EWM25810.1, cds4850 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|553196407|ref|XP_005856335.1| (hypothetical protein NGA_2014700 [Nannochloropsis gaditana CCMP526] >gi|422292715|gb|EKU20017.1| hypothetical protein NGA_2014700 [Nannochloropsis gaditana CCMP526] >gi|585107677|gb|EWM25810.1| hypothetical protein Naga_100021g35 [Nannochloropsis gaditana]) HSP 1 Score: 470.315 bits (1209), Expect = 1.446e-167 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 Query: 1 MPLRRSRAFVGNTLLVHPRGQAWTSVPVNAAFETPRSLYARPVLSVGKMKLAADMQSFRDGFRTLFFPGVGILSLGLPFLLVGVLVGKPSSGEAKDTNLKTKRSSLLIASNPLFQEYRFSKALVIKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFFWHEEGAQSPSKEGRARPATPADVIDAKVTSIRDKNLN 236 MPLRRSRAFVGNTLLVHPRGQAWTSVPVNAAFETPRSLYARPVLSVGKMKLAADMQSFRDGFRTLFFPGVGILSLGLPFLLVGVLVGKPSSGEAKDTNLKTKRSSLLIASNPLFQEYRFSKALVIKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFFWHEEGAQSPSKEGRARPATPADVIDAKVTSIRDKNLN Sbjct: 1 MPLRRSRAFVGNTLLVHPRGQAWTSVPVNAAFETPRSLYARPVLSVGKMKLAADMQSFRDGFRTLFFPGVGILSLGLPFLLVGVLVGKPSSGEAKDTNLKTKRSSLLIASNPLFQEYRFSKALVIKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFFWHEEGAQSPSKEGRARPATPADVIDAKVTSIRDKNLN 236
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|545373493|ref|XP_005651106.1| (hypothetical protein COCSUDRAFT_52381 [Coccomyxa subellipsoidea C-169] >gi|384253087|gb|EIE26562.1| hypothetical protein COCSUDRAFT_52381 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 80.8777 bits (198), Expect = 3.873e-16 Identity = 37/88 (42.05%), Postives = 59/88 (67.05%), Query Frame = 0 Query: 126 KLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFFWHEEGAQSPSKEGR 213 KL+ S+ +D +G S +VPG G +SD WAPV A +V LY N +L ++ +EE+LP TDI+P+ATI +L+++ + AQ +++ R Sbjct: 15 KLIVSLAIDFVGMSSYIVPGAGNISDIGWAPVQAFIVHHLYNNRLLTTLSFIEEVLPFTDIVPSATIGWLMEYTRAGKRAQDEAEQVR 102
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|551544509|ref|XP_005760304.1| (hypothetical protein EMIHUDRAFT_317180 [Emiliania huxleyi CCMP1516] >gi|551565740|ref|XP_005769300.1| hypothetical protein EMIHUDRAFT_356053, partial [Emiliania huxleyi CCMP1516] >gi|485608710|gb|EOD07875.1| hypothetical protein EMIHUDRAFT_317180 [Emiliania huxleyi CCMP1516] >gi|485620209|gb|EOD16871.1| hypothetical protein EMIHUDRAFT_356053, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.0333 bits (201), Expect = 1.218e-15 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 0 Query: 124 VIKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFFWHEEG------------AQSPSKEGRARPATPADVID 224 +IKL+ SI++DL+G S VP GE +D WAPVSA +V LYGN++L + EE+LP D++PTATI +LL+ E G A +PS G++R ADVID Sbjct: 80 LIKLLVSILIDLVGVASYAVPLAGEGADLAWAPVSALLVNYLYGNSILTGLAFAEEVLPGLDVVPTATIGWLLEN--TELGRSVNEASAPPPKADAPSSAGKSR-GDDADVID 189
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|298709827|emb|CBJ31625.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.4925 bits (197), Expect = 2.415e-15 Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 0 Query: 126 KLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLL 196 KL S+++DLIG S +PG+GE +D WAP+S+A++ LYGN++ A + +EE+LP D+IPTATIA+ L Sbjct: 30 KLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFL 100
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|499483862|ref|WP_011170502.1| (hypothetical protein [Methanococcus maripaludis] >gi|44920878|emb|CAF30114.1| hypothetical protein MMP0558 [Methanococcus maripaludis S2]) HSP 1 Score: 77.411 bits (189), Expect = 7.473e-15 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 0 Query: 126 KLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFF 199 KL+ SI LD++G + L+PGLGE DF+WAP+ A ++R LY +++L EELL TDIIP+ATI ++L+ F Sbjct: 12 KLIISIALDIVGMATYLIPGLGESGDFVWAPIYALIIRNLYHSSILGFFGGFEELLMGTDIIPSATILWVLETF 85
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|503765008|ref|WP_013999084.1| (hypothetical protein [Methanococcus maripaludis] >gi|339904175|gb|AEK19617.1| hypothetical protein GYY_03690 [Methanococcus maripaludis X1]) HSP 1 Score: 77.411 bits (189), Expect = 7.632e-15 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 0 Query: 126 KLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFF 199 KL+ SI LD++G + L+PGLGE DF+WAP+ A ++R LY +++L EELL TDIIP+ATI ++L+ F Sbjct: 12 KLIISIALDIVGMATYLIPGLGESGDFVWAPIYALIIRNLYHSSILGFFGGFEELLIGTDIIPSATILWVLETF 85
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|470430917|ref|XP_004338347.1| (hypothetical protein ACA1_203890 [Acanthamoeba castellanii str. Neff] >gi|440795198|gb|ELR16334.1| hypothetical protein ACA1_203890 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 80.4925 bits (197), Expect = 9.225e-15 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 0 Query: 108 IASNPL--FQEYRFSKALVIKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLD 197 + +NP F R + + KL AS+++D IG + VP LGE D +WAP+S ++ LLYGN LA +EEL+P D IPTAT+A++ D Sbjct: 116 VGNNPWGPFANIRLTPTTIAKLFASLLIDAIGFATYAVPVLGEAGDAVWAPISGFLIFLLYGNIWLAGAGFVEELMPGLDFIPTATLAWVAD 207
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|676391613|ref|XP_009039084.1| (hypothetical protein AURANDRAFT_29551 [Aureococcus anophagefferens] >gi|323450246|gb|EGB06128.1| hypothetical protein AURANDRAFT_29551 [Aureococcus anophagefferens]) HSP 1 Score: 77.0258 bits (188), Expect = 1.326e-14 Identity = 35/75 (46.67%), Postives = 54/75 (72.00%), Query Frame = 0 Query: 126 KLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDFFW 200 KL+ ++LDL+GD S L+P LGE +D +APV A+V++ L+ +N +AA +EE+LP TD+IPT T+++ L W Sbjct: 15 KLVGCVVLDLLGDTSELIPFLGEFTDIAYAPVEASVLKALFQSNTIAAFGFVEEILPFTDVIPTFTLSWCLATLW 89
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|929768194|ref|XP_014159030.1| (hypothetical protein SARC_02683 [Sphaeroforma arctica JP610] >gi|906956611|gb|KNC85128.1| hypothetical protein SARC_02683 [Sphaeroforma arctica JP610]) HSP 1 Score: 77.411 bits (189), Expect = 1.938e-14 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 125 IKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFL 195 +KL S+++DLIG + LVPG GE+ D WAPV A +V +YG L A++ EE+LP TD IPTATI ++ Sbjct: 41 VKLFWSVLIDLIGALTYLVPGFGELIDVFWAPVQAYLVSTMYGFGPLTALSFFEEILPGTDFIPTATIGWV 111
BLAST of EWM25810.1 vs. NCBI_GenBank
Match: gi|551672956|ref|XP_005839234.1| (hypothetical protein GUITHDRAFT_150734 [Guillardia theta CCMP2712] >gi|428183396|gb|EKX52254.1| hypothetical protein GUITHDRAFT_150734 [Guillardia theta CCMP2712]) HSP 1 Score: 76.6406 bits (187), Expect = 2.054e-14 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 118 RFSKALVIKLMASIILDLIGDGSLLVPGLGEVSDFLWAPVSAAVVRLLYGNNVLAAVNLLEELLPSTDIIPTATIAFLLDF 198 R S+ KLM SI++D+IG S L+P + E D WAP+S+ +V +YGN +L+ + +EE+LP TDI PTAT +L F Sbjct: 3 RMSEEKWSKLMLSIVIDIIGILSYLIPVIAEFFDVFWAPLSSLLVFQMYGNRMLSGIAFIEEILPFTDIFPTATFGWLCQF 83 The following BLAST results are available for this feature:
BLAST of EWM25810.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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