EWM25893.1, cds4758 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25893.1 vs. NCBI_GenBank
Match: gi|585107762|gb|EWM25893.1| (hypothetical protein Naga_100048g6 [Nannochloropsis gaditana]) HSP 1 Score: 2613.56 bits (6773), Expect = 0.000e+0 Identity = 1276/1276 (100.00%), Postives = 1276/1276 (100.00%), Query Frame = 0
Query: 1 MSEPQPSDPYLQEQHDRNMSPDQGTGKWTKGEAEDVHCDTSAAMAKLNSAPTRPHKAFNPTTKKLPCPHHKDVIVCRHKLRTGVTTIPCWRCMGEAAVRAEERETTAEIRAQYLHIALQSEKGRTAMLERRATLLEEEQVGLRDQIARLIEQVAALSEEVNRVNGMNRRLMTQFRPNKSTPLKDCLKSGHSVHKTLSEVSAPDLASPSTAPTTATSATAPTTATSATAPIADPGETTTQPPEQAHSTCTSSTPLSGSPGKDVTLSAPGGEAGPPLSLSCRPPPPRNQEPSHVSSAWSASPPTPSESVAARPLPASPTASASRALSATAGSQGAAWRARAATDPEVAPIRVATGPHKITSMTAGTHSQAPTESAAGGGSGSMPPSRPSLPAWLQGKRQAEAGPRAQGGEQNERQKSRTPQEGGRPKDGKKKRVWTLFKRGKRASSIPAAAAAASGGVRAPTTMDELDEALPVDRMAKRMLRLLESRPEALEKIYRKSEQLEEWRMEVLLELGVGEETGGREDGGSLQEGEEDKEKKAEGEGRTSPVQGLDHSASRIFLDEIALVEALTDRIKQCVLRHVADAFTLARASPSLLHQAVNVVRLHAAFGKKKLETAQAKIARTGSKDLYRVLRLCGIEDWDGDVRLALKEAASVRALEVFTVAHLEAAAAMEEGGQTSVMGVSREKAMIGAAESLLEDMREMLVLVPPFFAPAHRAVSTILEEYDTHLMRQVAALHGHGLSDLEIGDLFEVNRFLLRYRRDIVVLGASAPNANLQMAVQACLQECLVKTRHQTSVWFTAILGRQGEVLYDAQGRPFTAKPEDLFQIIHTQVRVAIDAGGFTGDDLCALLLVILNALKEFVAEHHNDLRAHEYEAQGRGKGGGGAIPLSVSGLCALVNDYDRLYDKAVELRDNLLGRGELSEKKHFVLLDNVMDQLNDEQARVSFEATRLVSYQIMQEATVSLLEISPFDTEGRAPVRKLPTGVSDGGGMPVWVGTGDRSGLGNRRNRGANPSGERPQGSDKDAQNDGNSTHMFSMPYATTLLDRTTERKTSASPRHVDVMKEACLTIMDYFADIQVWLPAYFFAHVVRMCYESLVDLYLVSVLRGRTVFVDPESVAHRMRQEQQKLLLDLARKNGWESSLREAGLKDPALVFGAWEAMERVVLRGGGMNEKETADLLMVLPPPWNVDALLQLRLLRGEDLGDRKAIHETRQRLTAWYMAELQPQVLGAALAGSGQSARKEGEADAATVGRELAWRLKTSPLAVDEDRLVELVRESVYNQ 1276
MSEPQPSDPYLQEQHDRNMSPDQGTGKWTKGEAEDVHCDTSAAMAKLNSAPTRPHKAFNPTTKKLPCPHHKDVIVCRHKLRTGVTTIPCWRCMGEAAVRAEERETTAEIRAQYLHIALQSEKGRTAMLERRATLLEEEQVGLRDQIARLIEQVAALSEEVNRVNGMNRRLMTQFRPNKSTPLKDCLKSGHSVHKTLSEVSAPDLASPSTAPTTATSATAPTTATSATAPIADPGETTTQPPEQAHSTCTSSTPLSGSPGKDVTLSAPGGEAGPPLSLSCRPPPPRNQEPSHVSSAWSASPPTPSESVAARPLPASPTASASRALSATAGSQGAAWRARAATDPEVAPIRVATGPHKITSMTAGTHSQAPTESAAGGGSGSMPPSRPSLPAWLQGKRQAEAGPRAQGGEQNERQKSRTPQEGGRPKDGKKKRVWTLFKRGKRASSIPAAAAAASGGVRAPTTMDELDEALPVDRMAKRMLRLLESRPEALEKIYRKSEQLEEWRMEVLLELGVGEETGGREDGGSLQEGEEDKEKKAEGEGRTSPVQGLDHSASRIFLDEIALVEALTDRIKQCVLRHVADAFTLARASPSLLHQAVNVVRLHAAFGKKKLETAQAKIARTGSKDLYRVLRLCGIEDWDGDVRLALKEAASVRALEVFTVAHLEAAAAMEEGGQTSVMGVSREKAMIGAAESLLEDMREMLVLVPPFFAPAHRAVSTILEEYDTHLMRQVAALHGHGLSDLEIGDLFEVNRFLLRYRRDIVVLGASAPNANLQMAVQACLQECLVKTRHQTSVWFTAILGRQGEVLYDAQGRPFTAKPEDLFQIIHTQVRVAIDAGGFTGDDLCALLLVILNALKEFVAEHHNDLRAHEYEAQGRGKGGGGAIPLSVSGLCALVNDYDRLYDKAVELRDNLLGRGELSEKKHFVLLDNVMDQLNDEQARVSFEATRLVSYQIMQEATVSLLEISPFDTEGRAPVRKLPTGVSDGGGMPVWVGTGDRSGLGNRRNRGANPSGERPQGSDKDAQNDGNSTHMFSMPYATTLLDRTTERKTSASPRHVDVMKEACLTIMDYFADIQVWLPAYFFAHVVRMCYESLVDLYLVSVLRGRTVFVDPESVAHRMRQEQQKLLLDLARKNGWESSLREAGLKDPALVFGAWEAMERVVLRGGGMNEKETADLLMVLPPPWNVDALLQLRLLRGEDLGDRKAIHETRQRLTAWYMAELQPQVLGAALAGSGQSARKEGEADAATVGRELAWRLKTSPLAVDEDRLVELVRESVYNQ
Sbjct: 1 MSEPQPSDPYLQEQHDRNMSPDQGTGKWTKGEAEDVHCDTSAAMAKLNSAPTRPHKAFNPTTKKLPCPHHKDVIVCRHKLRTGVTTIPCWRCMGEAAVRAEERETTAEIRAQYLHIALQSEKGRTAMLERRATLLEEEQVGLRDQIARLIEQVAALSEEVNRVNGMNRRLMTQFRPNKSTPLKDCLKSGHSVHKTLSEVSAPDLASPSTAPTTATSATAPTTATSATAPIADPGETTTQPPEQAHSTCTSSTPLSGSPGKDVTLSAPGGEAGPPLSLSCRPPPPRNQEPSHVSSAWSASPPTPSESVAARPLPASPTASASRALSATAGSQGAAWRARAATDPEVAPIRVATGPHKITSMTAGTHSQAPTESAAGGGSGSMPPSRPSLPAWLQGKRQAEAGPRAQGGEQNERQKSRTPQEGGRPKDGKKKRVWTLFKRGKRASSIPAAAAAASGGVRAPTTMDELDEALPVDRMAKRMLRLLESRPEALEKIYRKSEQLEEWRMEVLLELGVGEETGGREDGGSLQEGEEDKEKKAEGEGRTSPVQGLDHSASRIFLDEIALVEALTDRIKQCVLRHVADAFTLARASPSLLHQAVNVVRLHAAFGKKKLETAQAKIARTGSKDLYRVLRLCGIEDWDGDVRLALKEAASVRALEVFTVAHLEAAAAMEEGGQTSVMGVSREKAMIGAAESLLEDMREMLVLVPPFFAPAHRAVSTILEEYDTHLMRQVAALHGHGLSDLEIGDLFEVNRFLLRYRRDIVVLGASAPNANLQMAVQACLQECLVKTRHQTSVWFTAILGRQGEVLYDAQGRPFTAKPEDLFQIIHTQVRVAIDAGGFTGDDLCALLLVILNALKEFVAEHHNDLRAHEYEAQGRGKGGGGAIPLSVSGLCALVNDYDRLYDKAVELRDNLLGRGELSEKKHFVLLDNVMDQLNDEQARVSFEATRLVSYQIMQEATVSLLEISPFDTEGRAPVRKLPTGVSDGGGMPVWVGTGDRSGLGNRRNRGANPSGERPQGSDKDAQNDGNSTHMFSMPYATTLLDRTTERKTSASPRHVDVMKEACLTIMDYFADIQVWLPAYFFAHVVRMCYESLVDLYLVSVLRGRTVFVDPESVAHRMRQEQQKLLLDLARKNGWESSLREAGLKDPALVFGAWEAMERVVLRGGGMNEKETADLLMVLPPPWNVDALLQLRLLRGEDLGDRKAIHETRQRLTAWYMAELQPQVLGAALAGSGQSARKEGEADAATVGRELAWRLKTSPLAVDEDRLVELVRESVYNQ 1276
BLAST of EWM25893.1 vs. NCBI_GenBank
Match: gi|585106604|gb|EWM24972.1| (Exocyst complex component Sec6 [Nannochloropsis gaditana]) HSP 1 Score: 213.772 bits (543), Expect = 2.074e-53 Identity = 151/474 (31.86%), Postives = 242/474 (51.05%), Query Frame = 0
Query: 481 LLESRPEALEKIYRKSEQLEEWRMEVLLELGVGEETGGREDGGSLQEGEEDKEKKAEGEGRTSPVQGLDHSASRIFLDEIALVEALTDRIKQCVLRHVADAFTLARASPSLLHQAVNVVRLHAAFGKKKLETAQAKIARTGSKDLYRVLRLCGIEDWDGDVRLALKEAASVRALEVFTVAHLEAAA---AMEEGGQTSVMGVSREKAMIGAAESLLEDMREMLVLVPPFFAPAHRAVSTILEEYDTHLMRQVAALHGHGLSDLEIGDLFEVNRFLLRYRRDIVVLGASAPNANLQMAVQACLQECLVKTRHQTSVWFTAILGRQGEVLYDAQGRPFTAKPEDLFQIIHTQVRVAIDAGGFTGDDLCALLLVILNALKEFVAEHHNDLRAHEYE-------AQGRGKGGGGAIPLSVSGLCALVNDYDRLYDKAVELRDNLLGRGELSEKKHFVLLDNVMDQLNDEQARVSFEAT 944
LLE +P L +++ + +QLE WR E+L EL V + GS + G R V + I L+E V+ L D I++ + ++++ F + + P +L + +V +HAAF K+K A+ + A S+D+ + L +ED D+ LK+ RA +F EA A ++ G S + A +GAA +L D+ + V P F + + T +Y+ L++++ L+ G S L+ G+L ++ +L Y + IV LGA P + A+ CLQE LV+ R Q + WFT IL R EV ++ G+P T+ PED F IIH QV VA+ + D++CA+++V LN +K + E LR + E A+ R + G P+++ +CA VNDYDRL +K E R+ L G+LSE +H V++D +D + D ++ EA
Sbjct: 177 LLEKQPMQLRQVHLEGQQLELWRDELLRELKVQQ--------GSKTMAPPPSKSGIGGPSRVVSVGDRMQATFGIHLEE---VKKLLDAIRKKIFDNISNCFEIVQLDPRILTSTLEIVDMHAAFQKQKATRARER-AEKNSEDVEEAVALSLLEDLRADLMSKLKQRVDDRASVMFAQTQAEAIAKEASVTTAGDASHVQPDVFAATLGAATRILVDLNYLKAEVAPCFPDDYMVMDTFRMQYERCLVKEICKLYQGGFSKLDQGELLQLMEWLDYYNQAIVHLGARTPCSEFVQALSICLQEYLVRVRIQMTEWFTNILNRVQEVAVNSAGQPITSTPEDFFNIIHLQVLVAL--SKLSADNMCAVIVVCLNVIKTILEETLTTLRDKKLELAFPPTMAKERQREGD---PVTLEMMCATVNDYDRLQEKIQEFREELGLMGKLSE-EHLVMVDAAVDHVLDGFVSIADEAN 632 HSP 2 Score: 91.6633 bits (226), Expect = 5.390e-15 Identity = 68/227 (29.96%), Postives = 112/227 (49.34%), Query Frame = 0
Query: 1054 VDVM-KEACLTIMDYFADIQVWLPAYFFAHVVRMCYESLVDLYLVSVLR-----GRTV--------FVDPESVAHRMRQEQQKLLLDLARKNGWESSLREAGLKDPALVFGAWEAMERVV--LRGGGMNEKETADLLMVLPPPWNVDALLQLRLLRGEDLGDRKAIHETRQRLTAWYMAELQPQVLGAALAGSGQSARKEGEAD-AATVGRELAWRLKTSPLAVDED 1263
VDVM ++ +T DY++D+ VWLP ++FA +V+ C E ++ LYL + R G+ F DP VA ++R +++ + + + +E LR AGL++PA + ++ +V GG E + D L+ PW VDALL + LRG+ D+ + + ++RL ++P + GA GQ+ D AA R + R SP + D
Sbjct: 660 VDVMMQKVAMTFHDYYSDLSVWLPPFYFARLVKECLEKVMALYLFFLFRRGGAKGKDEKAVVKSRPFADPLVVAQKLRNDREAMAIFF---DDYEEQLRIAGLREPAALELQLAVLDHIVDLFEGGVTLETDATDALLREFGPWGVDALLAISFLRGD--KDKTGL-DLKERLKRHCARTIRPTLRGAG----GQAGLSNFTYDGAAEAPRNFSARFSLSPFDSEVD 876 The following BLAST results are available for this feature:
BLAST of EWM25893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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