EWM25873.1, cds4805 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|585107741|gb|EWM25873.1| (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana]) HSP 1 Score: 603.594 bits (1555), Expect = 0.000e+0 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
Query: 1 MGKNFMHLKYVLITIASQAGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLSPVFPPPHPHFPDASASGKVGIL 296
MGKNFMHLKYVLITIASQAGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLSPVFPPPHPHFPDASASGKVGIL
Sbjct: 1 MGKNFMHLKYVLITIASQAGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLSPVFPPPHPHFPDASASGKVGIL 296
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|553195223|ref|XP_005856104.1| (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526] >gi|422292939|gb|EKU20240.1| s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 407.142 bits (1045), Expect = 2.782e-141 Identity = 226/245 (92.24%), Postives = 229/245 (93.47%), Query Frame = 0
Query: 29 MSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEG-----VMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEE 268
MSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQE V ++G +IPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEE
Sbjct: 1 MSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEDLAQIQVFTNFRGNFCLCIPQIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEE 245
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|299115499|emb|CBN75663.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 321.242 bits (822), Expect = 4.363e-107 Identity = 159/255 (62.35%), Postives = 187/255 (73.33%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLL 273
AGG AGTAVD++L+PLDTIKTRLQ+ EGF K+GG RGVY GL AAA GSAPGAALFFS YE K +P +PL HM AASV ET ACL+RVPTENVKQ +QAG + T E + I K G+MGFY G+L+TV REIPFSF+QFP+YE KA WA+ +G P+ P +AA CGSV+GA AAAVTTP+DV+KTRL+L D G Y G+ D FRRV EEG L +GV PRV WI IGGFV+FG YE + L
Sbjct: 13 AGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPD-----SPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWL 262
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|698779643|ref|XP_009822865.1| (hypothetical protein H257_01389, partial [Aphanomyces astaci] >gi|574122526|gb|ETV88002.1| hypothetical protein H257_01389, partial [Aphanomyces astaci]) HSP 1 Score: 294.664 bits (753), Expect = 1.464e-96 Identity = 156/259 (60.23%), Postives = 200/259 (77.22%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKI---EAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLS 274
AGG AGT VD++L+PLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGAALFFS YET K + +P ++D +P++HM +A++GET CL+RVPTE VKQNLQ G + + E++R+I+ G+ GFY+G+ S + REIPFSF+QFP++E K+ W+Q QG VSP+Q A CG+++G AA++TTPLDVIKTRL+L KD QG +Y G+ D F RV +EG TLF+GV PR MWITIGGFV+FG YE LS
Sbjct: 20 AGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSSYETTKAFLQKQQPHLAD--SPVIHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTNGIAGFYRGYWSLLAREIPFSFIQFPLWEGMKSTWSQRQGEAVSPVQGAVCGALSGGFAASITTPLDVIKTRLMLGKDAQGVEYIGMRDAFTRVYTQEGWQTLFSGVKPRTMWITIGGFVFFGVYEHASATLS 276
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|1183494047|gb|ORZ17713.1| (mitochondrial carrier domain-containing protein [Absidia repens]) HSP 1 Score: 292.738 bits (748), Expect = 1.489e-95 Identity = 139/251 (55.38%), Postives = 177/251 (70.52%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLIL-EKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEE 268
AGG AGTAVD +LFPLDTIKTRLQ+ GF +GG RGVY GL AA GSAP A+LFF YE K + PL+HMVAAS GE AC +RVPTE VKQ +Q ++NT + A+ + + EG++G Y+GFLSTV REIPF+ +QFP+YE K +A GRP P QAA CGS+AG +AAA+TTPLDV KTR++L K+ ++Y GI+ +R+ AEEGP L +G+ PRVMWI+IGG ++ G YE+
Sbjct: 26 AGGMAGTAVDTALFPLDTIKTRLQSQAGFMASGGLRGVYSGLLAAVIGSAPSASLFFVTYEATKHVLGTSIDPAYTPLIHMVAASCGEVTACSVRVPTEVVKQRMQTKQFNTASSAVSNVIRTEGILGLYRGFLSTVAREIPFTCIQFPLYEYFKRVYASHYGRPAEPYQAALCGSLAGGIAAAITTPLDVCKTRIMLSSKNQSTKQYTGILSTMKRIAAEEGPRALLSGLGPRVMWISIGGSIFLGVYEK 276
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|1173947512|gb|OQR95780.1| (S-adenosylmethionine mitochondrial carrier protein [Thraustotheca clavata]) HSP 1 Score: 291.967 bits (746), Expect = 1.523e-95 Identity = 153/257 (59.53%), Postives = 196/257 (76.26%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIK-IEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLS 274
AGG AGT+VD++LFPLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGAALFFS YET K + L +PL+HM AA+ GET ACL+RVPTE VKQN+Q G + +++T++ G+ GFY+G+ S + REIPFSF+QFP++E KA W++++G VSP Q A CGS++G +AA++TTPLDV+KTRL+L KD G +Y G+ D F RV +EG TLF+G+ PR MWI+IGGFV+FGAYE LS
Sbjct: 16 AGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSNSPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESASAFLS 272
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|673032348|ref|XP_008870135.1| (hypothetical protein H310_06745 [Aphanomyces invadans] >gi|574474135|gb|ETW01137.1| hypothetical protein H310_06745 [Aphanomyces invadans]) HSP 1 Score: 290.812 bits (743), Expect = 4.443e-95 Identity = 157/258 (60.85%), Postives = 195/258 (75.58%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIK---IEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLL 273
AGG AGT VD++L+PLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGAALFFS YET K + +P ++D +P+VHM +A++GET CL+RVPTE VKQNLQ G + + E++R+I+ GV GFY+G+ S + REIPFSF+QFP++E K W QG VSP+Q A CGS++G AA VTTPLDVIKTRL+L KD QG +Y G+ D F RV +EG TLF+GV PR WITIGGFV+FG YE+ L
Sbjct: 18 AGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLAD--SPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|1173948995|gb|OQR97073.1| (S-adenosylmethionine mitochondrial carrier protein [Achlya hypogyna]) HSP 1 Score: 289.656 bits (740), Expect = 1.251e-94 Identity = 159/258 (61.63%), Postives = 196/258 (75.97%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLA--PLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLLS 274
AGG AGT+VD++LFPLDTIKTRLQ+S+GF KAGGF+GVYKGL AAAAGSAPGAALFFS YE K EA +A PL+HM AA+ GET ACL+RVPTE VKQN+Q G N +++T++ G+ GFY+G+ S + REIPFSF+QFP++E KA W+ +QG VS LQ A CGS++G +AA++TTPLDV+KTRL+L KD QG +Y G+ D F RV EEG LF+GV PR MWI+IGGFV+FGAYE V LS
Sbjct: 17 AGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYEMSK-EALQTQLPHMASSPLIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSVKTLYATNGLSGFYRGYWSMLAREIPFSFIQFPLWEGLKASWSAKQGEQVSALQGALCGSISGGIAASITTPLDVVKTRLMLGKDAQGVEYRGMKDTFVRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETVSATLS 273
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|1021056841|emb|SAM07313.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 289.271 bits (739), Expect = 3.877e-94 Identity = 137/251 (54.58%), Postives = 176/251 (70.12%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQG-RKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEE 268
AG AGTAVD +LFPLDTIKTRLQ+ GF +GG RGVY GL AA GSAP A+LFF YE K + AP +HM+AAS GE AC +RVPTE VKQ +Q ++NT + A+ + + EGV+G Y+GFLSTV REIPF+ +QFP+YE K + ++ GRP P QAA CGS+AG +AAA+TTPLDV KTR++L Q ++Y GI+ +R+ AEEGP L +G+ PRVMWI+IGG ++ G YE+
Sbjct: 26 AGALAGTAVDTALFPLDTIKTRLQSQAGFMASGGLRGVYSGLLAAVIGSAPSASLFFVTYEAAKRALGTSIDPAYAPFIHMMAASCGEVTACSVRVPTEVVKQRMQTKQFNTASSAVSNVIRTEGVLGLYRGFLSTVAREIPFTCIQFPLYEYFKRTYNKQYGRPAEPYQAALCGSLAGGIAAAITTPLDVCKTRIMLSNKNQSVKQYTGIISTMKRIAAEEGPRALLSGIGPRVMWISIGGSIFLGVYEK 276
BLAST of EWM25873.1 vs. NCBI_GenBank
Match: gi|1026953639|ref|XP_016612058.1| (hypothetical protein SPPG_01466 [Spizellomyces punctatus DAOM BR117] >gi|907098645|gb|KND04019.1| hypothetical protein SPPG_01466 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 286.574 bits (732), Expect = 1.869e-93 Identity = 147/256 (57.42%), Postives = 181/256 (70.70%), Query Frame = 0
Query: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIE-AEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLL 273
AGG AGTAVD++LFPLDTIKTRLQ GFW +GGF GVY GL + GSAPGAA FF YE +K + A L PLVHM+AAS GE AC IRVPTE VKQ +Q G+Y + + AL +I K G+ GFY+G+ TVFREIPF+ +QFP+YE K WA +GRPV P +AA GSVAG +AAA+TTPLDV+KTR++L G GI++ FR +VA+EG TLF+GV PRV+WI+IGG ++ G YE LL
Sbjct: 7 AGGLAGTAVDVALFPLDTIKTRLQTKGGFWASGGFSGVYSGLSSVVIGSAPGAAAFFVTYEYLKRKLASALPGRNREPLVHMIAASGGEVAACFIRVPTEVVKQRMQTGQYRSVSLALTSIMKLNGIRGFYQGYSMTVFREIPFTCIQFPLYERFKKIWADWEGRPVYPWEAALFGSVAGGIAAALTTPLDVVKTRIMLSTKRGGAV--GILETFRAIVAKEGARTLFSGVGPRVIWISIGGSIFLGVYEAAMNLL 260 The following BLAST results are available for this feature:
BLAST of EWM25873.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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