EWM25897.1, cds4763 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|585107766|gb|EWM25897.1| (Uncharacterized protein family CreA [Nannochloropsis gaditana]) HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
Query: 1 MSPTVHSHLQDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQGQRQFRYRPFLKYPDEKYKNMR 382
MSPTVHSHLQDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQGQRQFRYRPFLKYPDEKYKNMR
Sbjct: 1 MSPTVHSHLQDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQGQRQFRYRPFLKYPDEKYKNMR 382
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|873230359|emb|CEM11152.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 306.605 bits (784), Expect = 9.700e-98 Identity = 163/340 (47.94%), Postives = 225/340 (66.18%), Query Frame = 0
Query: 25 SPAVLRQKIEKDY-KAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRY--DPSKGGRVV--EHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVR--LLASTVLPISLSLLSASSLPSSP--ASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMK-NIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPV 354
S A L + I +DY + AYFLTGDI+ Y + C+FTDPT+SF GL TW RNI +LK+ D RL+L++IR+ ++ T+W L+ + LPWRP + + G T H + DP+ GR+V EH E W VSG++A LQLF KGR D + + L ++ P L +LS +L ++ A + + A + A + E+R V +I SGLIFKD++NVEA+ DPKV+GVT+YI+DF RP+TER KDFFSDP+ S+ C ++GPV + + SK GEEV SEARSLLFK+I+VRR+ D++S +IY++YSTRF DD NKSRFKSS+CA+ V
Sbjct: 62 STADLVEAIREDYTQRAYFLTGDINDSLYADECVFTDPTISFKGLQTWKRNIASLKLLTTDRRLDLQDIRVSPEGSSIQTKWTLSVTLKLPWRPLVSISGGTTHYFASDPADSGRLVVTEHVEEWDVSGWEAFLQLFGT-KGRGSDQRDEENNRGIMMAFKNLLKGFSLPPRGLVMLSLFTLFTTVPFADSPQVAQIGTAQAAEKRLVGEIAGSGLIFKDTLNVEAWSDPKVEGVTIYIADFARPITERFQKDFFSDPTSVSLTCAQSGPVKISPSASRSKDGEEVISEARSLLFKSIKVRRLIDEKSNNIIYVAYSTRFGD-DDSNKSRFKSSICALSV 399
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|551601604|ref|XP_005782424.1| (hypothetical protein EMIHUDRAFT_462894 [Emiliania huxleyi CCMP1516] >gi|485635313|gb|EOD29995.1| hypothetical protein EMIHUDRAFT_462894 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 195.667 bits (496), Expect = 1.154e-57 Identity = 98/192 (51.04%), Postives = 135/192 (70.31%), Query Frame = 0
Query: 186 VLPISLSLLSASSLPSSPAST---------LRSAFVARAASDERRQ-----VADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQA--------SVACVRTGPVTM-KNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPV 354
+L + LS +A LP +P+ + LRSA A + RQ VADIPASGL+FKD+I +E F DPKV GV LY++DF+RP+TE+L KDFF+DP+QA SV C RTGPV + + ++ + +GEEVFS++RSL FK+++VRRVYDKE+ ++Y+SYS R SKS+DDNKSRFKS++C +P+
Sbjct: 2 LLLLVLSSATAVQLPQAPSCSTRGATRGAFLRSALAAVSVCGGARQAIAQDVADIPASGLVFKDTIKIEGFTDPKVSGVKLYVADFQRPITEKLQKDFFNDPTQANRAACGPASVTCARTGPVKLLEAVEPNGEGEEVFSQSRSLFFKSVKVRRVYDKEANTIVYVSYSVRLSKSEDDNKSRFKSTMCTVPL 193
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|551607221|ref|XP_005784930.1| (hypothetical protein EMIHUDRAFT_456079 [Emiliania huxleyi CCMP1516] >gi|485638046|gb|EOD32501.1| hypothetical protein EMIHUDRAFT_456079 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 193.356 bits (490), Expect = 1.424e-57 Identity = 84/133 (63.16%), Postives = 114/133 (85.71%), Query Frame = 0
Query: 223 VADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVT-MKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPV 354
VADIPASGL+FKD+I +E F DPKV GV LY++DF+RP+TE+L KDFF+DP+QASV C RTGPV ++ ++ + +GEEVFS++RSL FK+++VRRVYDKE+ ++Y+SYS R SKS+DDNKSRFKS++C +P+
Sbjct: 7 VADIPASGLVFKDTIKIEGFTDPKVSGVKLYVADFQRPITEKLQKDFFNDPTQASVTCARTGPVKLLEAVEPNGEGEEVFSQSRSLFFKSVKVRRVYDKEANTIVYVSYSVRLSKSEDDNKSRFKSTMCTVPL 139
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|397643478|gb|EJK75890.1| (hypothetical protein THAOC_02375 [Thalassiosira oceanica]) HSP 1 Score: 183.341 bits (464), Expect = 6.521e-53 Identity = 95/208 (45.67%), Postives = 132/208 (63.46%), Query Frame = 0
Query: 149 FQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMK-NIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVE 355
Q L +F+ G+ SS+ + + GV SS S+ A L A A +D R + +I SGL+FKD++ VE+F DPKV+GVTLY+S+F RPLTER+ KDFF++PS ASV ++TGP+T+ NID S +GE VF E RSLLFK +RV+R+YD+E K ++Y+S++TR K D NKSRFKSS+ A+ +E
Sbjct: 1 MQPLTSVFRISDGQEGSGSSSDDHVESRRGV----------------LSSFLSASAGALSLATAQAANADGSRTIGEISGSGLVFKDTLKVESFDDPKVKGVTLYVSNFERPLTERIQKDFFTEPSYASVTAIKTGPITVADNIDRSTKGEPVFEEKRSLLFKELRVQRIYDEEKKTVVYVSFNTRLDKGSDSNKSRFKSSISAVSLE 192
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|219120398|ref|XP_002180938.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407654|gb|EEC47590.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 179.489 bits (454), Expect = 1.440e-50 Identity = 80/144 (55.56%), Postives = 114/144 (79.17%), Query Frame = 0
Query: 215 AASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPV--TMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVED 356
A +++ R V + SGL+FKD++ +EAF DPK+QGVTLYIS+F++P+TERL FF+DPS ASVAC +T P NI++S QGE+VF+E++SLLFK++RV+R+YD + + +Y+S++TR KSDD NKSRFKSSLCA+P+ +
Sbjct: 90 AVANDARVVGQLQGSGLVFKDTLQIEAFDDPKIQGVTLYISNFQKPITERLNAGFFNDPSYASVACAQTSPNIRVADNINVSPQGEQVFTESKSLLFKSLRVQRIYDVDKQTAVYVSFNTRLDKSDDSNKSRFKSSLCAVPLSN 233
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|1210524115|dbj|GAX16844.1| (hypothetical protein FisN_5Hh217 [Fistulifera solaris]) HSP 1 Score: 177.178 bits (448), Expect = 1.528e-49 Identity = 81/157 (51.59%), Postives = 121/157 (77.07%), Query Frame = 0
Query: 204 ASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERL--AKDFFSDPSQASVACVRTGP--VTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVED 356
+T+ +A +A + E + + I SGL+FKD++ VE+F+DPKV+GVTLYIS+F+RP+ ERL AK+FFSDPS A+VAC RTG + NI+ + GEEVF E++SLLFK+++V+R++D E +IY+S++TR K+DDDNKSRF++SLCA+ +++
Sbjct: 88 CTTVLAAPLAPVQAAESQVIGQITGSGLVFKDTLQVESFEDPKVRGVTLYISNFQRPINERLSSAKNFFSDPSSAAVACARTGQTVIVADNINTTPAGEEVFKESKSLLFKSLKVQRIFDMEHNTVIYVSFNTRIDKNDDDNKSRFQNSLCAVNLDN 244
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|298710053|emb|CBJ31770.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 173.711 bits (439), Expect = 1.638e-48 Identity = 95/192 (49.48%), Postives = 132/192 (68.75%), Query Frame = 0
Query: 166 ASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAK-DFFSDPSQASVACVRTGPVTMKN-IDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVE 355
+ +AS T +F GV+ A T I L+L A + S P + A++ ++R V +I ASGL+FKD +NVEAF DPKV+GVTLY+SDF RP+ ++L D FSDPS A++ CVR+GP+ +K+ I SK+GEE+F E RS FK+I VRR+YDKE+ ++Y+SYS++ D NKSRFKSSLCA+ +E
Sbjct: 69 SGAASGTTRFARGVKA-ALTSAAIGLTL--AGPMLSLPGT---------ASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 247
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|1210527251|dbj|GAX13886.1| (hypothetical protein FisN_5Lh217 [Fistulifera solaris]) HSP 1 Score: 174.481 bits (441), Expect = 1.690e-48 Identity = 81/148 (54.73%), Postives = 117/148 (79.05%), Query Frame = 0
Query: 213 ARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERL--AKDFFSDPSQASVACVRTGP--VTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVED 356
ARAA E + + I SGL+FKD++ VE+F+DPKV+GVTLYIS+F+RP+ ERL AK+FFSDPS A+VAC RTG + NI+ + GEEVF E++SLLFK+++V+R++D + +IY+S++TR K+DDDNKSRF++SLCA+ +++
Sbjct: 104 ARAA--ESQVIGQITGSGLVFKDTLQVESFEDPKVRGVTLYISNFQRPINERLSSAKNFFSDPSSAAVACARTGQKVIVADNINTTPAGEEVFKESKSLLFKSLKVQRIFDMDHNTVIYVSFNTRMDKNDDDNKSRFQNSLCAVNLDN 249
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|1129212940|gb|OLQ13931.1| (hypothetical protein AK812_SmicGene1986 [Symbiodinium microadriaticum]) HSP 1 Score: 171.014 bits (432), Expect = 1.276e-47 Identity = 88/198 (44.44%), Postives = 132/198 (66.67%), Query Frame = 0
Query: 162 RPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAK-DFFSDPSQASVACVRTGPVTMK-NIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDV 357
RP DA S A +R A+T L I L L A ++ A+++ +R V +IPASG IFKD+INVEAF+DPKV GV+LYISDF R + +R++K DFFSDP A + C R GPV + ++ SK+GE+VF+E+R++LFKT++V+R+YD ++K ++Y++++ R ++D NKSRFKS + A+ ++ V
Sbjct: 52 RPYDAQSDEHLAPNLELIRGAAATGLAILLGLF---------------AVLSPASAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHIDGV 234 The following BLAST results are available for this feature:
BLAST of EWM25897.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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