EWM25931.1, cds4738 (CDS) Nannochloropsis gaditana

Overview
NameEWM25931.1
Unique Namecds4738
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:249495..251081 +

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Properties
Property NameValue
Protein idEWM25931.1
Productgcn5-related n-acetyltransferase
Orig transcript idgnl|cribi|Naga_100134g2.9890.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:249495..251081 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008080N-acetyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Homology
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|585107802|gb|EWM25931.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 1071.23 bits (2769), Expect = 0.000e+0
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0
Query:    1 MSLRCYISSRSRRLQSIIVSLLPCLLVTRSVQALVTAPSLRRGPGMAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 528
            MSLRCYISSRSRRLQSIIVSLLPCLLVTRSVQALVTAPSLRRGPGMAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM
Sbjct:    1 MSLRCYISSRSRRLQSIIVSLLPCLLVTRSVQALVTAPSLRRGPGMAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 528          
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|553184921|ref|XP_005854169.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|553185591|ref|XP_005854272.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|422294790|gb|EKU22090.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|422294892|gb|EKU22192.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0
Identity = 475/483 (98.34%), Postives = 475/483 (98.34%), Query Frame = 0
Query:   46 MAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 528
            MAAAYRSPSE AAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIP HTGLSGPSEVEGRETKGR GTAPP PDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGA GWRLQGGWDRG AGFWAGIP ARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAW VGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM
Sbjct:    1 MAAAYRSPSETAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPNHTGLSGPSEVEGRETKGRGGTAPPVPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGAYGWRLQGGWDRGGAGFWAGIPDARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWPVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 483          
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|553196177|ref|XP_005856284.1| (gnat family, partial [Nannochloropsis gaditana CCMP526] >gi|422292762|gb|EKU20064.1| gnat family, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 73.9442 bits (180), Expect = 3.706e-11
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  310 KLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRL 402
            KLYVT + V DAFR +GVA ALL AV+  A   G  Y+CL+ +  N +A RLY  S Y  V  SP    FA  +GL     AA+ Y F Y+++
Sbjct:  112 KLYVTELCVRDAFRGKGVATALLKAVDGIADSLGAAYVCLFCERLNLAASRLYISSNYHEVGHSPSVNKFAGALGL---PTAAKAYGFFYKQI 201          
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|585106739|gb|EWM25101.1| (gnat family [Nannochloropsis gaditana])

HSP 1 Score: 74.7146 bits (182), Expect = 6.318e-11
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  310 KLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRL 402
            KLYVT + V DAFR +GVA ALL AV+  A   G  Y+CL+ +  N +A RLY  S Y  V  SP    FA  +GL     AA+ Y F Y+++
Sbjct:  192 KLYVTELCVRDAFRGKGVATALLKAVDGIADSLGAAYVCLFCERLNLAASRLYISSNYHEVGHSPSVNKFAGALGL---PTAAKAYGFFYKQI 281          
The following BLAST results are available for this feature:
BLAST of EWM25931.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 4
Match NameE-valueIdentityDescription
gi|585107802|gb|EWM25931.1|0.000e+0100.00gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
gi|553184921|ref|XP_005854169.1|0.000e+098.34gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
gi|553196177|ref|XP_005856284.1|3.706e-1145.16gnat family, partial [Nannochloropsis gaditana CCM... [more]
gi|585106739|gb|EWM25101.1|6.318e-1145.16gnat family [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4750rna4750Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications