EWM25803.1, cds4832 (CDS) Nannochloropsis gaditana

Overview
NameEWM25803.1
Unique Namecds4832
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:486346..487304 -
Alignment locationCM002464.1:486056..486240 -
Alignment locationCM002464.1:484712..485859 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25803.1
Productglycoside hydrolase family 8
Orig transcript idgnl|cribi|Naga_100021g14.8746.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:486346..487304 -
CM002464.1supercontigCM002464.1:486056..486240 -
CM002464.1supercontigCM002464.1:484712..485859 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089286-hairpin_glycosidase-like
IPR0123416hp_glycosidase
IPR002037Glyco_hydro_8
Homology
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|553195266|ref|XP_005856116.1| (glycoside hydrolase family 8 [Nannochloropsis gaditana CCMP526] >gi|422292951|gb|EKU20252.1| glycoside hydrolase family 8 [Nannochloropsis gaditana CCMP526] >gi|585107670|gb|EWM25803.1| glycoside hydrolase family 8 [Nannochloropsis gaditana])

HSP 1 Score: 1570.83 bits (4066), Expect = 0.000e+0
Identity = 763/763 (100.00%), Postives = 763/763 (100.00%), Query Frame = 0
Query:    1 MFWRSSSSQQPQGSPPPPSQHVGDDGYDQYVWEEDEETRSIVNAVRFNESPEMESIGSEDGIGEDHEGLDDEEGRESHRRPSGSPFSFLFNRFGHEEGSQQLLSGSRRSLQKIHPKNSRNSMKAESSGGSLASMGASPRPSSRGSPTVPRPASRSSTLRARSPQAKSLLRADAIGQKSQQRLEHLQVPSSEGFAPVQRSGSVPGRLGDTSSKPSHAAIAAAHQADRMRGRAWEGSGTRVDEMTGAWQAVSMGGTKRLMRGDGSQVMIGIGSGESRSHLPSLNDVGHFKEDLEGGEEEDEEGSAVNALVTFGYYLVMPALSLFHCSHRILRSYPVRVLSSVILLAGLALCVILAAVHLPIRLNKQKNVRGEPLTFSPPEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMSQGRYDYEKEAVALLLGMGDPRRGMFTKHGEVTLNPVRPVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRSLY 763
            MFWRSSSSQQPQGSPPPPSQHVGDDGYDQYVWEEDEETRSIVNAVRFNESPEMESIGSEDGIGEDHEGLDDEEGRESHRRPSGSPFSFLFNRFGHEEGSQQLLSGSRRSLQKIHPKNSRNSMKAESSGGSLASMGASPRPSSRGSPTVPRPASRSSTLRARSPQAKSLLRADAIGQKSQQRLEHLQVPSSEGFAPVQRSGSVPGRLGDTSSKPSHAAIAAAHQADRMRGRAWEGSGTRVDEMTGAWQAVSMGGTKRLMRGDGSQVMIGIGSGESRSHLPSLNDVGHFKEDLEGGEEEDEEGSAVNALVTFGYYLVMPALSLFHCSHRILRSYPVRVLSSVILLAGLALCVILAAVHLPIRLNKQKNVRGEPLTFSPPEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMSQGRYDYEKEAVALLLGMGDPRRGMFTKHGEVTLNPVRPVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRSLY
Sbjct:    1 MFWRSSSSQQPQGSPPPPSQHVGDDGYDQYVWEEDEETRSIVNAVRFNESPEMESIGSEDGIGEDHEGLDDEEGRESHRRPSGSPFSFLFNRFGHEEGSQQLLSGSRRSLQKIHPKNSRNSMKAESSGGSLASMGASPRPSSRGSPTVPRPASRSSTLRARSPQAKSLLRADAIGQKSQQRLEHLQVPSSEGFAPVQRSGSVPGRLGDTSSKPSHAAIAAAHQADRMRGRAWEGSGTRVDEMTGAWQAVSMGGTKRLMRGDGSQVMIGIGSGESRSHLPSLNDVGHFKEDLEGGEEEDEEGSAVNALVTFGYYLVMPALSLFHCSHRILRSYPVRVLSSVILLAGLALCVILAAVHLPIRLNKQKNVRGEPLTFSPPEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMSQGRYDYEKEAVALLLGMGDPRRGMFTKHGEVTLNPVRPVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRSLY 763          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|585110978|gb|EWM28560.1| (glycoside hydrolase family 8 [Nannochloropsis gaditana])

HSP 1 Score: 340.887 bits (873), Expect = 1.752e-102
Identity = 187/443 (42.21%), Postives = 260/443 (58.69%), Query Frame = 0
Query:  330 RSYPVRVLSSVILLAGLALCVILAAVHLPIRLNKQKNVRGEPLTFSPPEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDG---TPAPDAEEWIATALIFANNRWMSQGRYDYEKEAVALLLGMGDPRRGMFTKHGEVTLNPVR--PVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKD--LAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKS--HSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRSLY 763
            R Y  R  +  +++  LAL V++  + +  R    + +  E L    P G      GAA  G+YRNLF E++ K+ AE + K+Q+ +  LF GD  TEA+YV V        +  ++NTES  VTSE +SYGM+  V  D +E F+ LW+WA  +M+H  G +  FFAW+ +  G  +D     PAPDAE +IA ALI A+ +W S   Y Y+ EA+ LL  MG  +RG F++ G+ T NP       +NPSYHLPHFYE +ARF+ + G+ + + F+  AA +SR   H A ++ TGL  DYT  +G    D  L GH+NFQWDAWR  ANVAVDW+WW  D WQ + AD + AF   QG  +Y S Y  +G     +  H  GLVA+NAV  LAA D+ +  +FV ELW+  IP  + RYY  ML  +SLL  SG++++ +
Sbjct:  310 RKYTRRQAAVCLIMTTLALIVMIVVLSMAAR----RTIEVEGLL---PGGD----QGAAVTGVYRNLFTELMAKTPAESDVKVQEAYAHLFHGDPETEALYVEVEP-----NMAQIINTESDMVTSEGISYGMITCVHMDEQEPFNRLWNWARFHMQHTAGTFASFFAWRVTKGGLLVDAKDVIPAPDAEAYIAMALITAHRKWGSTPAYPYKAEALRLLRVMGQWQRGFFSRDGKATFNPTDWGSTHSNPSYHLPHFYEAFARFMANEGESRASGFWSGAARKSRFYFHVASNKKTGLMPDYTTLDGKPAPDPNLGGHTNFQWDAWRAPANVAVDWAWWNADGWQPKFADRILAFFASQG-PEYASQYTTDGQVADNNTGHDPGLVAMNAVVVLAARDQALKPSFVRELWDLPIPSGKGRYYPAMLYMMSLLHCSGKFKAYF 735          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|648292554|ref|WP_026073703.1| (glycoside hydrolase [Acetivibrio cellulolyticus])

HSP 1 Score: 332.798 bits (852), Expect = 1.984e-102
Identity = 185/432 (42.82%), Postives = 262/432 (60.65%), Query Frame = 0
Query:  341 ILLAGLALCVILAAVHLPIRLNKQKNVRGEPLTFSPPEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGM---GDPRRG--MFTK-HGEVTLNPVR--PVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDL---AGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYR 760
             +L  L + ++L A+  PI  N  K   G                GA E   YRNLFAE + KS +E++ KLQ  +  +F GD ST+ ++ PVG     DK  Y+++     V SE MSYGMM+ VQ D+++ FD LW WA  YM H  G++KGFFAW+CS +G K+D TPA D EE+ AT+L+FA+NRW    G Y+Y  EA ALL  M    D   G  MF K   +V   P       ++PSYHLP FYE+WA +    G+ +  SF+  AA  SR+   KA +  TGL+ DY +++G   KD+   +GH++F++DAWRV +N+AVD++WW +D+WQ   AD +Q F  ++GI  Y + + ++G+ L   HS GLVA+NAVASLA+T++  ++ FV ELW  +IP  +WRYY+GML  + LL  SG ++
Sbjct:    4 CILYLLTISLVLTALSFPIGKNSVKAASG----------------GAYETNTYRNLFAE-IGKSQSEIDAKLQKAFDQMFYGDDSTQRLFYPVGT----DK-AYIMDVGDNDVRSEGMSYGMMICVQMDKKKEFDMLWKWAKEYMYHADGQFKGFFAWQCSTSGSKMDNTPASDGEEYFATSLLFASNRWGDGTGIYNYSAEAKALLDAMLHQSDDGVGVNMFNKTEKKVVFCPTSGADAFSDPSYHLPAFYELWALW----GE-KDNSFWSDAASASRQFFQKATNSTTGLAPDYANFDG-SPKDVSWSSGHADFRFDAWRVASNIAVDYAWWGKDSWQVTFADRIQGFFYKEGISSYGNQFTVSGSKLSSDHSPGLVAMNAVASLASTNK--SNEFVEELWKVSIPSGKWRYYDGMLYMMGLLHCSGNFK 405          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|1082893337|gb|OGC02117.1| (hypothetical protein A2V82_00785 [candidate division KSB1 bacterium RBG_16_48_16])

HSP 1 Score: 294.664 bits (753), Expect = 2.564e-88
Identity = 168/427 (39.34%), Postives = 240/427 (56.21%), Query Frame = 0
Query:  348 LCVILAAVHLPIRLNKQKNVRGEPLTFSPPEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGMGDPRR---------GMFT-KHGEVTLNPVRPV--ITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHS-NFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYR 760
              + ++ +    +   Q +       +S P  HI    GA   G+Y NLF E+L  S+++V  K+   W  LF GD  T+ +Y PV   P+   + Y+ +T    + SE MSYGMM+AVQ ++R  FD LW WA  YM+H +G  K +FAW+    G  +D   A D EEWI  AL FA+ RW +  G Y+Y+ EA A+L  M +             MF  K  ++   PV      ++PSYHLPHFYE+WAR+ +   Q     F+  AA  SRR L KA    TGL  DY  ++G  +    G S +F++DAWRV  N+AVD++W+ +D W   +++ +  F   QG+  Y + + L+G  L   HS GLVA+NAVASLA+T+ +  + FV ELWNA+IP    RYY+G+L  L++LQVSG +R
Sbjct:   11 FFIPMSVIIFSCQCFSQHDSASAQANYSAP--HISQPAGAYYSGVYPNLFQELLGISESQVHAKIDSAWNQLFYGDDQTQRVYYPV--EPD---MAYIEDTWHNDIRSEGMSYGMMIAVQLNKRAEFDRLWKWAKTYMQHKSGARKNYFAWQLHTNGAMMDHNSASDGEEWIVMALFFASARWGNGTGIYNYQSEAQAILDAMLNKEETSDNDTTITNMFNKKEKQIVFVPVGNADDFSDPSYHLPHFYELWARWADKENQ-----FWCDAASASRRFLKKAAHPKTGLLPDYAHFDGTPIDPWNGGSDDFRFDAWRVAMNLAVDYTWFAKDDWAVEQSNIMLRFFHDQGVGTYGNLFTLDGVKLSDDHSTGLVAMNAVASLASTN-DFRTDFVRELWNASIPSGAGRYYDGLLYMLAMLQVSGNFR 424          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|1125034354|gb|OLA00465.1| (hypothetical protein BHW11_10790 [Clostridium sp. CAG:62_40_43])

HSP 1 Score: 308.531 bits (789), Expect = 4.246e-88
Identity = 164/394 (41.62%), Postives = 238/394 (60.41%), Query Frame = 0
Query:  377 PEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGM---GDPRRG--MFTK-HGEVTLNPVRPVIT--NPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRS 761
            P+      +GA     YRNLF E+ + SDAE+++K++  W+ LF G+   E IY PVGE      + Y+   ++  V SE MSYGMM+ VQ D++E F+ LW WA  YM+H +G +KG+FAW+    G K+ GTPA D EE+ AT+L+FA+ RW + +G Y+Y KEA  +L  M    D  +G  MF K H      P+    T  +PSYHLP FYEVWA         Q   F+ +AAE SR+    A ++ TGL  DY++Y G   K+   H +F++DAWR+ AN+A D++WW +D W    A+ +Q+F   QG+  Y + ++L+G  L   HS GLVA+NA ASLA++D+   S F+ +LWN +    ++RYY+G L  + LL  SG++R+
Sbjct:  395 PDAPTPASMGAVYTEKYRNLFKELGY-SDAEIDEKVESAWKKLFYGN-DEERIYYPVGE-----DMAYIYTADTDDVRSEGMSYGMMICVQMDKQEEFNRLWKWAKTYMQHTSGEFKGYFAWQMKTDGSKISGTPASDGEEYFATSLLFASARWGNGEGIYNYNKEAQEILTTMLHQADDGQGVNMFDKTHKMPVFCPIGNAATYSDPSYHLPAFYEVWAIKAE-----QDNDFWSEAAEASRQHFKDATNEKTGLGPDYSEYTG-AAKNEGNHGDFRFDAWRIAANIACDYAWWAKDTWATTHANRIQSFFYDQGVDSYGNQWSLDGKNLGPDHSPGLVAMNATASLASSDKKSWS-FLEDLWNISPTTGKYRYYDGCLYMMGLLHCSGKFRA 774          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|647257122|ref|WP_025705725.1| (hypothetical protein [Paenibacillus graminis])

HSP 1 Score: 300.827 bits (769), Expect = 7.217e-88
Identity = 163/384 (42.45%), Postives = 226/384 (58.85%), Query Frame = 0
Query:  384 MLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALL---LGMGDPRRGMFT-KHGEVTLNPVRPV--ITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYR 760
            + GA   G+YRNLF E   KSDAE++ K+   ++ LF GD  T+ IY PVG       + Y+L+  +  V SE MSYGMM+AVQ D++  FD LW WA  YM++ +G  +G+FAW+   +G K+D  PA D EE+  TAL+FA NRW S  G Y+Y  EA  LL   L     ++ +F     +V   P       ++PSYHLP FYE+WA + N+  Q      +  AA  SR    K     TGL  DY +++G    +   H +F++DAWR + NVA+D+ W+ +D+WQ+  AD +Q F   QGI  Y + Y+L+G++L   HS GLVA NAV +LAAT    +  FV E WN +IP  Q+RYY+G L  LSLL  SG ++
Sbjct:  169 ITGAFYSGVYRNLFKE-FGKSDAEIDAKVNTAFQQLFYGDNDTQRIYYPVGT-----DMAYILDKANNDVRSEGMSYGMMIAVQLDKKAEFDRLWKWAKTYMQNTSGTQQGYFAWQVDTSGNKIDTNPASDGEEYFITALLFAANRWGSGTGIYNYSTEAQTLLDRVLTPNSDQKTLFDLTQKQVVFVPYGSAAGFSDPSYHLPAFYELWALWDNNNNQ-----LWRDAAATSREFFKKQAHSTTGLGPDYAEFDGR-PNNTGNHGDFRFDAWRTIMNVAMDYHWFAKDSWQKTYADRVQNFFHGQGIGAYANQYSLSGSSLSTDHSPGLVATNAVGTLAATTTK-SWEFVNEFWNTSIPSGQYRYYDGCLYMLSLLHASGNFK 539          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|497762032|ref|WP_010076216.1| (glycoside hydrolase [Clostridium cellulovorans] >gi|302576918|gb|ADL50930.1| glycoside hydrolase family 8 [Clostridium cellulovorans 743B])

HSP 1 Score: 288.886 bits (738), Expect = 9.971e-86
Identity = 159/389 (40.87%), Postives = 230/389 (59.13%), Query Frame = 0
Query:  386 GAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGM---GDPRRGM---FTKHGEVTLNPVRPV--ITNPSYHLPHFYEVWARFL---NDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGV--GVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYR 760
            GA     YRNLF E   K+ A+V++K+   +   F G+   + IY PVG       +GY+ +  +  V +EAMSYGMM+AVQ D+++ FD +W WA  YM H  G++KG+FAW+C   G+ LD TPAPD EE+   +L+FA NRW +  G ++Y+ EA  ++  M    D   G+    + + ++   P+  V   T+PSYHLP FY++WA +    NDR        +   A+ SR    K V   TGLS +Y +++G    V  ++G  N+ +DAWR +AN +VD++WW +D WQQ  A+ LQ F   QG+  Y   Y ++GT +   HSVG+VA+NAV SLAAT+ + A+ FV ELWN   P   WRY+NG L  L LL+ SG ++
Sbjct:   32 GAYYTNTYRNLFVES-GKTQAQVDEKINKMFNQYFYGN-DDQRIYYPVGT-----DMGYIKDIGNNDVRTEAMSYGMMIAVQLDKKDEFDRIWKWARTYMYHPDGQFKGYFAWQCDTNGKILDNTPAPDGEEYFVMSLLFAANRWGNGSGIFNYKAEAQGIMDAMLHQADDGVGVNFFNSTNNQIVFCPIPDVATFTDPSYHLPAFYDLWALWADKDNDR--------WATIAKTSREFFKKTVHPTTGLSPEYANFDGSPKEVSWISGRGNYSYDAWRTIANSSVDYAWWGKDPWQQTFANNLQNFFYSQGLSSYVDKYTVSGTKVGVDHSVGVVAMNAVGSLAATNSH-ATEFVNELWNTYAPTGTWRYFNGSLYLLGLLECSGNFK 404          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|524665190|emb|CDD73951.1| (endo-1 4-beta-xylanase [Clostridium sp. CAG:62])

HSP 1 Score: 296.204 bits (757), Expect = 1.169e-85
Identity = 162/395 (41.01%), Postives = 238/395 (60.25%), Query Frame = 0
Query:  377 PEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGM---GDPRRG--MFTK-HGEVTLNPV--RPVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLK-SHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRS 761
            P+      +GA   G YRNLF E+ + SDAE++KK++  W+  F G    E IY PVGE      + Y+   ++  V SE MSYGMM+ VQ D++E F+ LW WA  YM+H +G+Y+G+FAW+ +  G+  D TPA D EE+ AT+L+FA+ RW + +G Y+Y KEA  +L  M    D   G  MF + H      P+      ++PSYHLP FYEVWA         Q   F+ +AAE SR+    A ++ TGL  DY++Y G   K    H++F++DAWR+ AN+A D++WW +D+W    A+ +Q+F   QG+  Y + ++L+G  L    HS GLVA+NA ASLA++D+   S F+ +LWN +    ++RYY+G L  + LL  SG++R+
Sbjct:  123 PDAPTPASVGAVSTGKYRNLFKELGY-SDAEIDKKVESAWQKFFYG-TDEERIYYPVGE-----DMAYIYTADTDDVRSEGMSYGMMICVQMDKQEEFNRLWKWAKTYMQHKSGQYEGYFAWQMNKDGKIKDDTPAADGEEYFATSLLFASARWGNGKGIYNYNKEAQEILKTMLHQADDGVGVNMFDRTHKMPVFCPIGNAATFSDPSYHLPAFYEVWAIKAE-----QDNDFWREAAEASRQHFKDATNEKTGLGPDYSEYSGT-AKHEGNHADFRFDAWRIAANIACDYAWWAQDSWATTHANRIQSFFYDQGVDSYGNQWSLDGKNLNSPDHSPGLVAMNATASLASSDKKSWS-FLEDLWNISPTTGKYRYYDGCLYMMGLLHCSGKFRA 503          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|1033477893|dbj|BAV13036.1| (xylanase [Clostridium cellulovorans])

HSP 1 Score: 288.886 bits (738), Expect = 1.197e-85
Identity = 159/389 (40.87%), Postives = 230/389 (59.13%), Query Frame = 0
Query:  386 GAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGM---GDPRRGM---FTKHGEVTLNPVRPV--ITNPSYHLPHFYEVWARFL---NDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGV--GVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYR 760
            GA     YRNLF E   K+ A+V++K+   +   F G+   + IY PVG       +GY+ +  +  V +EAMSYGMM+AVQ D+++ FD +W WA  YM H  G++KG+FAW+C   G+ LD TPAPD EE+   +L+FA NRW +  G ++Y+ EA  ++  M    D   G+    + + ++   P+  V   T+PSYHLP FY++WA +    NDR        +   A+ SR    K V   TGLS +Y +++G    V  ++G  N+ +DAWR +AN +VD++WW +D WQQ  A+ LQ F   QG+  Y   Y ++GT +   HSVG+VA+NAV SLAAT+ + A+ FV ELWN   P   WRY+NG L  L LL+ SG ++
Sbjct:   44 GAYYTNTYRNLFVES-GKTQAQVDEKINKMFNQYFYGN-DDQRIYYPVGT-----DMGYIKDIGNNDVRTEAMSYGMMIAVQLDKKDEFDRIWKWARTYMYHPDGQFKGYFAWQCDTNGKILDNTPAPDGEEYFVMSLLFAANRWGNGSGIFNYKAEAQGIMDAMLHQADDGVGVNFFNSTNNQIVFCPIPDVATFTDPSYHLPAFYDLWALWADKDNDR--------WATIAKTSREFFKKTVHPTTGLSPEYANFDGSPKEVSWISGRGNYSYDAWRTIANSSVDYAWWGKDPWQQTFANNLQNFFYSQGLSSYVDKYTVSGTKVGVDHSVGVVAMNAVGSLAATNSH-ATEFVNELWNTYAPTGTWRYFNGSLYLLGLLECSGNFK 416          
BLAST of EWM25803.1 vs. NCBI_GenBank
Match: gi|81537385|gb|ABB71891.1| (xylanase [uncultured bacterium])

HSP 1 Score: 283.493 bits (724), Expect = 1.110e-84
Identity = 169/398 (42.46%), Postives = 232/398 (58.29%), Query Frame = 0
Query:  386 GAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYK--GFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMS-QGRYDYEKEAVALLLGMGDPRRGMFTKHG-------------EVTLNPVRPVI-----TNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVG--VKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYR 760
            GA   G YRNLF E  + S  EV +K+   +  LF GD +++ +Y P GE   G+ +GY+ +  SG V SE MSYGMM+ VQ D+++ FDALW+WA  YM H    +   G+FAW  S  GR  D  PAPD EE+ A AL FA NRW + +G Y+Y+ +A  L+  M D  R + T                E  +    P I     T+PSYHLP FYE+WA +    G  + + F+ +AA+ SR     + +  TGL+ DY +++G           +NFQ+DAWR V N +VDW+WW +D  Q+  +D LQAF   +GI DY +T+ L+G  +   HS GLVA+NA ASLAAT+   A  FV ELWNA+IP  Q+RYY+GML  ++LL  SG ++
Sbjct:    5 GAFYTGKYRNLFLEAGY-SQIEVTEKISRAFEQLFYGDRNSQTVYYPAGENDNGE-MGYLSDVNSGDVRSEGMSYGMMICVQLDKKKEFDALWNWAKTYMYHSNPAHPAYGYFAWSLSTEGRHKDQMPAPDGEEYFAMALYFAANRWGNGEGIYNYKAQADRLVSDMKD--RNIITGQVGEQIQSAGNIFSLEYKMIRFTPDIANSEHTDPSYHLPAFYELWALW----GPEKDSDFWKEAAKVSRDFFFISANPKTGLTPDYANFDGTPWVCPWNPNAANFQYDAWRTVMNWSVDWAWWEKDERQRELSDRLQAFFESRGISDYGATFTLDGVPIGGDHSQGLVAMNATASLAATNER-AHRFVRELWNASIPDGQYRYYDGMLYLMALLHCSGDFK 393          
The following BLAST results are available for this feature:
BLAST of EWM25803.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553195266|ref|XP_005856116.1|0.000e+0100.00glycoside hydrolase family 8 [Nannochloropsis gadi... [more]
gi|585110978|gb|EWM28560.1|1.752e-10242.21glycoside hydrolase family 8 [Nannochloropsis gadi... [more]
gi|648292554|ref|WP_026073703.1|1.984e-10242.82glycoside hydrolase [Acetivibrio cellulolyticus][more]
gi|1082893337|gb|OGC02117.1|2.564e-8839.34hypothetical protein A2V82_00785 [candidate divisi... [more]
gi|1125034354|gb|OLA00465.1|4.246e-8841.62hypothetical protein BHW11_10790 [Clostridium sp. ... [more]
gi|647257122|ref|WP_025705725.1|7.217e-8842.45hypothetical protein [Paenibacillus graminis][more]
gi|497762032|ref|WP_010076216.1|9.971e-8640.87glycoside hydrolase [Clostridium cellulovorans] >g... [more]
gi|524665190|emb|CDD73951.1|1.169e-8541.01endo-1 4-beta-xylanase [Clostridium sp. CAG:62][more]
gi|1033477893|dbj|BAV13036.1|1.197e-8540.87xylanase [Clostridium cellulovorans][more]
gi|81537385|gb|ABB71891.1|1.110e-8442.46xylanase [uncultured bacterium][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4844rna4844Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications