EWM25897.1, cds4763 (CDS) Nannochloropsis gaditana

Overview
NameEWM25897.1
Unique Namecds4763
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:324084..324109 -
Alignment locationCM002464.1:323861..324012 -
Alignment locationCM002464.1:323684..323792 -
Alignment locationCM002464.1:323012..323594 -
Alignment locationCM002464.1:322622..322842 -
Alignment locationCM002464.1:322517..322574 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25897.1
ProductUncharacterized protein family CreA
Orig transcript idgnl|cribi|Naga_100048g11.10269.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:324084..324109 -
CM002464.1supercontigCM002464.1:323861..324012 -
CM002464.1supercontigCM002464.1:323684..323792 -
CM002464.1supercontigCM002464.1:323012..323594 -
CM002464.1supercontigCM002464.1:322622..322842 -
CM002464.1supercontigCM002464.1:322517..322574 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358
IPR010292Uncharacterised_CreA
Homology
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|585107766|gb|EWM25897.1| (Uncharacterized protein family CreA [Nannochloropsis gaditana])

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
Query:    1 MSPTVHSHLQDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQGQRQFRYRPFLKYPDEKYKNMR 382
            MSPTVHSHLQDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQGQRQFRYRPFLKYPDEKYKNMR
Sbjct:    1 MSPTVHSHLQDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQGQRQFRYRPFLKYPDEKYKNMR 382          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|873230359|emb|CEM11152.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 306.605 bits (784), Expect = 9.700e-98
Identity = 163/340 (47.94%), Postives = 225/340 (66.18%), Query Frame = 0
Query:   25 SPAVLRQKIEKDY-KAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRY--DPSKGGRVV--EHTEYWAVSGFQALLQLFKPGKGRPMDASSASSTAQFQAGVR--LLASTVLPISLSLLSASSLPSSP--ASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMK-NIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPV 354
            S A L + I +DY + AYFLTGDI+   Y + C+FTDPT+SF GL TW RNI +LK+   D RL+L++IR+     ++ T+W L+  + LPWRP + + G T H +  DP+  GR+V  EH E W VSG++A LQLF   KGR  D     +        +  L   ++ P  L +LS  +L ++   A + + A +  A + E+R V +I  SGLIFKD++NVEA+ DPKV+GVT+YI+DF RP+TER  KDFFSDP+  S+ C ++GPV +  +   SK GEEV SEARSLLFK+I+VRR+ D++S  +IY++YSTRF   DD NKSRFKSS+CA+ V
Sbjct:   62 STADLVEAIREDYTQRAYFLTGDINDSLYADECVFTDPTISFKGLQTWKRNIASLKLLTTDRRLDLQDIRVSPEGSSIQTKWTLSVTLKLPWRPLVSISGGTTHYFASDPADSGRLVVTEHVEEWDVSGWEAFLQLFGT-KGRGSDQRDEENNRGIMMAFKNLLKGFSLPPRGLVMLSLFTLFTTVPFADSPQVAQIGTAQAAEKRLVGEIAGSGLIFKDTLNVEAWSDPKVEGVTIYIADFARPITERFQKDFFSDPTSVSLTCAQSGPVKISPSASRSKDGEEVISEARSLLFKSIKVRRLIDEKSNNIIYVAYSTRFGD-DDSNKSRFKSSICALSV 399          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|551601604|ref|XP_005782424.1| (hypothetical protein EMIHUDRAFT_462894 [Emiliania huxleyi CCMP1516] >gi|485635313|gb|EOD29995.1| hypothetical protein EMIHUDRAFT_462894 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 195.667 bits (496), Expect = 1.154e-57
Identity = 98/192 (51.04%), Postives = 135/192 (70.31%), Query Frame = 0
Query:  186 VLPISLSLLSASSLPSSPAST---------LRSAFVARAASDERRQ-----VADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQA--------SVACVRTGPVTM-KNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPV 354
            +L + LS  +A  LP +P+ +         LRSA  A +     RQ     VADIPASGL+FKD+I +E F DPKV GV LY++DF+RP+TE+L KDFF+DP+QA        SV C RTGPV + + ++ + +GEEVFS++RSL FK+++VRRVYDKE+  ++Y+SYS R SKS+DDNKSRFKS++C +P+
Sbjct:    2 LLLLVLSSATAVQLPQAPSCSTRGATRGAFLRSALAAVSVCGGARQAIAQDVADIPASGLVFKDTIKIEGFTDPKVSGVKLYVADFQRPITEKLQKDFFNDPTQANRAACGPASVTCARTGPVKLLEAVEPNGEGEEVFSQSRSLFFKSVKVRRVYDKEANTIVYVSYSVRLSKSEDDNKSRFKSTMCTVPL 193          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|551607221|ref|XP_005784930.1| (hypothetical protein EMIHUDRAFT_456079 [Emiliania huxleyi CCMP1516] >gi|485638046|gb|EOD32501.1| hypothetical protein EMIHUDRAFT_456079 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 193.356 bits (490), Expect = 1.424e-57
Identity = 84/133 (63.16%), Postives = 114/133 (85.71%), Query Frame = 0
Query:  223 VADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVT-MKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPV 354
            VADIPASGL+FKD+I +E F DPKV GV LY++DF+RP+TE+L KDFF+DP+QASV C RTGPV  ++ ++ + +GEEVFS++RSL FK+++VRRVYDKE+  ++Y+SYS R SKS+DDNKSRFKS++C +P+
Sbjct:    7 VADIPASGLVFKDTIKIEGFTDPKVSGVKLYVADFQRPITEKLQKDFFNDPTQASVTCARTGPVKLLEAVEPNGEGEEVFSQSRSLFFKSVKVRRVYDKEANTIVYVSYSVRLSKSEDDNKSRFKSTMCTVPL 139          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|397643478|gb|EJK75890.1| (hypothetical protein THAOC_02375 [Thalassiosira oceanica])

HSP 1 Score: 183.341 bits (464), Expect = 6.521e-53
Identity = 95/208 (45.67%), Postives = 132/208 (63.46%), Query Frame = 0
Query:  149 FQALLQLFKPGKGRPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMK-NIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVE 355
             Q L  +F+   G+    SS+    + + GV                 SS  S+ A  L  A    A +D  R + +I  SGL+FKD++ VE+F DPKV+GVTLY+S+F RPLTER+ KDFF++PS ASV  ++TGP+T+  NID S +GE VF E RSLLFK +RV+R+YD+E K ++Y+S++TR  K  D NKSRFKSS+ A+ +E
Sbjct:    1 MQPLTSVFRISDGQEGSGSSSDDHVESRRGV----------------LSSFLSASAGALSLATAQAANADGSRTIGEISGSGLVFKDTLKVESFDDPKVKGVTLYVSNFERPLTERIQKDFFTEPSYASVTAIKTGPITVADNIDRSTKGEPVFEEKRSLLFKELRVQRIYDEEKKTVVYVSFNTRLDKGSDSNKSRFKSSISAVSLE 192          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|219120398|ref|XP_002180938.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407654|gb|EEC47590.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 179.489 bits (454), Expect = 1.440e-50
Identity = 80/144 (55.56%), Postives = 114/144 (79.17%), Query Frame = 0
Query:  215 AASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPV--TMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVED 356
            A +++ R V  +  SGL+FKD++ +EAF DPK+QGVTLYIS+F++P+TERL   FF+DPS ASVAC +T P      NI++S QGE+VF+E++SLLFK++RV+R+YD + +  +Y+S++TR  KSDD NKSRFKSSLCA+P+ +
Sbjct:   90 AVANDARVVGQLQGSGLVFKDTLQIEAFDDPKIQGVTLYISNFQKPITERLNAGFFNDPSYASVACAQTSPNIRVADNINVSPQGEQVFTESKSLLFKSLRVQRIYDVDKQTAVYVSFNTRLDKSDDSNKSRFKSSLCAVPLSN 233          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|1210524115|dbj|GAX16844.1| (hypothetical protein FisN_5Hh217 [Fistulifera solaris])

HSP 1 Score: 177.178 bits (448), Expect = 1.528e-49
Identity = 81/157 (51.59%), Postives = 121/157 (77.07%), Query Frame = 0
Query:  204 ASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERL--AKDFFSDPSQASVACVRTGP--VTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVED 356
             +T+ +A +A   + E + +  I  SGL+FKD++ VE+F+DPKV+GVTLYIS+F+RP+ ERL  AK+FFSDPS A+VAC RTG   +   NI+ +  GEEVF E++SLLFK+++V+R++D E   +IY+S++TR  K+DDDNKSRF++SLCA+ +++
Sbjct:   88 CTTVLAAPLAPVQAAESQVIGQITGSGLVFKDTLQVESFEDPKVRGVTLYISNFQRPINERLSSAKNFFSDPSSAAVACARTGQTVIVADNINTTPAGEEVFKESKSLLFKSLKVQRIFDMEHNTVIYVSFNTRIDKNDDDNKSRFQNSLCAVNLDN 244          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|298710053|emb|CBJ31770.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 173.711 bits (439), Expect = 1.638e-48
Identity = 95/192 (49.48%), Postives = 132/192 (68.75%), Query Frame = 0
Query:  166 ASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAK-DFFSDPSQASVACVRTGPVTMKN-IDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVE 355
            + +AS T +F  GV+  A T   I L+L  A  + S P +         A++ ++R V +I ASGL+FKD +NVEAF DPKV+GVTLY+SDF RP+ ++L   D FSDPS A++ CVR+GP+ +K+ I  SK+GEE+F E RS  FK+I VRR+YDKE+  ++Y+SYS++     D NKSRFKSSLCA+ +E
Sbjct:   69 SGAASGTTRFARGVKA-ALTSAAIGLTL--AGPMLSLPGT---------ASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSF-FKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 247          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|1210527251|dbj|GAX13886.1| (hypothetical protein FisN_5Lh217 [Fistulifera solaris])

HSP 1 Score: 174.481 bits (441), Expect = 1.690e-48
Identity = 81/148 (54.73%), Postives = 117/148 (79.05%), Query Frame = 0
Query:  213 ARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERL--AKDFFSDPSQASVACVRTGP--VTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVED 356
            ARAA  E + +  I  SGL+FKD++ VE+F+DPKV+GVTLYIS+F+RP+ ERL  AK+FFSDPS A+VAC RTG   +   NI+ +  GEEVF E++SLLFK+++V+R++D +   +IY+S++TR  K+DDDNKSRF++SLCA+ +++
Sbjct:  104 ARAA--ESQVIGQITGSGLVFKDTLQVESFEDPKVRGVTLYISNFQRPINERLSSAKNFFSDPSSAAVACARTGQKVIVADNINTTPAGEEVFKESKSLLFKSLKVQRIFDMDHNTVIYVSFNTRMDKNDDDNKSRFQNSLCAVNLDN 249          
BLAST of EWM25897.1 vs. NCBI_GenBank
Match: gi|1129212940|gb|OLQ13931.1| (hypothetical protein AK812_SmicGene1986 [Symbiodinium microadriaticum])

HSP 1 Score: 171.014 bits (432), Expect = 1.276e-47
Identity = 88/198 (44.44%), Postives = 132/198 (66.67%), Query Frame = 0
Query:  162 RPMDASSASSTAQFQAGVRLLASTVLPISLSLLSASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAK-DFFSDPSQASVACVRTGPVTMK-NIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDV 357
            RP DA S    A     +R  A+T L I L L                A ++ A+++ +R V +IPASG IFKD+INVEAF+DPKV GV+LYISDF R + +R++K DFFSDP  A + C R GPV +  ++  SK+GE+VF+E+R++LFKT++V+R+YD ++K ++Y++++ R   ++D NKSRFKS + A+ ++ V
Sbjct:   52 RPYDAQSDEHLAPNLELIRGAAATGLAILLGLF---------------AVLSPASAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHIDGV 234          
The following BLAST results are available for this feature:
BLAST of EWM25897.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107766|gb|EWM25897.1|0.000e+0100.00Uncharacterized protein family CreA [Nannochlorops... [more]
gi|873230359|emb|CEM11152.1|9.700e-9847.94unnamed protein product [Vitrella brassicaformis C... [more]
gi|551601604|ref|XP_005782424.1|1.154e-5751.04hypothetical protein EMIHUDRAFT_462894 [Emiliania ... [more]
gi|551607221|ref|XP_005784930.1|1.424e-5763.16hypothetical protein EMIHUDRAFT_456079 [Emiliania ... [more]
gi|397643478|gb|EJK75890.1|6.521e-5345.67hypothetical protein THAOC_02375 [Thalassiosira oc... [more]
gi|219120398|ref|XP_002180938.1|1.440e-5055.56predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210524115|dbj|GAX16844.1|1.528e-4951.59hypothetical protein FisN_5Hh217 [Fistulifera sola... [more]
gi|298710053|emb|CBJ31770.1|1.638e-4849.48conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210527251|dbj|GAX13886.1|1.690e-4854.73hypothetical protein FisN_5Lh217 [Fistulifera sola... [more]
gi|1129212940|gb|OLQ13931.1|1.276e-4744.44hypothetical protein AK812_SmicGene1986 [Symbiodin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4775rna4775Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications