK+FE+VVFTAS +VYA+ L++++DP + LIK+RL+RD CL V GNY+KDL+VLGRD+++ +L+DNSP+A+GYQ++NGIPIE+W++D D ELL LLPFLE L VDDVRP++ FQ Sbjct: 140 QEFNPFYFMKTLPKYEDI-VEGKRPISLPER-----SRNAPKICLVLDLDETLVHCSVDEVKNPHMQFPVTFNGVEYIVNVKKRPHMEYFLKRVSKLFEIVVFTASHKVYAEKLMNMLDPHRNLIKYRLYRDDCLDVFGNYLKDLNVLGRDLSKVLLVDNSPHAFGYQVNNGIPIETWYDDEADAELLNLLPFLESLVDVDDVRPIVEKQFQ 345 The following BLAST results are available for this feature:
BLAST of EWM25794.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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