EWM25925.1, cds4747 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|585107796|gb|EWM25925.1| (hypothetical protein Naga_100134g12 [Nannochloropsis gaditana]) HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0 Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 0
Query: 1 MSSSRESVLCDSQQAPVEVRSTWSKGLLWSITCCAVLVIAFILAAFSETGRTRASRWYGTIIFKIKPPMVPVAPFLLTDRKSFESEELHYLWKVENQREIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLCPS 473
MSSSRESVLCDSQQAPVEVRSTWSKGLLWSITCCAVLVIAFILAAFSETGRTRASRWYGTIIFKIKPPMVPVAPFLLTDRKSFESEELHYLWKVENQREIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLCPS
Sbjct: 1 MSSSRESVLCDSQQAPVEVRSTWSKGLLWSITCCAVLVIAFILAAFSETGRTRASRWYGTIIFKIKPPMVPVAPFLLTDRKSFESEELHYLWKVENQREIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLCPS 473
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|585107793|gb|EWM25922.1| (hypothetical protein Naga_100134g10 [Nannochloropsis gaditana]) HSP 1 Score: 877.47 bits (2266), Expect = 0.000e+0 Identity = 420/474 (88.61%), Postives = 438/474 (92.41%), Query Frame = 0
Query: 1 MSSSRESVLCDSQQAPVEVRSTWSKGLLWSITCCAVLVIAFILAAFSETGRTRASR-WYGTIIFKIKPPMVPVAPFLLTDRKSFESEELHYLWKVENQREIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLCPS 473
M SRES++C SQ+ P+ +RSTWS L S+ CC VL FILAA S R SR WY T + I+ PMVPVAPFLLTDR+SF+SEELH+ WKV+NQ EIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQY+NLVNFLENGVWGGPDPQLENE QWKG+ FYQGTNARFNGRE CDCYREEPA+RRGNIENRYYHNEVLDVWVTFF WFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTS+RSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWV+DVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLE+LAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWD LHFYAPVY GLNKVLLNYLCPS
Sbjct: 27 MKRSRESIMCASQEDPLVMRSTWSITLFRSVNCCVVLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVAPFLLTDRESFKSEELHFSWKVDNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCPS 500
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|553178354|ref|XP_005852543.1| (hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526] >gi|422295989|gb|EKU23288.1| hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 333.183 bits (853), Expect = 1.026e-110 Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0
Query: 149 IVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLL 311
++ ++ RYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTS+RSDASAMPLTSTLHLL
Sbjct: 3 LIPFNETFVRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLL 165
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|552817289|ref|XP_005844900.1| (hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis] >gi|307104545|gb|EFN52798.1| hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis]) HSP 1 Score: 125.176 bits (313), Expect = 5.224e-28 Identity = 108/368 (29.35%), Postives = 144/368 (39.13%), Query Frame = 0
Query: 124 LVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGP------DPQLENEFQWKGWLPFYQGTNARFNGREICDCYREE--------PAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLE--QLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQR----QGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLC 471
L + G M+ + A CL K +V VGDSLTRYQYL L+ FLE G W P P + NE W F +GT+A F GRE+CDCYR E P E+ ENR++ V+ F + GH P GQTP C P C+Q W +D+ VV L P ++ NSG WG D + +A + + +V GRV+++TTT R P AP D + +G +LDA AIT P+ + N+ + WD H+ A VY LN LLN +C
Sbjct: 105 LSIRGCTMKRY-SHAEAKQCLAGKRLVFVGDSLTRYQYLALIYFLEKGEWPAPLGGVPGQPSVTNEHDWND---FLRGTSALFGGRELCDCYRREYILGVTPRPPEKE-KFENRFFITADGATAVSHFTYTTAPHTVHGH-------------FGFPPHLMGQTP---------------------------------------------------CAPATCNQTADWAFDL--ALRRVVRPLQPTHVIINSGMWGSSNAFGDDKWRSIAAAGLYSVFEQLGRVIWRTTTAAR--GPRAPTRDHDALALKHTAAEGWGVLDAYAITRPLVKMLNKPM--------WDPRHYQAVVYRELNLYLLNMIC 391
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|929750758|ref|XP_014150362.1| (hypothetical protein SARC_11039 [Sphaeroforma arctica JP610] >gi|906943083|gb|KNC76460.1| hypothetical protein SARC_11039 [Sphaeroforma arctica JP610]) HSP 1 Score: 87.0409 bits (214), Expect = 5.905e-15 Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = 0
Query: 123 TLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQ-------WK---GWLPFYQGTNARFNGREICDCYREEPAERRGNI-ENRYYHNEVLDVWVTFF 237
+LVVDG D + F R AL L K ++MVGDS RYQYL++ +LENG W PD E + + W+ GW F+ TN+ NG E CDC+RE+ I ENRY H E +V VT+
Sbjct: 91 SLVVDGCDWRKFT-RKGALQILSGKHLIMVGDSRVRYQYLSMAFWLENGYW-PPDTYGEGDIKSPAKEGLWRDIGGWKQFFSDTNSYLNGEEECDCFREDKWPIENIIFENRYLHMEKYNVKVTYL 214
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|553192159|ref|XP_005855524.1| (hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526] >gi|422293536|gb|EKU20836.1| hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.411 bits (189), Expect = 7.154e-13 Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 0
Query: 155 SLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKG-------WLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWF--NPACGH 246
+L+RYQYL+L+ +LE G W + E +KG W FY+ ++A F RE+CDCYREE + ++ENRYY NE D+ V+F WF +P GH
Sbjct: 2 TLSRYQYLSLIRYLEEGAW---EATQEKTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREE--GKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGH 97
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|1210530122|dbj|GAX11230.1| (hypothetical protein FisN_34Hu050 [Fistulifera solaris]) HSP 1 Score: 76.6406 bits (187), Expect = 1.113e-11 Identity = 51/121 (42.15%), Postives = 63/121 (52.07%), Query Frame = 0
Query: 145 RNKSIVMVGDSLTRYQYLNLVNFL-ENGVWGGPD--PQLENEFQWK-GWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWF---------NPACGHQGHNLT 252
RN +I+ +GDSLTRYQYL+LV FL NG W P+ P + E + GW FY T + E CDC+RE IENRYYH+ V + VT+ Q F N HQ H L
Sbjct: 87 RNLNILFMGDSLTRYQYLDLVYFLSHNGTWPSPNDRPNMVMEKTHRNGWTQFYSFTKSALQPYEQCDCFRE--FNLTTLIENRYYHDPVRNNRVTYLQKFGKLPFKSNWNVTEVHQEHRLV 205
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|1210522211|dbj|GAX18973.1| (hypothetical protein FisN_8Hh194 [Fistulifera solaris]) HSP 1 Score: 74.7146 bits (182), Expect = 5.872e-11 Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 0
Query: 145 RNKSIVMVGDSLTRYQYLNLVNFL-ENGVWGGPDPQ----LENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWF 240
RN +I+ +GDSL+RYQYL+LV FL NG W PD LEN + GW+ F+ TNA E CDC+R A + +ENRY+++ + VT+ Q F
Sbjct: 89 RNLNILFMGDSLSRYQYLDLVYFLSHNGTWPSPDETPNMVLENTHK-HGWVQFFNFTNAALRPYEQCDCFRLHSAIKA--VENRYFYDAERNNSVTYLQKF 186
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|929755524|ref|XP_014152744.1| (hypothetical protein SARC_08736 [Sphaeroforma arctica JP610] >gi|906947695|gb|KNC78842.1| hypothetical protein SARC_08736 [Sphaeroforma arctica JP610]) HSP 1 Score: 72.4034 bits (176), Expect = 3.928e-10 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 0
Query: 123 TLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVW-------GGPDPQLENEFQWK-GWLPFYQGTNARFNGREICDCYREEPAERRGNI-ENRYYHNEVLDVWVTFF 237
+L+V D Q + R A+ L+ K IV VGDS RYQY+ ++ +LENG W G P E+ + K GW F++ T G E CDCYR + I ENR+Y+NE ++ +++F
Sbjct: 96 SLLVSECDWQKYT-RRGAIELLQGKHIVFVGDSRLRYQYVCMIFWLENGYWPPDGEKDGFKSPVKESLWGGKGGWRAFFKDTAGYMKGNEYCDCYRNDHDMYVEPIYENRFYYNERYNLRLSYF 218
BLAST of EWM25925.1 vs. NCBI_GenBank
Match: gi|552838638|ref|XP_005849620.1| (hypothetical protein CHLNCDRAFT_143111 [Chlorella variabilis] >gi|307109280|gb|EFN57518.1| hypothetical protein CHLNCDRAFT_143111 [Chlorella variabilis]) HSP 1 Score: 71.2478 bits (173), Expect = 5.911e-10 Identity = 102/398 (25.63%), Postives = 153/398 (38.44%), Query Frame = 0
Query: 102 ATTEANGARNVTGPGAGVAACT--LVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWG--GPDPQLENEFQWKG--------------WLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSG------HWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFF----QRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLC 471
AT + G GAG + LV++ ++ F + A CL + +V +GDSL+RYQYL+LV+FL+ G W P L + QW L + +G+ F R CDC + + E+R Y ++ ++ F W G +GH W + PP L+ P P + G H +E C PG C P W + VV L P ++ N+G H+ P A+ +A++A+EAV G +++TTT P + D DF + + +LDA + P+ A D F+D H + Y LN VLLN LC
Sbjct: 11 ATWSTSDTNTHAGAGAGPPSFLPRLVLERCVLRRFTA-SQARQCLAGRPLVFIGDSLSRYQYLSLVSFLDRGSWPRVSQHPSLVHLHQWGADKMLSGKKSAHKDKKLEYLRGSTDAFGSRMRCDC-----SIAKDWFESRTYEHQKHNITAHFMWWRGWPEGLEGH---WGH----PPFLNATPCH----PSIC--------GMHGEE----------------------------------CPPGQCSPVPDWSMPLPEALRQVVAQLRPAAILLNAGLWRNHFHFQPWPPAFS-RAVARAAVEAVAPQRGMALWRTTT-PSTRFSISRSWD-GDFLGAAASERRLMVLDAWELGRPLLAFDPL--------PFFDRSHPWPEFYTELNTVLLNMLC 338 The following BLAST results are available for this feature:
BLAST of EWM25925.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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