EWM25879.1, cds4793 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25879.1 vs. NCBI_GenBank
Match: gi|553195208|ref|XP_005856101.1| (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|422292936|gb|EKU20237.1| hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|585107747|gb|EWM25879.1| hypothetical protein Naga_100054g15 [Nannochloropsis gaditana]) HSP 1 Score: 2024.98 bits (5245), Expect = 0.000e+0 Identity = 985/985 (100.00%), Postives = 985/985 (100.00%), Query Frame = 0 Query: 1 MARLCSTSVSAVLLLLVSNSGWTAGKTELRQTFSGLAQAAESNPGNQFGGAFLNGASAIAKGLAGNAATDNIPSSTSAGATDIIKDDLGPDVLPTPPENNNVANKASLGGLVGGPGTSLGDGLSWNFGSKGMIQMLTGFFMTFMSGSANPNSALNVYGSALMSQDPVEISAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPASDSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIKNENLTFPEPRLPRPAFQGLWTSLAGNDLLGVESIPQASVTMAALQGSDVYVNGKLAGRATDNVKVVSKQTASFGWSPIQSVYYDPENPVTANPVIREYMDADGNPVQLELVPTPAKFLPDEVLFAVKVPITGGLKAFFATHDVCGTSRSSAAGWKCIATTFPDANWTLPSFDDSKWLPAKALKKGEACSGMPTDCTALPPDAQGIWADTCTGSGGPNQGNVYCRLRVPQTCDLTARAGSDDRVKTWCPDLANAVATARFASPTLHWLYANGLEVGGDQTMVIPAGTTSFALDPAAPTVVLAFKAVDDTRKVVKSFIKGQFNLCGFEHVTDASWRCAPSEPFTDDWLQPGFDDSEWDPVRVVDGFPWQPNPSAGMSPESSWVWAQSGIQTFCRLEVPNPVYGAKQFFEIA 985 MARLCSTSVSAVLLLLVSNSGWTAGKTELRQTFSGLAQAAESNPGNQFGGAFLNGASAIAKGLAGNAATDNIPSSTSAGATDIIKDDLGPDVLPTPPENNNVANKASLGGLVGGPGTSLGDGLSWNFGSKGMIQMLTGFFMTFMSGSANPNSALNVYGSALMSQDPVEISAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPASDSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIKNENLTFPEPRLPRPAFQGLWTSLAGNDLLGVESIPQASVTMAALQGSDVYVNGKLAGRATDNVKVVSKQTASFGWSPIQSVYYDPENPVTANPVIREYMDADGNPVQLELVPTPAKFLPDEVLFAVKVPITGGLKAFFATHDVCGTSRSSAAGWKCIATTFPDANWTLPSFDDSKWLPAKALKKGEACSGMPTDCTALPPDAQGIWADTCTGSGGPNQGNVYCRLRVPQTCDLTARAGSDDRVKTWCPDLANAVATARFASPTLHWLYANGLEVGGDQTMVIPAGTTSFALDPAAPTVVLAFKAVDDTRKVVKSFIKGQFNLCGFEHVTDASWRCAPSEPFTDDWLQPGFDDSEWDPVRVVDGFPWQPNPSAGMSPESSWVWAQSGIQTFCRLEVPNPVYGAKQFFEIA Sbjct: 1 MARLCSTSVSAVLLLLVSNSGWTAGKTELRQTFSGLAQAAESNPGNQFGGAFLNGASAIAKGLAGNAATDNIPSSTSAGATDIIKDDLGPDVLPTPPENNNVANKASLGGLVGGPGTSLGDGLSWNFGSKGMIQMLTGFFMTFMSGSANPNSALNVYGSALMSQDPVEISAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPASDSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIKNENLTFPEPRLPRPAFQGLWTSLAGNDLLGVESIPQASVTMAALQGSDVYVNGKLAGRATDNVKVVSKQTASFGWSPIQSVYYDPENPVTANPVIREYMDADGNPVQLELVPTPAKFLPDEVLFAVKVPITGGLKAFFATHDVCGTSRSSAAGWKCIATTFPDANWTLPSFDDSKWLPAKALKKGEACSGMPTDCTALPPDAQGIWADTCTGSGGPNQGNVYCRLRVPQTCDLTARAGSDDRVKTWCPDLANAVATARFASPTLHWLYANGLEVGGDQTMVIPAGTTSFALDPAAPTVVLAFKAVDDTRKVVKSFIKGQFNLCGFEHVTDASWRCAPSEPFTDDWLQPGFDDSEWDPVRVVDGFPWQPNPSAGMSPESSWVWAQSGIQTFCRLEVPNPVYGAKQFFEIA 985
BLAST of EWM25879.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 145.206 bits (365), Expect = 2.273e-33 Identity = 123/463 (26.57%), Postives = 204/463 (44.06%), Query Frame = 0 Query: 170 SAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKA--TVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNT-GASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGI---KSDGWGGVPPPALRVKAF--SVLATGLWFNLAPCNPKNDITIENFIE------NRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPA---------------SDSRYASISLVNLYPPGRNVYSVSDQSLRNFY---------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYE--------QSLEQVRYACEA----EKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIKNENLTF 582 S A L S++ +CA+Q S G ++ F DG H+ FVP + V +G++P R FSY +Y + + V + D ++ + G NPF A PG T G G Y ++VT +G QG+PNE+ T A G + +G ++ RV D K+D WG V PP ++ K F S GLW+ L C P N FI +R+ E + C +N + F+ Q +++ +I+GTLPP+ S++RY S+S +L PG + ++ D + +FY W+ +++ Y I+ A + + +CG A ++ + + SYP +V RE+++ QS+ ++ ACE+ C F M ++YP+++Y C G + A N++ T+ Sbjct: 30 SYALAGLNASIEFNCAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYD--PKSLDPVASVRDYEIKSVRGVNPF-ATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASG---SNATGAFVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKIASQFISTIATGYSRVLATENKAGAN-PCPTWNSRDQFLDGGGVQ----------------------GNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNL-RNSRQYKIVAAADLASAKRCGHLTRDA----MFLSTWGQTARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAPYNQSATY 457
BLAST of EWM25879.1 vs. NCBI_GenBank
Match: gi|585108896|gb|EWM26805.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 107.071 bits (266), Expect = 7.099e-20 Identity = 110/467 (23.55%), Postives = 198/467 (42.40%), Query Frame = 0 Query: 179 SLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPT-TKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGI------KSDGWGGVPPPALRVKAFSVLATGLW------FNLAPCNPKNDIT--IENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQY------FKTPDENHIISCGN-RALLPPGADMITIISGTLP--PAS-------------DSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAV-------NYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPG----------IVYREMM------------------TDGYEQSLEQVR-YACEAEKDC--SNPKFFEQQMGDYYPRISYLSCSSSGL 570 +++ CA+ ++ ++ F D + H+ P + + +GEFP SR FS TY ++ S + + D+++V S G N F G + + ++ DG +GFPNE+ G+ ++ +G +++ R+ D + K WG PP + ++ L W L P IT + + +RL ++ + V C + N+ + F+ + F D ++++C N R D+I +++ LP P S D RYAS+S+ +L PPG + + D +R+FY+D + + N ++++A N+ AL++C + + + D LE G IVYRE++ D Y+ S++ R C D NP M ++YPR+S+ +CS SG+ Sbjct: 217 AIETDCAWTASADYQTANLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTY---DENFSPIAGLKDLEVVPSEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNELPINV-GNFSSTTTGYVMM-RMYGVDPLAKTNANKLAKWGYKDPPTISLRTAGSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRL-IQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTPYSKFKARFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKVDTSESLILTL------DDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGENGDTCDRNPYRAASIMKEHYPRVSWYTCSPSGV 671
BLAST of EWM25879.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 93.5893 bits (231), Expect = 4.875e-16 Identity = 66/187 (35.29%), Postives = 97/187 (51.87%), Query Frame = 0 Query: 170 SAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKA--TVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNT-GASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGI---KSDGWGGVPPPALRVKAF--SVLATGLWFNL 348 S A L S++ +CA+Q S G ++ F DG H+ FVP + V +G++P R FSY +Y + + V + D ++ + G NPF A PG T G G Y ++VT +G QG+PNE+ T A G + +G ++ RV D K+D WG V PP ++ K F S GLW+ L Sbjct: 176 SYALAGLNASIEFNCAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYD--PKSLDPVASVRDYEIKSVRGVNPF-ATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASG---SNATGAFVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTL 355
BLAST of EWM25879.1 vs. NCBI_GenBank
Match: gi|585112016|gb|EWM29475.1| (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 92.0485 bits (227), Expect = 7.866e-16 Identity = 94/395 (23.80%), Postives = 165/395 (41.77%), Query Frame = 0 Query: 218 VFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADG-------------DVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIIS---CGNRALLPP-----GADMITIISGTLPPAS----------------DSRYASISLVNLYPPGRNVYSVSDQSLRNFY---WDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGY-------EQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSC 565 V+ FP+ FSY TY++ ++ + D+ + S G NP+ GA G+Y++YVT DG +G+PNE++ ++ D + LS +++ R+ + S WGGV P + +++ W L PC +D T F NR + G + +++ +Q+++ H++S + AL P G + + +I GT P + +RY S + +++ PG S++ Q + NFY WD+ Y I+ A + + CGL P + Y + + P ++ REM+ +QS+E V C E C + F + +GD YP + +C Sbjct: 54 VYKISASFPRVVYFSYETYSLRGHPLT---SLPDLRIDPSWGKNPYREETTEEGA-GTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLS--VVMLRLYTTEQPPS-VWGGVDRPVI---SYTDDLGQTWKELQPC---SDTTRYQF--NRAMRQIGWTVYDFRYLIYH----------SQWYRL-RSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDR-----RYKIVGATSIDIVKACGLDD-PHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTC 416
BLAST of EWM25879.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 78.5666 bits (192), Expect = 3.028e-11 Identity = 90/414 (21.74%), Postives = 158/414 (38.16%), Query Frame = 0 Query: 212 PTTKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMAD-------GIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENR---------LALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPA---------------SDSRYASISLVNLYPPGRNVYSVSDQSLRNFY--------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSL-------EQVRYACEA---EKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIK 576 P + V+ +G+FP R FS+ Y + Q +S + D D+ S+G NPF G+Y++YV+ DG +G+PNE+ D T+ + ++ +R+ + D K+ WG V P + + G W + C+ + E IEN L+ G E +F+ + N + + +EN+I C + + D I I+G LP DSRY S + + P + ++ D+ + N Y WD+ Y ++ + KCGL + P IV R ++ G ++ +R CE+ + C + + + ++YP + +C L PA + Sbjct: 152 PHKEEEVYRIRGKFPYVRYFSFTVYDASLQSIS---TLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALR-PDSTSPYA--LLAFRLQLLDPRAGEDRSGKNREWGYVDMPLVEILNHR---NGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQNPIIRRGVA-VRNANENYIFWCMPKEI--GKKDYIIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRM-----YNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLLPGGGKERRGTEGVANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCDYQNLKPARLH 548 The following BLAST results are available for this feature:
BLAST of EWM25879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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