EWM25826.1, cds4821 (CDS) Nannochloropsis gaditana

Overview
NameEWM25826.1
Unique Namecds4821
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:467521..469048 -
Alignment locationCM002464.1:467059..467244 -
Alignment locationCM002464.1:466250..466845 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25826.1
Productconserved oligomeric golgi complex subunit 4 isoform 1
Orig transcript idgnl|cribi|Naga_100021g4.8769.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:467521..469048 -
CM002464.1supercontigCM002464.1:467059..467244 -
CM002464.1supercontigCM002464.1:466250..466845 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR013167COG_su4
Homology
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|585107693|gb|EWM25826.1| (conserved oligomeric golgi complex subunit 4 isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 1578.92 bits (4087), Expect = 0.000e+0
Identity = 769/769 (100.00%), Postives = 769/769 (100.00%), Query Frame = 0
Query:    1 MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLAEVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLDGIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADVHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESLIFK 769
            MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLAEVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLDGIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADVHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESLIFK
Sbjct:    1 MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLAEVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLDGIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADVHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESLIFK 769          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|585107694|gb|EWM25827.1| (conserved oligomeric golgi complex subunit 4 isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 1170.22 bits (3026), Expect = 0.000e+0
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0
Query:    1 MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLAEVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLDGIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSG 572
            MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLAEVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLDGIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSG
Sbjct:    1 MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLAEVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLDGIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSG 572          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|553195311|ref|XP_005856124.1| (component of oligomeric golgi complex 4 [Nannochloropsis gaditana CCMP526] >gi|422292959|gb|EKU20260.1| component of oligomeric golgi complex 4 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1090.87 bits (2820), Expect = 0.000e+0
Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 0
Query:  240 MIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADVHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESLIFK 769
            MIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADVHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESLIFK
Sbjct:    1 MIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADVHYLMMLKPDIVQQPACGLGEHNSKEDKPKSAEVVGRLTPAEVKQILKQRVEFDPRAVESLIFK 530          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|299473571|emb|CBN77966.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 110.153 bits (274), Expect = 9.595e-22
Identity = 112/434 (25.81%), Postives = 182/434 (41.94%), Query Frame = 0
Query:  345 NRYLAFVA----APREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSV-PSFAAALQALVEDR------------------------SLTGVEAGGGAMDQFS----------RALQQQLDEEEGNVTHEAMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGD-PFVTQFLD------------------YMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEK---------------EFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPAD 705
            +RYL FVA     P ++  + + QV+ + G YV +E AYC  +V +A+   +P EVQ+G  VS++VED   ++++S+ R+  T S+QAI+AV +R TE+L P +  PSF   L    + R                        S    +A   A D+ S          RA      EE G V  E  +  INS+  A++++  +QD L              +       +V  +  E  R+L+ Y    +  L+D     +S  +   L+   G ++Y +    YE  +   GD P   + L                              C+A +        V R+A  ++  +  A   K                FTEWG + LR++VR LQ+ L  L++   +L  +F  ++++V LLN + PAD
Sbjct:    9 HRYLDFVADDLGLPEDQSSEFYAQVRLIEGAYVQLEDAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKSLRRSVSTRSEQAIMAVCNRVTEILDPHAPEPSFFGGLATEADHRVPVGGGEGGGGDGEKGGDQQPDDFSTALAKALEEAADEHSGPRGEGSGDGRAAGSGAGEEFGEV--EGAMVGINSVHVALSSVSAIQDAL-------------NRFLEASNPLVGLMLDEVARILRSYKDLRDSRLNDVLE-ALSPPVSSALANAFGSSSYALGPAQYELRS---GDLPGARRVLHAATRAMTGSDNSGESGGGGGGAGADADGGCRAALLQEPFEELVRRLASRVAAGVEMAARAKGHGGGGGGGAGGGGGGFTEWGALLLRKEVRTLQQGLAALMETD-SLNMEFGDLNELVRLLNFERPAD 422          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|695425505|ref|XP_009529194.1| (hypothetical protein PHYSODRAFT_315742 [Phytophthora sojae] >gi|348675627|gb|EGZ15445.1| hypothetical protein PHYSODRAFT_315742 [Phytophthora sojae])

HSP 1 Score: 96.2857 bits (238), Expect = 7.125e-17
Identity = 115/468 (24.57%), Postives = 216/468 (46.15%), Query Frame = 0
Query:  296 ALKLLKWYSEDCSVREWQERC-----------LSARGTE-DLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLF-----------IQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAA-----ALQALVEDRSLTGVEAGGGAMD---------QFSRALQQQLDEE-EGNVTHEA-MIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPH---MVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLS-QVVGRTNYTIDATTYEKEAAG-RGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQAL--EEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADV-HYLMMLKPDI 716
            AL++++ Y+ D  +  W+ R            L     E D  +Q +D  LDEL  ++ +   Y AF+A     C  L            ++VQEL+G YV +E  Y   +V KA A  +P E+++GV VS++VEDV  +LN++  RA+Q ++    L++     + L    +P+  +      +  L    + +  + G G +D          FS  L Q +D++ E  +  EA +I  INS   +   ++ +Q+ + E             RA G P+   ++E +    G +   +   +   + +  SR +   +L+ +  Q+  R  Y +  T+ E +A G RG P + + ++   +K++ L+  +  +  +     VE V   L+  + +AL   +K   + G ++L ++V  +  ++  LV    +L   F R+ Q+V +LNL  P+ V  YL  ++ ++
Sbjct:  147 ALQMVEMYAGDARMVAWERRANAQAQRDPRQALEGEDVEADESLQMIDLFLDELAFIIRVLVSYTAFLATV---CAGLGQQMESGEGGFQVKVQELSGVYVVLERFYVFQSVHKATAIAEPQELEQGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIALVDALESQYLPAILSLPSRPCVIPLSVANATSDKDNGSGRLDGDGDGEDEVSFSEMLLQAVDDDLERTLQEEARLIMTINSAFMSGEFVRALQEKIDEYS-----------RA-GFPNDAPILECLPTPIGDMTDAFHSIVSNEVQEVLSRSLRKRLLEVIQRQMEERLKYVL--TSAEYDALGSRGSPLL-RLVEQEVLKNRELKRYERALCSAPFEDLVEAVTQDLTSGVERALLTTKKHCNDLGALQLEREVTNMLARVSTLVP-QKSLRSAFTRLFQIVFILNLMQPSHVLDYLASVREEL 595          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|301123221|ref|XP_002909337.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100099|gb|EEY58151.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 90.8929 bits (224), Expect = 2.579e-15
Identity = 150/625 (24.00%), Postives = 267/625 (42.72%), Query Frame = 0
Query:  126 MLEDCERKTG---DVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSA---------RGTE---DLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMD----LFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEE-EGNVTHEAM-IYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVG-RTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQAL--EEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQ------FARVDQMVTLLNLDSPADV-HYLMMLKPDIVQQ 719
            ML  CE K     D  L+ L++A +    D  AA A F  CV L    +A + +   L    I +T+ A  +LD VR       GS  +   +  G   D   +V  LS LL  A+ ++ ++         + + D +                    L +++  ++    + AL++++ Y++D  +  W+ R  S           G E   D  +Q +D  LDEL  ++ +   Y AF+A   E          ++VQEL+G YV +E  Y   +V KA A  +P E+++GV VS++VEDV  +LN++  RA+Q ++    L++     + L        +  LQA++   S   V         FS  L Q +DE+ E  +  EA  I  INS   +   ++ +QD + E          S       P ++E +      + + +   +   + +  SR +   +   L+  +  +  Y + +  Y+     +G P V + ++   V ++ L+  +  +  +     VE     L+  + +AL   +K   + G ++L ++V        E++    TL+PQ      F R+ Q+V +LNL  P+ V  YL  L+ +   Q
Sbjct:   31 MLRSCEAKAQSLQDTALSHLQQACAGSNVDVDAALAAFARCVFLGAAREAVSKFSSCLSG--IFATQ-ARASLDRVR-------GSKQAAKANEHGYI-DRAFYVKSLSELLTGATDIMNAVA--------DVTADPQV-------------------LKQVLEPIHVSCAEIALQMVQMYADDARMVAWERRANSQAQRDPRRVLEGDEVEADESLQMIDLFLDELAFIIRVLVSYTAFLATVCEGLGQKDGGFQVKVQELSGVYVVLERFYVFQSVHKATAIAEPQELEQGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIAIVDALE-------SQYLQAILVLPSRPCVS--------FSDMLLQAVDEDLERTLQEEARPIMTINSAFASGEFVRALQDKIDEFS--------SASFPTDAP-ILECLPTPIHDMTEAFHSIVSNEIQEMLSRTLHKRLPQILNHSMDEQLQYVLTSAQYDA-LGSQGSPLV-RLVEREIVTNRELQRYEQALCRAPFEDLVEAATQYLTSCVEKALLTSKKRCNDLGALQLEREV-------TEMLTRMSTLVPQRSLRGAFTRLFQVVFVLNLMQPSHVLDYLASLREEFSAQ 584          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|566030163|gb|ETI53074.1| (hypothetical protein F443_03930 [Phytophthora parasitica P1569] >gi|568055893|gb|ETM52627.1| hypothetical protein L914_03785 [Phytophthora parasitica])

HSP 1 Score: 89.3521 bits (220), Expect = 1.063e-14
Identity = 148/637 (23.23%), Postives = 267/637 (41.92%), Query Frame = 0
Query:  122 VQQEMLEDCERKTG---DVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGP-CLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSA---------RGTE---DLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMD----LFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDS------VPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEE-EGNVTHEA-MIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRT-----NYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQAL--EEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQ------FARVDQMVTLLNLDSPADV-HYLMMLKPDI 716
            V+ EML +CE K     D  L+ L++A +    D  AA   F  C  L    +A   +   L    I +T+ A  +LD VR       GS  +   +  G   D   +V  LS LL  A+ ++ ++                            +   + P  L +++  ++    + AL++++ Y++D  +  W+ R  S           G E   D  +Q +D  LDEL  ++ +   Y AF+A   E          ++VQEL+G YV +E  Y   +V KA A  +P E+++GV VS++VEDV  +LN++  RA+Q ++    L++     + L          +PS    +  L    + TG +        FS  L Q +DE+ +  +  EA +I  INS   +   ++ +Q+ + E          S       P ++E +      + + +   +   + +  SR +       L QV+ R+      Y + +  Y+     +G P V + ++   + ++ L+  +  +   +    VE     L+  +  AL   +K   + G ++L ++V        +++    TL+PQ      F R+ Q+V +LNL  P  V  YL  L+ + 
Sbjct:   46 VRDEMLRNCEAKAQTLQDTALSRLQQACAGSDVDVDAALTAFTRCAALNAAQEAVPKFSSCLSG--IFATQ-ARASLDRVR-------GSKQAAKVNEHGYI-DRAFYVESLSELLTGATDIMNAV----------------------------ADVTADPLVLKQILEPIHASCAKIALQMVQMYADDARMVAWERRANSQAQRDPRHVLEGDEVEADESLQMIDLFLDELAFIIRVLVSYTAFLATVCEGLGQKDGGFQVKVQELSGVYVVLERFYVFQSVHKATAIAEPQELEQGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIAIVDALESQYLQAILVLPSRPCVI-PLSSINAATGQDGNNEQEVSFSDMLLQAVDEDLQRTLQEEARLIMTINSAYMSGEFVRALQEKIEEYS--------SSSFPNDAP-ILECLPTPIHDMTEAFHSIVSNEIQEMLSRTLHKR----LPQVLSRSMDEQLQYVLTSAQYDA-LGSQGSPLV-RLVEREILTNRELQRYERALCRVSFEDLVEAATQYLTSCVENALLSSKKRCNDLGALQLEREV-------TDMLTRMSTLVPQRSLRGAFTRLFQVVFILNLMQPVHVLDYLASLREEF 620          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|570993515|gb|ETP50855.1| (hypothetical protein F442_03921 [Phytophthora parasitica P10297])

HSP 1 Score: 88.1965 bits (217), Expect = 2.575e-14
Identity = 152/643 (23.64%), Postives = 270/643 (41.99%), Query Frame = 0
Query:  122 VQQEMLEDCERKTG---DVVLNLLRKATSAIAPDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRSLRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYYCEDESSQDAETGTAGSRHAARFSSWLSGP-CLARMVTSLNNIAQQQALKLLKWYSEDCSVREWQERCLSA---------RGTE---DLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMD----LFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRS------LTGVEAGGGAMDQ------FSRALQQQLDEEEGNVTHEA--MIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRT-----NYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQAL--EEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQ------FARVDQMVTLLNLDSPADV-HYLMMLKPDI 716
            V+ EML +CE K     D  L+ L++A +    D  AA   F  C  L    +AA  +   L    I +T+ A  +LD VR       GS  +   +  G   D   +V  LS LL  A+ ++ ++                            +   + P  L +++  ++    + AL++++ Y++D  +  W+ R  S           G E   D  +Q +D  LDEL  ++ +   Y AF+A   E          ++VQEL+G YV +E  Y   +V KA A  +P E+++GV VS++VEDV  +LN++  RA+Q ++    L++     + L        +  LQA++   S      L+ + A  G  D       FS  L Q +DE+      E   +I  INS   +   ++ +Q+ + E          S       P ++E +      + + +   +   + +  SR +       L QV+ R+      Y + +  Y+     +G P V + ++   + ++ L+  +  +   +    VE     L+  +  AL   +K   + G ++L ++V        +++    TL+PQ      F R+ Q+V +LNL  PA V  YL  L+ + 
Sbjct:   46 VRDEMLRNCEAKAQTLQDTALSRLQQACAGSDVDVDAALTAFARCAALNAAQEAAPKFSSCLSG--IFATQ-ARASLDRVR-------GSKQAAKVNEHGYI-DRAFYVESLSELLTGATDIMNAV----------------------------ADVTADPLVLKQILEPIHASCAKIALQMVQMYADDARMVAWERRANSQAQRDPRHVLEGDEVEADESLQMIDLFLDELAFIIRVLVSYTAFLATVCEGLGQKDGGFQVKVQELSGVYVVLERFYVFQSVHKATAIAEPQELEQGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIAIVDALE-------SQYLQAILVLPSRPCVIPLSSINAATGQDDNNEQEVSFSDMLLQAVDEDLQRTLQEEARLIMTINSAYMSGEFVRALQEKIEEYS--------SSSFPNDAP-ILECLPTPIHDMTEAFHSIVSNEIQEMLSRTLHKR----LPQVLSRSMDEQLQYVLTSAQYDA-LGSQGSPLV-RLVEREILTNRELQRYERALCRVSFEDLVEAATQYLTSCVENALLSSKKRCNDLGALQLEREV-------TDMLTRMSTLVPQRSLRGAFTRLFQVVFILNLMQPAHVLDYLASLREEF 620          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|813158614|ref|XP_012202437.1| (hypothetical protein SPRG_08079 [Saprolegnia parasitica CBS 223.65] >gi|641532776|gb|KDO26789.1| hypothetical protein SPRG_08079 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 87.8113 bits (216), Expect = 3.240e-14
Identity = 99/431 (22.97%), Postives = 177/431 (41.07%), Query Frame = 0
Query:  297 LKLLKWYSEDCSVREWQERCLSARGT--EDLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAAALQALVEDRSL--------------TGVEAGGGAMDQFSRALQQQLDEEEGNVTHE-----AMIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRTNYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQALEEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQFARVDQMVTLLNLDSPADV 706
            L +L  Y  D  +  W+ +     GT   D  +Q +D  LDEL  +L    +Y A V         L  ++ EL G Y+ +E  Y   +V KA+A  +P EV+  V   + V+D   +L+++  RA Q+     +LA+     E L    +PS  A     + DRS                   + G     F  AL   L+  E ++T +      M+ AINS   + A +  +   L E    GS            P ++E + +    +    G  + +   +  +  + + +  +    + +  + +D  ++E        P +   L +  +++K LR  + G+           V   L   +   ++ K+F EWG M+L + VR + +   +      +LL +F R+DQ+V L+N+   +DV
Sbjct:  218 LDVLAMYGNDARLLAWERKIGMNTGTVEADESLQMIDLLLDELATILQWGFQYSAAVVDVASHP-GLSTKIHELNGVYLLLEQFYIAQSVRKAVAIAEPEEVEPHVFEISTVQDTSFVLDKAFARANQSSHYHTVLAIVIAIVEALDGTFMPSILA-----LPDRSFELPLPVASPRATTEPAEMSTGDDEKSFGDAL---LEVVEMDLTAQLQRQAKMMMAINSAHKSSAYVDTLHARLEE----GSFPPY--------PPLLECLPKALSELQADVGQVITIGTQELYAIQLQAKLRGFFEASISQWQFELDLDSFEYFDV-HDSPLLR--LVHQVLREKALRRFRRGLNSVTFERLWRAVVTDLCQWIEDGIQTKQFNEWGAMQLDRDVRSVMQLCAKFPTEPISLLAEFTRLDQIVLLVNMVQASDV 624          
BLAST of EWM25826.1 vs. NCBI_GenBank
Match: gi|568025455|gb|ETL99468.1| (hypothetical protein L917_03680 [Phytophthora parasitica])

HSP 1 Score: 87.4261 bits (215), Expect = 4.008e-14
Identity = 110/459 (23.97%), Postives = 200/459 (43.57%), Query Frame = 0
Query:  296 ALKLLKWYSEDCSVREWQERCLSA---------RGTE---DLVVQELDFALDELQLVLGLSNRYLAFVAAPREECMD----LFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGVLVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDS------VPSFAAALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEA--MIYAINSMDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVLKQYGGYLEVLLDDFASRYVSSGILDYLSQVVGRT-----NYTIDATTYEKEAAGRGDPFVTQFLDYMFVKDKVLRDCKAGMTGSALLGFVERVAMSLSPALIQAL--EEKEFTEWGGMKLRQQVRLLQEQLMELVDGHGTLLPQ------FARVDQMVTLLNLDSPADV-HYLMMLKPDI 716
            AL++++ Y++D  +  W+ R  S           G E   D  +Q +D  LDEL  ++ +   Y AF+A   E          ++VQEL+G YV +E  Y   +V KA A  +P E+++GV VS++VEDV  +LN++  RA+Q ++    L++     + L          +PS    +  L    + TG +        FS  L Q +DE+      E   +I  INS   +   ++ +Q+ + E          S       P ++E +      + + +   +   + +  SR +       L QV+ R+      Y + +  Y+     +G P V + ++   + ++ L+  +  +   +    VE     L+  +  AL   +K   + G ++L ++V        +++    TL+PQ      F R+ Q+V +LNL  PA V  YL  L+ + 
Sbjct:  185 ALQMVQMYADDARMVAWERRANSQAQRDPRHVLEGDEVEADESLQMIDLFLDELAFIIRVLVSYTAFLATVCEGLGQKDGGFQVKVQELSGVYVVLERFYVFQSVHKATAIAEPQELEQGVYVSSVVEDVSFVLNKAFFRASQCMNYHTALSIVIAIVDALESQYLQAILVLPSRPCVI-PLSSINAATGQDGNNEQEVSFSDMLLQAVDEDLQRTLQEEARLIMTINSAYMSGEFVRALQEKIEEYS--------SSSFPNDAP-ILECLPTPINDMTEAFHSIVSNEIQEMLSRTLHKR----LPQVLSRSMDEQLQYVLTSAQYDA-LGSQGSPLV-RLVEREILTNRELQRYERALCRVSFEDLVEAATQYLTSCVENALLSSKKRCNDLGALQLEREV-------TDMLTRMSTLVPQRSLRGAFTRLFQVVFILNLMQPAHVLDYLASLREEF 620          
The following BLAST results are available for this feature:
BLAST of EWM25826.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107693|gb|EWM25826.1|0.000e+0100.00conserved oligomeric golgi complex subunit 4 isofo... [more]
gi|585107694|gb|EWM25827.1|0.000e+0100.00conserved oligomeric golgi complex subunit 4 isofo... [more]
gi|553195311|ref|XP_005856124.1|0.000e+0100.00component of oligomeric golgi complex 4 [Nannochlo... [more]
gi|299473571|emb|CBN77966.1|9.595e-2225.81conserved unknown protein [Ectocarpus siliculosus][more]
gi|695425505|ref|XP_009529194.1|7.125e-1724.57hypothetical protein PHYSODRAFT_315742 [Phytophtho... [more]
gi|301123221|ref|XP_002909337.1|2.579e-1524.00conserved hypothetical protein [Phytophthora infes... [more]
gi|566030163|gb|ETI53074.1|1.063e-1423.23hypothetical protein F443_03930 [Phytophthora para... [more]
gi|570993515|gb|ETP50855.1|2.575e-1423.64hypothetical protein F442_03921 [Phytophthora para... [more]
gi|813158614|ref|XP_012202437.1|3.240e-1422.97hypothetical protein SPRG_08079 [Saprolegnia paras... [more]
gi|568025455|gb|ETL99468.1|4.008e-1423.97hypothetical protein L917_03680 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4833rna4833Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications