EWM25941.1, cds4733 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25941.1 vs. NCBI_GenBank
Match: gi|585107813|gb|EWM25941.1| (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana]) HSP 1 Score: 1163.29 bits (3008), Expect = 0.000e+0 Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 0
Query: 1 MRRTLRAMVGLLCFTSISSLGQSQKLLRSTDADSSEDQDTNSMRDSTNTKDQVIVDLDGAFSPTRGADRAEGRAKTPKIRSTVGSPDRPPVAALQFPTVDQDDKRAAIEWDVDTNEVARGYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRLPNATINQLILRMYKPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGFYPTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPLEVEDVHPAKSIVLFLRSILAHGPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEGKPPLVTRYEDYFKNH 556
MRRTLRAMVGLLCFTSISSLGQSQKLLRSTDADSSEDQDTNSMRDSTNTKDQVIVDLDGAFSPTRGADRAEGRAKTPKIRSTVGSPDRPPVAALQFPTVDQDDKRAAIEWDVDTNEVARGYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRLPNATINQLILRMYKPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGFYPTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPLEVEDVHPAKSIVLFLRSILAHGPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEGKPPLVTRYEDYFKNH
Sbjct: 1 MRRTLRAMVGLLCFTSISSLGQSQKLLRSTDADSSEDQDTNSMRDSTNTKDQVIVDLDGAFSPTRGADRAEGRAKTPKIRSTVGSPDRPPVAALQFPTVDQDDKRAAIEWDVDTNEVARGYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRLPNATINQLILRMYKPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGFYPTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPLEVEDVHPAKSIVLFLRSILAHGPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEGKPPLVTRYEDYFKNH 556
BLAST of EWM25941.1 vs. NCBI_GenBank
Match: gi|585112016|gb|EWM29475.1| (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 125.561 bits (314), Expect = 1.658e-27 Identity = 123/472 (26.06%), Postives = 202/472 (42.80%), Query Frame = 0
Query: 123 WPHCYWHAKYAINYTHFGLIDPNAVYWGQLVR-GSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELR-----LPNAT-------------INQLILRMY---KPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDW--LPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIR-VANVGDYEVRYLSMSTADGFY--PTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPL--EVEDVHPAKSIVLFLRSILAH--------GPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEG-KPPLVTRYEDYFKNH 556
+P C W A + L+DPNAVY QL+ + + YK+ FP+ +YFS++ Y+ + P + D + P WG NP+ + T E G YE+Y+T G +G+ NE+R NAT ++ ++LR+Y +P + G ++ P + D+G+ W+ L CS Q+ A G V + ++++ W L ++++ D P + +N + N ++ I P+ A GLF G R V NV +Y RY S + AD F PT +S+ + M+ FY WD +I A + +AC A+FLP E+ + +P + R +LA +S + CG C + F+++ + +QYP L+VY CD G K P V Y+ Y +++
Sbjct: 15 YPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLR--GHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWG------GVDRPVISYTDDLGQ---TWKELQPCSDTT------------RYQFNRAMRQIGWTVY---------------DFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNV----QLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY------GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFV--YQPYRRDY 435
BLAST of EWM25941.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 107.842 bits (268), Expect = 4.133e-21 Identity = 108/417 (25.90%), Postives = 180/417 (43.17%), Query Frame = 0
Query: 161 AYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRL--PNAT--INQLILRMYKPDPILGPSISIIDLE------PPTLYMAHDMGEGKREWRALPRCS----AAKEKLLADLS---NAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLP-PELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADG--FYPTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWS---DQAIFLPLEVEDVHPAKSIVLFLRSILAHGPK----SAGAASKACGNSA-------LCGNPPFIRSIMQEQYPELEVYHCDSCEGKP 543
Y+++G+FP YFS+ VY + + TD ++P G NPF++ + T ++MG YE+Y++ G +GY NE+ P++T L R+ DP G S + E P + H G EW + RCS A E+++ +L N W+ P ++ N T+ F LF + P +A ++ + Y+ +C+ + Y +++I KLP GLF IRVA+ Y+ RY+S ++AD YP+ +I R + Y+ G S WD + + A+ C ++ D + L H + +R +L G K + G A+ N LC + ++QE YP ++++ CD KP
Sbjct: 158 VYRIRGKFPYVRYFSFTVYDASLQSISTLHDTD--IRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPYALLAFRLQLLDPRAGEDRSGKNREWGYVDMPLVEILNHRNG----EWDIIRRCSDEFQARTEEVIENLDLTFNTWW----------------PKNLQIGTECNATE----FSLFDPEQNPIIRRGVAVRNANENYIFWCMPKEIGKKDY---IIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFG-SDWDRMYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLLPGGGKERRGTEGVANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCDYQNLKP 544
BLAST of EWM25941.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 79.7221 bits (195), Expect = 3.611e-12 Identity = 112/445 (25.17%), Postives = 174/445 (39.10%), Query Frame = 0
Query: 125 HCYWHAKYAINYTHFGLIDPNAVYWGQLV-RGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRL----PNATINQLILRMYKPDPILGPSISII--DLEPPTL-YMAHDMGEGKRE-WRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGR-GVIPILREMNCPM-NPTKGNVSFVLFQGDWLPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGFY--PTIASIDGRGMQRFYNYSSAGNSSWD----GWVEIRVALNEAKARACNFWSDQAIFLPL---EVEDVHPAKSIVLFLRSILAHGPKSAGAAS---------KAC----GNSALCGNPPFIRSIMQEQYPELEVYHC 536
+C W A +N+ + D AVY V + G +++G +P YFS+Q Y + S P + D+ +K + G NPF+ P T D G Y+V++T +G++GY NEL NAT ++LR+Y D P + I + PP + Y + G+ W L +C+ K+ + + Y TE + G P CP N + QG N + I LP GL++ VA+ RYLS+ST D P + ++ + FY+ W+ +I A + A A+ C + A+FL +PA L LR IL+ + A+ +AC G A C F S+M+ YP++ Y C
Sbjct: 43 NCAWQASVGLNF-NIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPK-SLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDK-QSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKIASQFIST-IATGYSRVLATENKAGANP------CPTWNSRDQFLDGGGVQG---------------------------------NLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTARVSYPA----LVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 440
BLAST of EWM25941.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 67.781 bits (164), Expect = 2.585e-8 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 125 HCYWHAKYAINYTHFGLIDPNAVYWGQLV-RGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRL----PNATINQLILRMYKPD 252
+C W A +N+ + D AVY V + G +++G +P YFS+Q Y + S P + D+ +K + G NPF+ P T D G Y+V++T +G++GY NEL NAT ++LR+Y D
Sbjct: 189 NCAWQASVGLNF-NIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPK-SLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYD 319
BLAST of EWM25941.1 vs. NCBI_GenBank
Match: gi|585109295|gb|EWM27118.1| (hypothetical protein Naga_100046g25 [Nannochloropsis gaditana]) HSP 1 Score: 65.0846 bits (157), Expect = 2.207e-7 Identity = 92/336 (27.38%), Postives = 144/336 (42.86%), Query Frame = 0
Query: 124 PHCYWHAKYAINYTHFGLIDPN--AVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKP-LWGTNPFSNPDATPEDM--GGYEVYLTPSGEEGYVNELR-LPNATIN---QLILRMYKPDPILGPSISI--------IDLE-------PPTLYM--AHDMGEGKREWRALPRCSAAKE---KLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLPPELAIARQ----SQDSPYMMYCINPYNDWRHYLN---TLL--KIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGFYP 421
P+C W ++ N+ + + P+ ++Y ++ S + + FP + Y S+Q Y +T + Q + D + P G N ++N A E + GGY +Y+T G++ Y NELR LP++ + L R+Y + + GP + DL PP LY AH + +G EWR +P C + KLLA LS W P A + + P K N F+ D RQ S+D+ Y+ P RH N +L ++ LP + L++ VAN DY+VRY+S+S P
Sbjct: 136 PYCAW--RFVGNHDAWNVAFPDMRSLYHVMQIQMSKGDEFKLVAESFPYARYCSYQTYDLRTLMS-HQSLRDVDIVPDANGPNCYANLTAAQEGLRQGGYTLYMTARGDQNYTNELRALPDSIESGQFDLFFRIYVEEALQGPPQAPWGHLPPYGKDLAFEWGWAPPPRLYAKRAH-LKDG--EWREVPFCQYRRRKGFKLLAYLSEIWPAPSPPFAG--------------HPAVAPNKANNVFLPKYTD---------RQGKFASKDANYVASVAEP----RHVRNGSEAMLWARVTGTLPRVPGSLYTPPYVANATDYDVRYVSLSAVHRTIP 438 The following BLAST results are available for this feature:
BLAST of EWM25941.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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