EWM25847.1, cds4847 (CDS) Nannochloropsis gaditana

Overview
NameEWM25847.1
Unique Namecds4847
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:521625..523433 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25847.1
Producte3 ubiquitin-protein ligase upl6
Orig transcript idgnl|cribi|Naga_100021g32.8790.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:521625..523433 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT
Homology
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|553196402|ref|XP_005856334.1| (ubiquitin-protein ligase E3 C, partial [Nannochloropsis gaditana CCMP526] >gi|422292714|gb|EKU20016.1| ubiquitin-protein ligase E3 C, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1253.04 bits (3241), Expect = 0.000e+0
Identity = 602/602 (100.00%), Postives = 602/602 (100.00%), Query Frame = 0
Query:    1 MQRRLAFNNSVKRQVLNTVAYSGPTSKFLWVHLLTRYGSSLVKIKGIQWLAPGEGSMHGNAFISALVIMAAILQHEFTLLSNEDFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIHNDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
            MQRRLAFNNSVKRQVLNTVAYSGPTSKFLWVHLLTRYGSSLVKIKGIQWLAPGEGSMHGNAFISALVIMAAILQHEFTLLSNEDFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIHNDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT
Sbjct:  215 MQRRLAFNNSVKRQVLNTVAYSGPTSKFLWVHLLTRYGSSLVKIKGIQWLAPGEGSMHGNAFISALVIMAAILQHEFTLLSNEDFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIHNDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 816          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|585107714|gb|EWM25847.1| (e3 ubiquitin-protein ligase upl6 [Nannochloropsis gaditana])

HSP 1 Score: 1250.34 bits (3234), Expect = 0.000e+0
Identity = 602/602 (100.00%), Postives = 602/602 (100.00%), Query Frame = 0
Query:    1 MQRRLAFNNSVKRQVLNTVAYSGPTSKFLWVHLLTRYGSSLVKIKGIQWLAPGEGSMHGNAFISALVIMAAILQHEFTLLSNEDFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIHNDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
            MQRRLAFNNSVKRQVLNTVAYSGPTSKFLWVHLLTRYGSSLVKIKGIQWLAPGEGSMHGNAFISALVIMAAILQHEFTLLSNEDFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIHNDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT
Sbjct:    1 MQRRLAFNNSVKRQVLNTVAYSGPTSKFLWVHLLTRYGSSLVKIKGIQWLAPGEGSMHGNAFISALVIMAAILQHEFTLLSNEDFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIHNDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|298708318|emb|CBJ48381.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 348.591 bits (893), Expect = 6.360e-111
Identity = 173/412 (41.99%), Postives = 265/412 (64.32%), Query Frame = 0
Query:  195 SPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIV-VKIRRASLLDDGLSMLNS--LPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIH-NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
            S R++ LLH +P+ +  ++R+ +F   +++DK   Q  + P V +++RR  +L+DGL+ L S    E   KRR++V+Y   AG +ESGID+GGL KD+ TD   L FD  +GLFR  + G +YPNP + ++H +++  LF+F G+I+GKA+YE + V P F    LG +RG Y+++ +  DL  +  ELY+NL++L++  D   +++L L F VA ++ G   E +LI GG++  V+ ANRLEY+  V KHH+VD +  Q++AF RG  ++I+P WL++F+E ELQ+L+SGS     DVEDL+RH+RY  G+ G D+ V+  W V+  +  +++   L FVTS +R P  GF ++ P F + R  +    E RLP A TCFN L  P Y+S+   + KLL +I SG GFEL+
Sbjct:   34 STRSRRLLHAMPYCMSLTQRMRVFEHLVKADKQRHQPENTPGVPIRVRRGHVLEDGLAALGSGGRAEGQTKRRLIVMYTGAAGHEESGIDMGGLFKDFWTDLSALAFDINYGLFRVTKEGLMYPNPSSGMVHGSEHLRLFQFLGRILGKALYEGITVQPEFATFFLGFIRGDYNFLHLFHDLHGLDPELYRNLMFLKTY-DGGDVEDLCLTFTVADEEFGANKEVDLIPGGSRRAVTSANRLEYVNRVAKHHLVDGVKPQAEAFVRGLWEVINPQWLQMFSEPELQVLISGS-NKTVDVEDLKRHTRYSGGFVGMDRTVKRFWSVVSAMSAKEKAALLRFVTSCERPPPLGFESMQPPFCVHRVGIRSDGE-RLPTASTCFNTLKLPTYSSEKVLREKLLTSIFSGTGFELS 442          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|675200135|ref|XP_008908952.1| (hypothetical protein PPTG_13246 [Phytophthora parasitica INRA-310] >gi|568091062|gb|ETN05888.1| hypothetical protein PPTG_13246 [Phytophthora parasitica INRA-310])

HSP 1 Score: 350.517 bits (898), Expect = 7.001e-110
Identity = 196/550 (35.64%), Postives = 310/550 (56.36%), Query Frame = 0
Query:   59 GNAFISALVIMAAILQHEFTLLSNED-FRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIV-VKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIH----NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
             + ++  LV+   + +H   ++ +E+ + +  PL    I  +V +LK   +E    +                     ++++P+   V++  FV+    R +  LYNR SR+ FC +S W++++ +   L  +    +PRA  L+  +P+ +PFS+R+ LF+  +++DK+  QN S  +  ++I R ++L+DGL  LNS+    LK+RI VV+V+ AG +E GID GGL K++  D   L FD  +GLF T     LYPNP +   H    +D+ T+F+F G+I+GKA+YE +VV P F    L  +   ++    L +L  +  E+YKNL++L+S E D  +++LGL   V  +  G Q E E+I GG  +PV+  N+  YI LV  +++  +I EQ  AF  G   +I P WL++FNE ELQ+L+SG   G+ D++DL+ +SRY  GY   DK V  LW  L      ++  FL F TS  RAP  GF +L P F + +  + +  ++ LP + TCFN L  P Y+S    + KLL +ISSGAGFE++
Sbjct:   56 SDPYMCMLVLFCMLYEHLLVVMDDEEMYEQEYPLPLCQIERIVVSLKHALHEAYWNY---------------------ANLAPSSESVAFGMFVVEMATRLMRVLYNRCSRQPFCNVSSWIIAELDSNQLIEEVLLGTPRANKLIQSMPYLVPFSDRVKLFQRLVKADKEIHQNESCSVYRIRIHRGAILEDGLRKLNSIRTN-LKKRINVVFVNSAGREEVGIDAGGLFKEFWLDLSTLAFDLQYGLFLTTHDQLLYPNPNSASSHFSRESDHLTMFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFN---QLNELPSLDPEIYKNLMFLKSYEGD--VEDLGLTHTVVQEVFGEQKEVEIIPGGGNVPVTNRNKTRYIHLVANYYLNTQIREQCTAFRMGLSDLIDPRWLQMFNEPELQVLISGK-SGKIDIDDLKANSRYAGGYYALDKRVAWLWQALASFTPSEQAAFLRFTTSCQRAPSLGFASLTPQFCVQKIPI-RSDDELLPSSSTCFNTLKLPTYSSYKVLRAKLLMSISSGAGFEMS 576          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|1210520043|dbj|GAX20926.1| (ubiquitin-protein ligase E3 C [Fistulifera solaris])

HSP 1 Score: 356.681 bits (914), Expect = 4.903e-108
Identity = 208/535 (38.88%), Postives = 306/535 (57.20%), Query Frame = 0
Query:   84 DFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKL---LLHLLPFTIPFSERLTLFREWIQSDKDTFQ--NRSAP---------IVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFR-TNRSG-FLYPNPIAPLIH-NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFEL 601
            D  K LPL Q  I   ++ LK   Y  C              ++ A++ST             +   ++T   R +  LY+R SR+  C   +W++SD   + +R   RH    + L   +L L PF + F  RL LF   I + +   Q  N   P         I V+I R  +L+DGL+ +N+L    +++RIVV Y +EAG +E+G+D GGL K++ TD C + FDP + LFR T+ +G  +YPNP +   H  D+ TLFEF G+I+GKA++E + + P F    L  +RG Y+Y+ ML DLS V  +LY NL++L++ + DA   +L L F V   D G   E  L+  G  + V+ AN+L YI LV K++VVDR+ EQS+AF RG  ++I  SWLR+FNE ELQ+L+SG+  G  DVED+R ++RY  G+ G D+ V   W+V+   + +++   L FVTS +R P  GF +++P FTI R  + +  + +LP A TCFN L  P Y+S+   +++LL AI SGAGFEL
Sbjct:  478 DMDKPLPLHQ--IRQCIQFLKKLLYRACCLDD----------LSIAQSSTY------------FGLALITASSRAMKDLYDRSSRRPLCTPKLWIVSDLMESEIRSCKRHEDFTSLLHLPVLRLCPFLVSFKRRLKLFECIITTSRIEIQGVNDGNPFNTNPLKQGIPVRITRGRILEDGLATMNNLGSN-MRQRIVVNYYNEAGVRETGVDAGGLFKEFWTDLCAIAFDPNYALFRVTDGAGDCMYPNPSSAAAHGTDHITLFEFLGRILGKALFEGITIHPRFAHFFLSFLRGDYNYLHMLPDLSTVDPQLYNNLMFLKTYDGDA--RDLCLSFTVTTDDFGGTKEIPLVPKGDTLEVTNANKLRYIGLVAKYYVVDRVKEQSEAFTRGLWEVIDRSWLRIFNEPELQVLISGASDGRLDVEDMRANTRYVGGFTGLDRTVTRFWNVVARFESKQQADLLRFVTSCERPPPLGFGSMNPPFTIQRVGILRD-DDKLPTASTCFNILKLPTYSSEKVLRDRLLLAIQSGAGFEL 984          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|970646800|gb|KUF86832.1| (E3 ubiquitin-protein ligase UPL6 [Phytophthora nicotianae])

HSP 1 Score: 352.829 bits (904), Expect = 1.200e-106
Identity = 197/550 (35.82%), Postives = 310/550 (56.36%), Query Frame = 0
Query:   59 GNAFISALVIMAAILQHEFTLLSNED-FRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIV-VKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIH----NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
             + ++  LV+   + +H   ++ +E+ + +  PL    I  +V +LK   +E    +                     ++++P+   V++  FV+    R +  LYNR SR+ FC +S W++++ +   L  +    +PRA  L+  +P+ +PFS+R+ LF+  +++DK+  QN S  +  ++I R ++L+DGL  LNS+    LK+RI VV+V+ AG +E GID GGL K++  D   L FD  +GLF T     LYPNP +   H    +D+ T+F+F G+I+GKA+YE +VV P F    L  +   ++    L +L  +  E+YKNL++L+S E D  +++LGL   V  +  G Q E E+I GG  +PV+  N+  YI LV  +++  +I EQ  AF  G   +I P WL++FNE ELQ+L+SG   G+ D++DL+ +SRY  GY   DK V  LW  L      ++  FL F TS  RAP  GF +L P F + +  + +  ++ LP + TCFN L  P Y+S    + KLL +ISSGAGFE+T
Sbjct:  446 SDPYMCMLVLFCMLYEHLLVVMDDEEMYEQEYPLPLCQIERIVVSLKHALHEAYWNY---------------------ANLAPSSESVAFGMFVVEMATRLMRVLYNRCSRQPFCNVSSWIIAELDSNQLIEEVLLGTPRANKLIQSMPYLVPFSDRVKLFQRLVKADKEIHQNESCSVYRIRIHRGAILEDGLRKLNSIRTN-LKKRINVVFVNSAGREEVGIDAGGLFKEFWLDLSTLAFDLQYGLFLTTHDQLLYPNPNSASSHFSRESDHLTMFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFN---QLNELPSLDPEIYKNLMFLKSYEGD--VEDLGLTHTVVQEVFGEQKEVEIIPGGGNVPVTNRNKTRYIHLVANYYLNTQIREQCTAFRMGLSDLIDPRWLQMFNEPELQVLISGK-SGKIDIDDLKANSRYAGGYYALDKRVAWLWQALASFTPSEQAAFLRFTTSCQRAPSLGFASLTPQFCVQKIPI-RSDDELLPSSSTCFNTLKLPTYSSYKVLRAKLLMSISSGAGFEMT 966          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|970628313|gb|KUF75957.1| (E3 ubiquitin-protein ligase UPL6 [Phytophthora nicotianae])

HSP 1 Score: 352.443 bits (903), Expect = 1.375e-106
Identity = 197/550 (35.82%), Postives = 310/550 (56.36%), Query Frame = 0
Query:   59 GNAFISALVIMAAILQHEFTLLSNED-FRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIV-VKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIH----NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
             + ++  LV+   + +H   ++ +E+ + +  PL    I  +V +LK   +E    +                     ++++P+   V++  FV+    R +  LYNR SR+ FC +S W++++ +   L  +    +PRA  L+  +P+ +PFS+R+ LF+  +++DK+  QN S  +  ++I R ++L+DGL  LNS+    LK+RI VV+V+ AG +E GID GGL K++  D   L FD  +GLF T     LYPNP +   H    +D+ T+F+F G+I+GKA+YE +VV P F    L  +   ++    L +L  +  E+YKNL++L+S E D  +++LGL   V  +  G Q E E+I GG  +PV+  N+  YI LV  +++  +I EQ  AF  G   +I P WL++FNE ELQ+L+SG   G+ D++DL+ +SRY  GY   DK V  LW  L      ++  FL F TS  RAP  GF +L P F + +  + +  ++ LP + TCFN L  P Y+S    + KLL +ISSGAGFE+T
Sbjct:  446 SDPYVCMLVLFCMLYEHLLVVMDDEEMYEQEYPLPLCQIERIVVSLKHALHEAYWNY---------------------ANLAPSSESVAFGMFVVEMATRLMRVLYNRCSRQPFCNVSSWIIAELDSNQLIEEVLLGTPRANKLIQSMPYLVPFSDRVKLFQRLVKADKEIHQNESCSVYRIRIHRGAILEDGLRKLNSIRTN-LKKRINVVFVNSAGREEVGIDAGGLFKEFWLDLSTLAFDLQYGLFLTTHDQLLYPNPNSASSHFSRESDHLTMFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFN---QLNELPSLDPEIYKNLMFLKSYEGD--VEDLGLTHTVVQEIFGEQKEVEIIPGGGNVPVTNRNKTRYIHLVANYYLNTQIREQCTAFRIGLSDLIDPRWLQMFNEPELQVLISGK-SGKIDIDDLKANSRYAGGYYALDKRVAWLWQALASFTPSEQAAFLRFTTSCQRAPSLGFASLTPQFCVQKIPI-RSDDELLPSSSTCFNTLKLPTYSSYKVLRAKLLMSISSGAGFEMT 966          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|953489436|emb|CEG46802.1| (hypothetical protein L916_12250 [Plasmopara halstedii])

HSP 1 Score: 354.755 bits (909), Expect = 3.340e-106
Identity = 197/550 (35.82%), Postives = 312/550 (56.73%), Query Frame = 0
Query:   59 GNAFISALVIMAAILQHEFTLLSNED-FRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIV-VKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIH----NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
             + ++  L++     +H   ++ +E+ + +  PL    I  +V +LK   YE    +                     + ++P+   V++  FV+    R +  LYNR SR+ FC ++ W++++ N + L  +    +PRA  L+  +P+ +PFSER+ LF+  ++SDK+  QN ++ +  ++I R+++L DGL  LN++    LK+RI VV+V+ AG +E GID GGL K++  D   L FD  +GLF T     LYPNP +   H    +D+ T+F+F G+I+GKA+YE +VV P F    L  +   +++   L +L  +  E+Y+NL++L+S E D  +++LGL   +  +  G Q E E+I GG  IPV+  N+  YI LV  +++  +I EQ  AF  G   +I P WL++FNE ELQ+L+SG   G+ DV+DL+ ++RY  GY   DK V  LW  L      ++  FL F TS  RAP  GF +L P F + + S+ Q  ++ LP + TCFN L  P Y+S    + KLL +IS+GAGFE+T
Sbjct:  611 SDPYVCMLLLFCMSYEHLLVVMDDEEMYEQEYPLPLCQIERIVLSLKHALYEAYWTY---------------------AHLAPSTESVAFGMFVVEMGTRLMRVLYNRCSRQPFCNVTSWIIAELNSSQLIEEVLFGTPRANKLIQSMPYLVPFSERVKLFQRLVKSDKEIHQNENSSVYRIRIHRSAILQDGLRKLNTIRAN-LKKRINVVFVNAAGREEMGIDAGGLFKEFWLDLSTLAFDLQYGLFLTTHDELLYPNPSSASGHFSRESDHLTMFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFNH---LNELPSLDPEIYRNLMFLKSYEGD--VEDLGLTHTIVQEVFGEQKEIEIIPGGGNIPVTNRNKTRYIHLVANYYLNTQIREQCAAFRMGLSDLIDPRWLQMFNEPELQVLISGK-SGKIDVDDLQANTRYTGGYYAMDKRVAWLWQALASFTPSEQAAFLRFTTSCQRAPSLGFASLTPQFCVQKVSV-QNDDELLPSSSTCFNTLKLPTYSSYKVLRAKLLTSISAGAGFEMT 1131          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|1210526898|dbj|GAX14225.1| (ubiquitin-protein ligase E3 C [Fistulifera solaris])

HSP 1 Score: 356.681 bits (914), Expect = 8.484e-106
Identity = 207/535 (38.69%), Postives = 307/535 (57.38%), Query Frame = 0
Query:   84 DFRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKL---LLHLLPFTIPFSERLTLF-------REWIQSDKDTFQNRSAP----IVVKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFR-TNRSG-FLYPNPIAPLIH-NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFEL 601
            D  K LP+ Q  I   ++ LK   Y  C              ++ A+ ST             +   ++T   + +  LY+R SR+  C   +W++SD   + +R   RH    + L   +L + PF + F  RL LF       R  IQ   D     + P    I V+I R  +L+DGL+ +N+L    +++RIVV Y +EAG +E+G+D GGL K++ TD C + FDP + LFR T+ +G  +YPNP +   H +D+ TLFEF G+I+GKA++E + + P F    L  +RG Y+Y+ ML DLS V  +LY NL++L++ + DA   +L L F V   D G   E  L+  G  + V+ AN+L YI LV K++VVDR+ EQS+AF RG  ++I  SWLR+FNE ELQ+L+SG+  G+ DVED++ ++RY  G+ G D+ V   W+V+   D +++   L FVTS +R P  GF +++P FTI R  + +  +K LP A TCFN L  P Y+S+   +++LL AI SGAGFEL
Sbjct:  800 DMDKPLPIHQ--IRRCIQLLKKLLYRACCLDD----------LSVAQNSTF------------FGLALITASSKAMKDLYDRSSRRPLCTPKLWIVSDLMESEIRSCKRHGDFSSLLNLPVLRICPFLVSFKRRLKLFECIITTSRIEIQGVNDVNPFNTNPLKKGIPVRITRGRILEDGLATMNNLGSN-MRQRIVVNYYNEAGVRETGVDAGGLFKEFWTDLCAIAFDPNYALFRVTDGAGDCMYPNPSSAAAHGSDHITLFEFLGRILGKALFEGITIHPRFAHFFLSFLRGDYNYLHMLPDLSTVDPQLYNNLMFLKTYDGDA--RDLCLSFTVTTDDFGGTKEIPLVPKGDSLEVTNANKLRYIGLVAKYYVVDRVKEQSEAFTRGLWEVIDRSWLRIFNEPELQVLISGASDGKLDVEDMKANTRYVGGFTGLDRTVARFWNVVARFDSKQQADLLRFVTSCERPPPLGFGSMNPPFTIQRVGILRDGDK-LPTASTCFNILKLPTYSSEKVLRDRLLLAIQSGAGFEL 1306          
BLAST of EWM25847.1 vs. NCBI_GenBank
Match: gi|568044961|gb|ETM42128.1| (hypothetical protein L914_12169 [Phytophthora parasitica])

HSP 1 Score: 353.599 bits (906), Expect = 1.013e-105
Identity = 197/550 (35.82%), Postives = 310/550 (56.36%), Query Frame = 0
Query:   59 GNAFISALVIMAAILQHEFTLLSNED-FRKGLPLAQAHIVHLVKTLKVFCYEGCLAHTDEKVLMPTTTMTTAETSTSDSSVSPAVLDVSYTRFVLTTLCRFLATLYNRWSRKAFCALSVWVLSDANFTFLRHDSRHWSPRAKLLLHLLPFTIPFSERLTLFREWIQSDKDTFQNRSAPIV-VKIRRASLLDDGLSMLNSLPEEFLKRRIVVVYVSEAGTQESGIDLGGLLKDYITDACRLLFDPAFGLFRTNRSGFLYPNPIAPLIH----NDYATLFEFAGKIVGKAMYESVVVAPLFLPMVLGHMRGHYDYMQMLQDLSDVSEELYKNLLYLQSCEDDAVLDELGLCFAVAHQDLGRQHEEELIEGGAQIPVSKANRLEYIQLVTKHHVVDRIAEQSKAFCRGFHQIISPSWLRVFNECELQLLVSGSIGGEWDVEDLRRHSRYGQGYRGADKAVRILWDVLEELDYEKRRQFLHFVTSSDRAPLGGFTNLDPVFTITRASLAQGCEKRLPMARTCFNELIWPCYTSKLAAKNKLLQAISSGAGFELT 602
             + ++  LV+   + +H   ++ +E+ + +  PL    I  +V +LK   +E    +                     ++++P+   V++  FV+    R +  LYNR SR+ FC +S W++++ +   L  +    +PRA  L+  +P+ +PFS+R+ LF+  +++DK+  QN S  +  ++I R ++L+DGL  LNS+    LK+RI VV+V+ AG +E GID GGL K++  D   L FD  +GLF T     LYPNP +   H    +D+ T+F+F G+I+GKA+YE +VV P F    L  +   ++    L +L  +  E+YKNL++L+S E D  +++LGL   V  +  G Q E E+I GG  +PV+  N+  YI LV  +++  +I EQ  AF  G   +I P WL++FNE ELQ+L+SG   G+ D++DL+ +SRY  GY   DK V  LW  L      ++  FL F TS  RAP  GF +L P F + +  + +  ++ LP + TCFN L  P Y+S    + KLL +ISSGAGFE+T
Sbjct:  612 SDPYVCMLVLFCMLYEHLLVVMDDEEMYEQKYPLPLCQIERIVVSLKHALHEAYWNY---------------------ANLAPSSESVAFGMFVVEMATRLMRVLYNRCSRQPFCNVSSWIIAELDSNQLIEEVLLGTPRANKLIQSMPYLVPFSDRVKLFQRLVKADKEIHQNESCSVYRIRIHRGAILEDGLRKLNSIRTN-LKKRINVVFVNSAGREEVGIDAGGLFKEFWLDLSTLAFDLQYGLFLTTHDQLLYPNPNSASSHFSRESDHLTMFQFVGRILGKALYEGIVVQPKFAHFFLSKLLHSFN---QLNELPSLDPEIYKNLMFLKSYEGD--VEDLGLTHTVVQEIFGEQKEVEIIPGGGNVPVTNRNKTRYIHLVANYYLNTQIREQCTAFRMGLSDLIDPRWLQMFNEPELQVLISGK-SGKIDIDDLKANSRYAGGYYALDKRVAWLWQALASFTPSEQAAFLRFTTSCQRAPSLGFASLTPQFCVQKIPI-RSDDELLPSSSTCFNTLKLPTYSSYKVLRAKLLMSISSGAGFEMT 1132          
The following BLAST results are available for this feature:
BLAST of EWM25847.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196402|ref|XP_005856334.1|0.000e+0100.00ubiquitin-protein ligase E3 C, partial [Nannochlor... [more]
gi|585107714|gb|EWM25847.1|0.000e+0100.00e3 ubiquitin-protein ligase upl6 [Nannochloropsis ... [more]
gi|298708318|emb|CBJ48381.1|6.360e-11141.99conserved unknown protein [Ectocarpus siliculosus][more]
gi|675200135|ref|XP_008908952.1|7.001e-11035.64hypothetical protein PPTG_13246 [Phytophthora para... [more]
gi|1210520043|dbj|GAX20926.1|4.903e-10838.88ubiquitin-protein ligase E3 C [Fistulifera solaris... [more]
gi|970646800|gb|KUF86832.1|1.200e-10635.82E3 ubiquitin-protein ligase UPL6 [Phytophthora nic... [more]
gi|970628313|gb|KUF75957.1|1.375e-10635.82E3 ubiquitin-protein ligase UPL6 [Phytophthora nic... [more]
gi|953489436|emb|CEG46802.1|3.340e-10635.82hypothetical protein L916_12250 [Plasmopara halste... [more]
gi|1210526898|dbj|GAX14225.1|8.484e-10638.69ubiquitin-protein ligase E3 C [Fistulifera solaris... [more]
gi|568044961|gb|ETM42128.1|1.013e-10535.82hypothetical protein L914_12169 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4859rna4859Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications