EWM25866.1, cds4799 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|585107734|gb|EWM25866.1| (ferredoxin [Nannochloropsis gaditana]) HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MLGNEMEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGTGRKRVDL 280
MLGNEMEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGTGRKRVDL
Sbjct: 1 MLGNEMEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGTGRKRVDL 280
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|553195329|ref|XP_005856128.1| (ferredoxin [Nannochloropsis gaditana CCMP526] >gi|422292963|gb|EKU20264.1| ferredoxin [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query: 6 MEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGTGRKRVDL 280
MEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGTGRKRVDL
Sbjct: 1 MEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGTGRKRVDL 275
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|1210513950|dbj|GAX27249.1| (ferredoxin [Fistulifera solaris]) HSP 1 Score: 208.379 bits (529), Expect = 1.198e-61 Identity = 102/177 (57.63%), Postives = 123/177 (69.49%), Query Frame = 0
Query: 89 LQETPSHQFVDRDEE-GTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGS----DGLLSSSGGDQGM---QEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRR 257
L SH V+ D+E G + + VYVDE+TCIGCTNCAM A +TFYM+ EHGRARVFQQW D TIQ AIETCPVDCIHYVP+EEL +LE ER M IN+KARLV + L GG Q+ISGN RC NCPSRGC NCPMFGVG+NPEY+++++ ++ R+R
Sbjct: 185 LATVESHTRVEIDDETGEPVRLQMVYVDEHTCIGCTNCAMIAQSTFYMNPEHGRARVFQQWGDDDETIQIAIETCPVDCIHYVPYEELVKLEIERRDMNINFKARLVSQAENGNSLSHRVGGANRFTAPQKISGNSAPRCNNCPSRGCKNCPMFGVGKNPEYEKREKARKERLARKR 361
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|1210513312|dbj|GAX27709.1| (ferredoxin [Fistulifera solaris]) HSP 1 Score: 208.379 bits (529), Expect = 1.260e-61 Identity = 103/177 (58.19%), Postives = 123/177 (69.49%), Query Frame = 0
Query: 89 LQETPSHQFVDRDEE-GTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGS----DGLLSSSGGDQ---GMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRR 257
L SH V+ DEE G + + VYVDE+TCIGCTNCAM A +TFYM+ EHGRARVFQQW D TIQ AIETCPVDCIHYVP+EEL +LE ER M IN+KARLV + L GG Q+ISGN RC NCPSRGC NCPMFGVG+NPEY+++++ ++ R+R
Sbjct: 195 LATVESHTRVEIDEETGEPVRLQMVYVDEHTCIGCTNCAMIAQSTFYMNPEHGRARVFQQWGDDDETIQIAIETCPVDCIHYVPYEELVKLEIERRDMNINFKARLVSQAENGNSLSHRVGGANRFTAPQKISGNSAPRCNNCPSRGCKNCPMFGVGKNPEYEKREKARKERLARKR 371
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|298714578|emb|CBJ27569.1| (ferredoxin (cyanobacterial type ferredoxin family) [Ectocarpus siliculosus]) HSP 1 Score: 211.46 bits (537), Expect = 1.407e-61 Identity = 100/177 (56.50%), Postives = 126/177 (71.19%), Query Frame = 0
Query: 89 LQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEY-QRKQRQIAQKRERRRASKDNSS 264
L+ PS V +DE G + RFVYVDEYTCIGCT+C AP+TF+M++E GRARV+QQ +D +QTAI TCPVDCIHYV F EL RLEKER G++IN+KA+LVG+D GMQ ISG+ RC NCPS+GC+NCPMF VG NPEY +RK+ + A++ RR+ K+ S
Sbjct: 322 LKVAPSSSLVKKDENGVPLEDRFVYVDEYTCIGCTHCNHQAPSTFFMEEEFGRARVYQQGRDTADAVQTAILTCPVDCIHYVDFPELVRLEKEREGISINFKAKLVGND----HDNVANGMQRISGDGGMRCDNCPSKGCYNCPMFSVGNNPEYTKRKEERKAKRIARRKKEKEELS 494
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|397620706|gb|EJK65860.1| (hypothetical protein THAOC_13242 [Thalassiosira oceanica]) HSP 1 Score: 199.519 bits (506), Expect = 2.318e-58 Identity = 119/295 (40.34%), Postives = 163/295 (55.25%), Query Frame = 0
Query: 1 MLGNEMEGVKDKSGEEDGTGFSVVRKRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVE------------------LETGFTPKLQE------TPSHQFVDRDEEGTLKQARF--VYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLV---------GSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASK 260
++ E++ V D+ G E+ V+AG I ++++ + ++ +A++A +M G SA +S+ GI E +TGF +L E SH V+ DE+ T + R VYVDE +CIGCTNCA A +TF+M+ EHGRARVFQQW D T+Q AI+TCPV+CIHYVP++EL+ LE ER G IN KARLV G +G G Q+ISGN RC NCP RGC NCPMFGVG+NPE+Q+++ +K +R K
Sbjct: 73 IVETEVQNVADEDGGEEAW-------LDVLAG------ISADEVSFMAKEAERADKARQMNELGYSAESISSTLGIATDEGMEIDQDNEVFQAFKEETAKTGFGLQLDEEVDMELVESHTTVEWDED-TDEPVRLQMVYVDEVSCIGCTNCACIAQSTFFMEGEHGRARVFQQWGDDDETVQVAIDTCPVNCIHYVPYDELKSLEIERRGQNINNKARLVSQAENASGIGPQATYGGAGAFTGQQKISGNMGSRCNNCPGRGCANCPMFGVGKNPEFQKREAARKEKIAQREMQK 353
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|1189384477|gb|OSX71709.1| (hypothetical protein BU14_0507s0007 [Porphyra umbilicalis]) HSP 1 Score: 162.155 bits (409), Expect = 2.856e-46 Identity = 84/166 (50.60%), Postives = 108/166 (65.06%), Query Frame = 0
Query: 110 RFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQE--ISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSEGGSGSGGT 273
RFVYVDE CIGCT+CA TA +TF++DDE GRAR F+Q D P T+ AI+TCPV+CI+YV F++L LE+ER G IN ARLVG DG+ S G +G E + RC +CP RGC CP++GVG NPEY RK + R R+A++ +E G G +
Sbjct: 7 RFVYVDEVDCIGCTHCAATARHTFFIDDEWGRARAFRQDGDDPETVAEAIDTCPVNCIYYVSFDDLVTLEREREGQIINNAARLVGGDGV---SEGPRGTSEADVMRTGGIRCEDCPGRGCAECPLYGVGRNPEYLRK----VEARASRQAARTRRNEEGGERGAS 165
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|676398131|ref|XP_009042343.1| (hypothetical protein AURANDRAFT_72808, partial [Aureococcus anophagefferens] >gi|323446977|gb|EGB02960.1| hypothetical protein AURANDRAFT_72808, partial [Aureococcus anophagefferens]) HSP 1 Score: 161.77 bits (408), Expect = 2.558e-41 Identity = 78/154 (50.65%), Postives = 101/154 (65.58%), Query Frame = 0
Query: 94 SHQFVDRDEEG------TLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTI--NYKARLVGSDGL-LSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGE 238
SH+ +D DE+G + VYVDE TC+GCT CA AP TF M D+HGRAR F Q D TI+ AI TCPV CIHYVP++EL LE+ R + + N+K RLVG++GL +++ G + +QEIS N RC NCP+ C +CPMFGVG+
Sbjct: 545 SHELIDEDEDGDPVSLCSSFTYTAVYVDEATCVGCTMCATIAPQTFLMTDDHGRARSFNQEGDDEETIREAISTCPVSCIHYVPWDELVALERNREAVMLSYNFKGRLVGNEGLGIAADGAGEALQEISTNSALRCNNCPTNECRDCPMFGVGD 698
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|546314031|ref|XP_005715466.1| (unnamed protein product [Chondrus crispus] >gi|507111944|emb|CDF35647.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 144.05 bits (362), Expect = 1.361e-37 Identity = 80/187 (42.78%), Postives = 112/187 (59.89%), Query Frame = 0
Query: 77 KLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLV-GSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDN 262
++ + +T + L S + V+ DE+G + R+VYV+E CIGCT+CA TA TF+M+ E GRARVF Q D ++ AI TCPV+CI+YV + +L LE R IN ARLV GSD S G + SG RC +CP RGC CP+FGVGENPEY + ++ R+ ++ +K++
Sbjct: 116 EITQADTTLSNPLGLKKSFEIVELDEDGMGPRDRYVYVEERDCIGCTHCATTATGTFFMESEWGRARVFNQSGDTEGDVEVAIGTCPVNCIYYVDWNDLVALENMRDDQVINNTARLVGGSDPSGSRKGTTKTKVMDSGI--MRCEDCPGRGCPQCPLFGVGENPEYLKMKKM----RDAKKTAKND 296
BLAST of EWM25866.1 vs. NCBI_GenBank
Match: gi|922869770|gb|KOO35815.1| (ferredoxin [Chrysochromulina sp. CCMP291]) HSP 1 Score: 142.124 bits (357), Expect = 6.901e-37 Identity = 81/181 (44.75%), Postives = 107/181 (59.12%), Query Frame = 0
Query: 92 TPSHQFVDRDEEGTLKQA--RFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAG----MTI-NYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEYQRKQRQIAQKRERRRASKDNSSE 265
PSH ++ DEE T K R YVDE TCIGC NCA A NTF+M+D+ G+ARV+QQ D I AI+TCPV+CIHYV E+L LE+ER +TI NY + G + + + + RC NCPSRGC CPMFGVG+NP Y + + ++R +R AS + ++E
Sbjct: 29 VPSHMRLELDEE-TKKPVLPRMTYVDEQTCIGCKNCACVAKNTFFMEDDFGKARVYQQGGDTVEDIAIAIDTCPVNCIHYVSHEDLVILEQERMAREGDVTINNYGSFKQAWTGGALAVPKTKALFYNNPAMGMRCNNCPSRGCRECPMFGVGQNPIYLER---LEERRLKREASGEAAAE 205 The following BLAST results are available for this feature:
BLAST of EWM25866.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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