EWM25898.1, cds4777 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25898.1 vs. NCBI_GenBank
Match: gi|585107767|gb|EWM25898.1| (hypothetical protein Naga_100048g28 [Nannochloropsis gaditana]) HSP 1 Score: 2200.63 bits (5701), Expect = 0.000e+0 Identity = 1077/1077 (100.00%), Postives = 1077/1077 (100.00%), Query Frame = 0 Query: 1 MSVPNDEEIMPRADEPSTLTRSPPSQTSQAAHASLRPIQSQFSGATPVWRKQRSLLILGAWMAFAGLVILGLVLTISHNESRRQRLLERGSLPSRVMLGPPPSQDVPILGTHCCTTEYGLEASTMAAQATNSAAWSMGHGKHSRAPPSLEARLFREAVADADSTGAGGNQGLSGVVYLVVTPRRTEDALGQLLRRLHEHFLRLHRYPVVVYLASENLTQDSRDHLQATVPSSIVDFRPVPDLLEQHQALQAQGSSGTERKPAILRPEAAAYERALWDFQVSEAPRLLAQEFEWILHLSEDTLLSQDVLLDPFHALRMTDRRLGYMAAHRAVDEEGLWAFGRKFAEQHVLARKGKGEAALHLTWNVPKAIDARWIAYHKSVFTSELYRLMVVALAASPLTDTLPASTPSPTNAPKDASLSRLSQGRRPPLSLPSALFDAGDVLLDPSVAAIAAAVSSSSPTSPSSRIQSEVALDRYRKEGEAAPSPSMVSLRLPDPAAVLTLGSLVTLTQDEFMQYRGLNLERPPKRTDGLQGLSPEEAAGVTRSSWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSPDEKAQATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSREDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLERPAPKALNFVVVQENKSLGGTQTRIACGTGLEESHIAKPAA 1077 MSVPNDEEIMPRADEPSTLTRSPPSQTSQAAHASLRPIQSQFSGATPVWRKQRSLLILGAWMAFAGLVILGLVLTISHNESRRQRLLERGSLPSRVMLGPPPSQDVPILGTHCCTTEYGLEASTMAAQATNSAAWSMGHGKHSRAPPSLEARLFREAVADADSTGAGGNQGLSGVVYLVVTPRRTEDALGQLLRRLHEHFLRLHRYPVVVYLASENLTQDSRDHLQATVPSSIVDFRPVPDLLEQHQALQAQGSSGTERKPAILRPEAAAYERALWDFQVSEAPRLLAQEFEWILHLSEDTLLSQDVLLDPFHALRMTDRRLGYMAAHRAVDEEGLWAFGRKFAEQHVLARKGKGEAALHLTWNVPKAIDARWIAYHKSVFTSELYRLMVVALAASPLTDTLPASTPSPTNAPKDASLSRLSQGRRPPLSLPSALFDAGDVLLDPSVAAIAAAVSSSSPTSPSSRIQSEVALDRYRKEGEAAPSPSMVSLRLPDPAAVLTLGSLVTLTQDEFMQYRGLNLERPPKRTDGLQGLSPEEAAGVTRSSWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSPDEKAQATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSREDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLERPAPKALNFVVVQENKSLGGTQTRIACGTGLEESHIAKPAA Sbjct: 1 MSVPNDEEIMPRADEPSTLTRSPPSQTSQAAHASLRPIQSQFSGATPVWRKQRSLLILGAWMAFAGLVILGLVLTISHNESRRQRLLERGSLPSRVMLGPPPSQDVPILGTHCCTTEYGLEASTMAAQATNSAAWSMGHGKHSRAPPSLEARLFREAVADADSTGAGGNQGLSGVVYLVVTPRRTEDALGQLLRRLHEHFLRLHRYPVVVYLASENLTQDSRDHLQATVPSSIVDFRPVPDLLEQHQALQAQGSSGTERKPAILRPEAAAYERALWDFQVSEAPRLLAQEFEWILHLSEDTLLSQDVLLDPFHALRMTDRRLGYMAAHRAVDEEGLWAFGRKFAEQHVLARKGKGEAALHLTWNVPKAIDARWIAYHKSVFTSELYRLMVVALAASPLTDTLPASTPSPTNAPKDASLSRLSQGRRPPLSLPSALFDAGDVLLDPSVAAIAAAVSSSSPTSPSSRIQSEVALDRYRKEGEAAPSPSMVSLRLPDPAAVLTLGSLVTLTQDEFMQYRGLNLERPPKRTDGLQGLSPEEAAGVTRSSWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSPDEKAQATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSREDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLERPAPKALNFVVVQENKSLGGTQTRIACGTGLEESHIAKPAA 1077
BLAST of EWM25898.1 vs. NCBI_GenBank
Match: gi|585101849|gb|EWM21594.1| (hypothetical protein Naga_100012g47 [Nannochloropsis gaditana]) HSP 1 Score: 236.884 bits (603), Expect = 6.112e-63 Identity = 173/557 (31.06%), Postives = 254/557 (45.60%), Query Frame = 0 Query: 545 SWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVS------------KGGCPVSIF------VRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAM---------MHGDKDAELATGPEDMIYLFGV---NNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVW----------------ALTKGSPDEKA----------------QATTDTDTRLTNTT--WAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELS-REDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLE 1036 +WRG + +EA +LQPL R G+ GADVA S PP GD G+ +WL GDT LG RR+ G +F+HNSVA +PV N A P VVF +S K GCP S+F VRG ++EC +YLWP+SG+ V D + +++A S +++LA RWAY+ V++ + NF +LGTT++VVD+ H P +W YR RD PGT ++NW+ A+ G K LA ++++L G ++ A + + L R+PV+ L+D++ MEVW T +KA A T D ++ + W ++ A L+ PV++ S++YS L +Y V +DWL +L AE +T W+ +Y +PPPFND + M Y GKAHPEL+ E+E++ T++ N PG + PLFE GA +YVPRF+R+ + Sbjct: 144 TWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPP-------------------------------MAGDKGQPHT---LWLLGDTFLGRMEGRRRIPG-YFVHNSVATMPVWNHPSREADP---AQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRG--DENECHEGGEYLWPVSGLAV--------------------DLAAAPSNASASRSFASHLLLLATRWAYLPWIEEDVNM-TRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEGGREGGKQGGLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNL-MAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFD 638
BLAST of EWM25898.1 vs. NCBI_GenBank
Match: gi|585111791|gb|EWM29268.1| (glycolipid 2-alpha-mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 205.297 bits (521), Expect = 3.219e-50 Identity = 149/497 (29.98%), Postives = 227/497 (45.67%), Query Frame = 0 Query: 546 WRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAM-MHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSPDEKAQATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSRED------ELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKL 1035 WR +I A +L L + R G+LG+DVATSFR P A HG YMWL GDT LG ++ +R + N+VAF P + L P DV F W G P + F Q V LWP+SG+ V Y +G V K+++ A R K+H + L + NF + GT+++V++NP A P +W Y D+ GT+ NW+SA+ + G K E+A PED++YL G +G + L R+ V L+ F MEV E+A + ++D + + A + R K ++ P +ETS++Y+ LGA+ + VD +S+ +VL+ A ++ W V++ IP P++D ++Y YAGK HPEL+RE E + +++ NAP D LF+ G +Y P+F+R++L Sbjct: 905 WRDRDISVEPAPELSGLLAPRRFGYLGSDVATSFRLP-------------------------------------SVAGHGSYMWLLGDTYLGTSDGLKRQGMHTTISNAVAFFPSGADLGAAGELLTPSDVTFFWGYDLDGSPTAPFEAEAGQAAGTV-----LWPVSGVSVEY-----------------------------QG--VVKIVLFAQR--VQKTHNLTDFLGVADGMNFEVEGTSLIVIENPAAAPNRWRYSVTDIAGTNGTHNWFSAVAVAGGK--EIADSPEDVLYLVGNVGARGLGVYDDEASKNVLGRIKVTDLLKRRFDRMEVLV-------EEAHESRESDGKELWMSTAEAEASVARRRKG--IISPANAETSLQYNSELGAWVSLAVDSVSAQLVLWSARSVSGPWTSAVIHSIPAPYDDLSLYRCYAGKGHPELAREGLPGGDVEFVFSYVCNAPSDSGILFDEGQLTLYAPQFIRVRL 1315
BLAST of EWM25898.1 vs. NCBI_GenBank
Match: gi|676386611|ref|XP_009036584.1| (hypothetical protein AURANDRAFT_63946 [Aureococcus anophagefferens] >gi|323452708|gb|EGB08581.1| hypothetical protein AURANDRAFT_63946 [Aureococcus anophagefferens]) HSP 1 Score: 63.929 bits (154), Expect = 7.937e-7 Identity = 109/433 (25.17%), Postives = 159/433 (36.72%), Query Frame = 0 Query: 617 GDVGEA---EHGKYMWLFGDTLLGYANEDRRLS-GAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHTASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVW--ALTKGSPDEKAQATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAW-EPVVVYKIPPPFNDPAVYMTYAGKAHPELS-------REDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKL 1035 GDVG + + +W+FGDTL+G+ + RR+S GA H+SV V D A P + + + W GP S+ P E + + + TA V +V+VL R Y + + +F F I G D P P WE LP T NL+ + L GP +YL+G T A G E LSR+P L + +F E W A +G D+ +A A L P +E ++ G+Y + + + S+ V L A W +P VY IPPP ND + YA H S +L+ T++ N L +F GA+ Y+P+F+RL Sbjct: 57 GDVGASCALTPTRTLWVFGDTLIGHWDGKRRVSEGAAMPHSSV------GVWDLGAAPR--DAMTWRW--------------GPGN------------------ASFFRPSWESSKE-----------AFWAAVTAPRLVDGRVLVLGNRVLYT-GEGGPMGFRTNESFIFTIDG----AADRPD-DPASWELDYFSLPHT-GNLS--TGGFVDFARGALLVGP--WLYLYGNVRTAATG------GREVLSRIPWADLRERNFSAQEYWTGAWRRGWGDDLPEAL-------------------------ATLWSPQVAEMQPQWCDKTGSYVALTIPFGSTRVELRAAPAPEGPWTDPRKVYDIPPPQNDTTKFFCYATMQHDVASLPRDPSSPPPDLVFTYVCNGR-TLADVFAPGAEASYIPQFVRLSF 395 The following BLAST results are available for this feature:
BLAST of EWM25898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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