EWM25876.1, cds4787 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|585107744|gb|EWM25876.1| (atp dependent rna helicase [Nannochloropsis gaditana]) HSP 1 Score: 1313.9 bits (3399), Expect = 0.000e+0 Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0
Query: 1 MQHAGNKQSQDLVRVLLMQHGGKYVPPALRGESGAENDETPPTSLTEVKAGGMDHSESSSANNHEPSEAIHPTSGAHQRHQQMPPYPQNTPPSGPMGDYRGSSYGGGGGGYGNQGGGYGYGGRGGGGRFDGGGGGYGRGGGAYRGGNGRGYGGGGRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYSGGGGGGGRRPRGGGRGGARFGARDFRKDRGGGDGYDRGRGGGYGGGYGGG 650
MQHAGNKQSQDLVRVLLMQHGGKYVPPALRGESGAENDETPPTSLTEVKAGGMDHSESSSANNHEPSEAIHPTSGAHQRHQQMPPYPQNTPPSGPMGDYRGSSYGGGGGGYGNQGGGYGYGGRGGGGRFDGGGGGYGRGGGAYRGGNGRGYGGGGRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYSGGGGGGGRRPRGGGRGGARFGARDFRKDRGGGDGYDRGRGGGYGGGYGGG
Sbjct: 1 MQHAGNKQSQDLVRVLLMQHGGKYVPPALRGESGAENDETPPTSLTEVKAGGMDHSESSSANNHEPSEAIHPTSGAHQRHQQMPPYPQNTPPSGPMGDYRGSSYGGGGGGYGNQGGGYGYGGRGGGGRFDGGGGGYGRGGGAYRGGNGRGYGGGGRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYSGGGGGGGRRPRGGGRGGARFGARDFRKDRGGGDGYDRGRGGGYGGGYGGG 650
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|695381073|ref|XP_009516981.1| (hypothetical protein PHYSODRAFT_323195 [Phytophthora sojae] >gi|348689892|gb|EGZ29706.1| hypothetical protein PHYSODRAFT_323195 [Phytophthora sojae]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 325/445 (73.03%), Postives = 380/445 (85.39%), Query Frame = 0
Query: 154 GGRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA 598
RVN G+HGDLRP++RLE +LF A+++GINFDKYDDIPVETSGE P+P++ F+ +GP+++ NL LC YSKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P ALVL+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L++ENG +IP FL+ MA
Sbjct: 100 AARVNEVGYHGDLRPNERLERELF--GDAKSSGINFDKYDDIPVETSGENVPDPVSEFSATELGPEVIRNLELCKYSKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPEVGHGRSRKIFPSALVLSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLACIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGNALSMMNEKNRNIAREMYELMAENGQEIPAFLDQMA 541
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|567948431|gb|ETK74179.1| (hypothetical protein L915_18980 [Phytophthora parasitica] >gi|567977098|gb|ETL27609.1| hypothetical protein L916_18878 [Phytophthora parasitica] >gi|570938451|gb|ETP03708.1| hypothetical protein F441_19382 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 338/475 (71.16%), Postives = 396/475 (83.37%), Query Frame = 0
Query: 155 GRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA-YSGGGGGGGRRPRGGGRGGARFGARDFRKD 628
RVN G+HGDLR ++RLE +LF A+++GINFDKYDDIPVETSGE PEP+ F+E+ +GP+++ NL LC Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L+SENG +IP FL+ MA GGG R GGR +RFGARD+R +
Sbjct: 111 ARVNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANSGYRGGGRSGRGGRGGRSSSRFGARDYRNE 582
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|675177173|ref|XP_008897471.1| (hypothetical protein PPTG_05621 [Phytophthora parasitica INRA-310] >gi|568006590|gb|ETL80844.1| hypothetical protein L917_18705 [Phytophthora parasitica] >gi|568103304|gb|ETN17975.1| hypothetical protein PPTG_05621 [Phytophthora parasitica INRA-310]) HSP 1 Score: 674.47 bits (1739), Expect = 0.000e+0 Identity = 338/475 (71.16%), Postives = 396/475 (83.37%), Query Frame = 0
Query: 155 GRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA-YSGGGGGGGRRPRGGGRGGARFGARDFRKD 628
RVN G+HGDLR ++RLE +LF A+++GINFDKYDDIPVETSGE PEP+ F+E+ +GP+++ NL LC Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L+SENG +IP FL+ MA GGG R GGR +RFGARD+R +
Sbjct: 111 ARVNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANSGYRGGGRSGRGGRGGRSSSRFGARDYRNE 582
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|566010898|gb|ETI33809.1| (hypothetical protein F443_19561 [Phytophthora parasitica P1569] >gi|568036438|gb|ETM34048.1| hypothetical protein L914_18795 [Phytophthora parasitica] >gi|570968738|gb|ETP31857.1| hypothetical protein F442_19333 [Phytophthora parasitica P10297]) HSP 1 Score: 674.47 bits (1739), Expect = 0.000e+0 Identity = 338/475 (71.16%), Postives = 396/475 (83.37%), Query Frame = 0
Query: 155 GRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA-YSGGGGGGGRRPRGGGRGGARFGARDFRKD 628
RVN G+HGDLR ++RLE +LF A+++GINFDKYDDIPVETSGE PEP+ F+E+ +GP+++ NL LC Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L+SENG +IP FL+ MA GGG R GGR +RFGARD+R +
Sbjct: 111 ARVNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANSGYRGGGRSGRGGRGGRSSSRFGARDYRNE 582
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|570314687|gb|ETO62635.1| (hypothetical protein F444_19513 [Phytophthora parasitica P1976]) HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0 Identity = 337/475 (70.95%), Postives = 395/475 (83.16%), Query Frame = 0
Query: 155 GRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA-YSGGGGGGGRRPRGGGRGGARFGARDFRKD 628
RVN G+HGDLR ++RLE +LF A+++GINFDKYDDIPVETSGE PEP+ F+E+ +GP+++ NL LC Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCY TG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L+SENG +IP FL+ MA GGG R GGR +RFGARD+R +
Sbjct: 111 ARVNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYSTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANSGYRGGGRSGRGGRGGRSSSRFGARDYRNE 582
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|953490579|emb|CEG46233.1| (dead deah box rna [Plasmopara halstedii]) HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0 Identity = 339/521 (65.07%), Postives = 398/521 (76.39%), Query Frame = 0
Query: 106 GGGGGYGNQGGGY-GYGGRGGGGRFDGGGGGYGRGGGAYRGGNGR----------GYGGGGR-----------------VNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA 598
GG GY + G GYG R G RG G R N R GY R VN G+HGD+R ++RLE +LF A+++GINFDKYDDIPVETSGE P+P+ F+E+ +GP+++ NL LC Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L++ENG +IP FL+ MA
Sbjct: 38 GGNSGYDRRSGSREGYGTRSGSNE---------RGDGPPRATNSRWSGFEVDRRGGYNDDRRSGYGGGYGRGGGAGIARVNELGYHGDVRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPDPVNDFSEEQLGPEVIRNLELCKYAKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRTRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMAENGQEIPAFLDQMA 546
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|301120023|ref|XP_002907739.1| (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >gi|262106251|gb|EEY64303.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 321/444 (72.30%), Postives = 377/444 (84.91%), Query Frame = 0
Query: 155 GRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA 598
RVN G+HGD+R ++RLE +LF A+++GINFDKYDDIPVETSGE P+P+ F E+ +GP+++ NL LC YSKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFP +IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L++ENG +IP FL+ MA
Sbjct: 112 ARVNELGYHGDVRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPDPVTEFAEEQLGPEVIRNLELCKYSKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPCEIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMAENGQEIPAFLDQMA 552
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|970664483|gb|KUG01383.1| (ATP-dependent RNA helicase ded1 [Phytophthora nicotianae]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 343/492 (69.72%), Postives = 401/492 (81.50%), Query Frame = 0
Query: 138 RGGGAYRGGNGRGYGGGGRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMA-YSGGGGGGGRRPRGGGRGGARFGARDFRKD 628
RGGGA RVN G+HGDLR ++RLE +LF A+++GINFDKYDDIPVETSGE PEP+ F+E+ +GP+++ NL LC Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G PP G RK++P L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV QLRELERGCDLLVATPGRLVDL+ER RISL IRFLILDEADRMLDMGFEPQIRRIVEQE MP +RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK YLV FL+Q D GLIL+FVE KR AD+LE +L ++GFP SIHGD++QRERE+AL FK+G+ PVLVATDVAARGLDI VTQVIN+DLPNNIDDYVHRIGRTGRVGNVG+ALS+MNEKN+NIARE+++L+SENG +IP FL+ MA GGG R GGR +RFGARD+R +
Sbjct: 39 RGGGA-------------RVNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANSGYRGGGRSGRGGRGGRSSSRFGARDYRNE 514
BLAST of EWM25876.1 vs. NCBI_GenBank
Match: gi|325192175|emb|CCA26630.1| (DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]) HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0 Identity = 330/468 (70.51%), Postives = 388/468 (82.91%), Query Frame = 0
Query: 138 RGGGAYRGGNGR-GYGGGGRVNSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDRQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYSGGGG 604
R GG R G R G+G G R+N +G+HGD+R ++RLE +LF + T+GINFDKYDDIPVETSGE P+PI FTE +GP++ NL LC Y KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR+GA +P G SS RK +P AL+LAPTRELASQI+DEA+KFCYCTGV PVV+YGGAEV Q+RELERGCDLLVATPGRLVDL+ER R+SL IRFLILDEADRMLDMGFEPQIRR+VEQE MP +RQTFMFSATFPR++QRLAADF++DYIFL VGRVGSASKDV Q+IE++E HDK YLV FL+Q + GLIL+FVE KR ADYLE LL ++GFP SIHGD+TQRERE AL+ F++G+ PVLVATDVAARGLDI+ VT VIN+DLPNNIDDYVHRIGRTGR GN+GHALS+M +KN+NI+REL+ LL EN + P +L+ MA S G
Sbjct: 80 RYGGRDRKGYDRDGHGHGPRLNERGYHGDIRRNERLEHELF--GDSITSGINFDKYDDIPVETSGENVPDPITIFTEVELGPEVCRNLELCKYMKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLREGA-KPVDGAGSSQRKSHPAALILAPTRELASQIYDEAKKFCYCTGVAPVVLYGGAEVGRQVRELERGCDLLVATPGRLVDLMERGRVSLSGIRFLILDEADRMLDMGFEPQIRRLVEQEDMPRERQTFMFSATFPREMQRLAADFLQDYIFLTVGRVGSASKDVKQQIEFIEPHDKEDYLVRFLNQVQE-GLILVFVETKRGADYLEQLLCREGFPATSIHGDRTQREREAALNSFRSGRTPVLVATDVAARGLDINGVTHVINFDLPNNIDDYVHRIGRTGRAGNLGHALSMMTDKNRNISRELYALLVENSQECPSWLDQMANSSQYG 543 The following BLAST results are available for this feature:
BLAST of EWM25876.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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