EWM25797.1, cds4828 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|585107664|gb|EWM25797.1| (deoxynucleotidyltransferase terminal-interacting protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 Query: 1 MVFKKRKPKLVKQRQDGKPPEEVSGGVHRGKILMAEGESNATTKQMRIVFQLRHDCTFQKIDTTLSTEVIGKHNMSKRIAFFHRHPSSPQAINKSVENSSPGDRADAQMGKKPIHDDESEEDSGNGMILLDATPSHALLPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRKVNSGAVLHRKGAGGGITGMKTTQGVYERDKEREQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 MVFKKRKPKLVKQRQDGKPPEEVSGGVHRGKILMAEGESNATTKQMRIVFQLRHDCTFQKIDTTLSTEVIGKHNMSKRIAFFHRHPSSPQAINKSVENSSPGDRADAQMGKKPIHDDESEEDSGNGMILLDATPSHALLPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRKVNSGAVLHRKGAGGGITGMKTTQGVYERDKEREQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR Sbjct: 1 MVFKKRKPKLVKQRQDGKPPEEVSGGVHRGKILMAEGESNATTKQMRIVFQLRHDCTFQKIDTTLSTEVIGKHNMSKRIAFFHRHPSSPQAINKSVENSSPGDRADAQMGKKPIHDDESEEDSGNGMILLDATPSHALLPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRKVNSGAVLHRKGAGGGITGMKTTQGVYERDKEREQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|553195280|ref|XP_005856119.1| (rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526] >gi|422292954|gb|EKU20255.1| rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 517.694 bits (1332), Expect = 3.960e-173 Identity = 250/252 (99.21%), Postives = 252/252 (100.00%), Query Frame = 0 Query: 90 QAINKSVENSSPGDRADAQMGKKPIHDDESEEDSGNGMILLDATPSHALLPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRKVNSGAVLHRKGAGGGITGMKTTQGVYERDKEREQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 +AINKSVENSSPGDRADAQMGKKPIHDDESEEDSGNGMILLDATPSHALLPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRKVNSGAVLHRKGAGGGITGMKTTQGVYERDKER+QDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR Sbjct: 804 EAINKSVENSSPGDRADAQMGKKPIHDDESEEDSGNGMILLDATPSHALLPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRKVNSGAVLHRKGAGGGITGMKTTQGVYERDKERKQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 1055
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|1191067959|ref|XP_020912527.1| (rRNA-processing protein fcf2-like isoform X1 [Exaiptasia pallida] >gi|999984454|gb|KXJ23595.1| rRNA-processing protein fcf2 [Exaiptasia pallida]) HSP 1 Score: 110.153 bits (274), Expect = 1.913e-24 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 0 Query: 239 EREQDAKMLLMRNYMDPKRFYKGLEG--LAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 E EQD K+L +RN +D KR YK + L FQVGTV+EG D +R+ +RDRK T VDE+LAD RRY+KKK+L IQ +K++G+KG Y+ + + KP WAR Sbjct: 177 EIEQDLKILKLRNVLDRKRHYKKNDSKTLPKYFQVGTVVEGAADFYSSRLSKRDRKSTIVDELLADTEFRRYNKKKYLEIQSSKQSGKKGFYKKKMNRRKPNWAR 281
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|156365626|ref|XP_001626745.1| (predicted protein [Nematostella vectensis] >gi|156213633|gb|EDO34645.1| predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 101.293 bits (251), Expect = 9.612e-23 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 0 Query: 239 EREQDAKMLLMRNYMDPKRFYKGLEG--LAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 E +Q+ K+L MR+ +DPKR YK + L FQ+GTV+EG D +R+P+R RK V E+LAD RRY+KKKFL IQ K++GRKG Y+ + + KP WAR Sbjct: 19 ELKQELKVLKMRHILDPKRHYKKNDSKELPKYFQMGTVVEGAADFYSSRIPKRSRKNNIVQELLADAQFRRYNKKKFLEIQAAKESGRKGFYKKKTNRRKPAWAR 123
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|891579138|ref|XP_013021626.1| (rRNA processing protein Fcf2 [Schizosaccharomyces cryophilus OY26] >gi|528318808|gb|EPY53382.1| rRNA processing protein Fcf2 [Schizosaccharomyces cryophilus OY26]) HSP 1 Score: 95.5153 bits (236), Expect = 2.070e-19 Identity = 67/206 (32.52%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 139 LPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRK-VNSGAVLHRKGAGGGITGMKTTQGVYERDKEREQDAKMLLMRNYMDPKRFYK--GLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 LP+Q + + LG + PSYFQ + + +K +V N + SS++ H+P + + AGG M T E + ++D ++L MRN +DPKR Y+ + + FQ GTVIEG D +R+P R+RK T DE++ D R Y KKK+L IQ++K +GRKG Y+ +++ KP + + Sbjct: 35 LPKQNWVPKIPHLLG-----SACNLPSYFQQKNVPCVKKDELVSNVPSYV-DESSSIEEPTTLNPHVPAPGITKKKKAVKDTAGGDWFDMPAT----ELTESVKRDIQLLKMRNVLDPKRHYRRENAKQMPKYFQTGTVIEGPQDYFSSRIPTRERKSTITDELVNDTERRGYFKKKYLEIQKSKMSGRKGQYKKLKERRKPSYLK 230
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|765555438|gb|KJE96029.1| (hypothetical protein, variant [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 90.8929 bits (224), Expect = 1.412e-18 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 239 EREQDAKMLLMRNYMDPKRFYKGLE--GLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 E E+D ++L MRNY+DPK+ +KG + L FQ+ V+EG + +R+ R++RK T VDE++AD +R+Y K+KF+ I++ GR+G + QQK KP W R Sbjct: 49 EVERDLRLLRMRNYLDPKKHFKGSDSKALPKHFQIARVVEGPTEFYSSRLTRKERKNTLVDELMADDRLRKYHKRKFVEIEQRNAQGRRGHVKRLQQKRKPAWMR 153
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|765555437|gb|KJE96028.1| (hypothetical protein CAOG_006402 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 92.4337 bits (228), Expect = 1.462e-18 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 239 EREQDAKMLLMRNYMDPKRFYKGLE--GLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 E E+D ++L MRNY+DPK+ +KG + L FQ+ V+EG + +R+ R++RK T VDE++AD +R+Y K+KF+ I++ GR+G + QQK KP W R Sbjct: 102 EVERDLRLLRMRNYLDPKKHFKGSDSKALPKHFQIARVVEGPTEFYSSRLTRKERKNTLVDELMADDRLRKYHKRKFVEIEQRNAQGRRGHVKRLQQKRKPAWMR 206
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|162312474|ref|NP_594087.3| (rRNA processing protein Fcf2 (predicted) [Schizosaccharomyces pombe 972h-] >gi|74582127|sp|O42877.1|FCF2_SCHPO RecName: Full=rRNA-processing protein fcf2 >gi|2706466|emb|CAA15924.1| rRNA processing protein Fcf2 (predicted) [Schizosaccharomyces pombe]) HSP 1 Score: 92.0485 bits (227), Expect = 3.472e-18 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 243 DAKMLLMRNYMDPKRFYK--GLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 D ++L MRN +DPKR Y+ + + FQVG+++EG D +R+P R+RK T VDE+L D R Y KKK+L +Q++K +GRKG Y+ QQ+ KP + + Sbjct: 130 DIQLLKMRNALDPKRHYRRENTKSMPKYFQVGSIVEGPQDFYSSRIPTRERKETIVDELLHDSERRSYFKKKYLELQKSKMSGRKGQYKKLQQRRKPSYLK 230
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|754350629|ref|XP_004345151.2| (hypothetical protein CAOG_06402 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 92.4337 bits (228), Expect = 3.550e-18 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 239 EREQDAKMLLMRNYMDPKRFYKGLE--GLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPKWAR 341 E E+D ++L MRNY+DPK+ +KG + L FQ+ V+EG + +R+ R++RK T VDE++AD +R+Y K+KF+ I++ GR+G + QQK KP W R Sbjct: 142 EVERDLRLLRMRNYLDPKKHFKGSDSKALPKHFQIARVVEGPTEFYSSRLTRKERKNTLVDELMADDRLRKYHKRKFVEIEQRNAQGRRGHVKRLQQKRKPAWMR 246
BLAST of EWM25797.1 vs. NCBI_GenBank
Match: gi|1176108396|ref|XP_020625135.1| (deoxynucleotidyltransferase terminal-interacting protein 2-like [Orbicella faveolata]) HSP 1 Score: 91.6633 bits (226), Expect = 1.633e-17 Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 239 EREQDAKMLLMRNYMDPKRFYKGLE--GLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHK 336 E EQD K++ MRN +D KR YK + L FQ+GTV+EG D +R+P+R RK +DE+L+D RRY+KKK+L IQ K++G+KG ++ + K K Sbjct: 189 EIEQDMKVIKMRNILDRKRHYKKNDSSALPKYFQIGTVVEGSADFYTSRIPKRQRKSNLIDELLSDAEFRRYNKKKYLEIQAAKQSGKKGFHKKKTNKRK 288 The following BLAST results are available for this feature:
BLAST of EWM25797.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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