EWM25947.1, cds4725 (CDS) Nannochloropsis gaditana

Overview
NameEWM25947.1
Unique Namecds4725
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:220039..220056 -
Alignment locationCM002464.1:219644..219810 -
Alignment locationCM002464.1:218428..219249 -
Alignment locationCM002464.1:218381..218384 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25947.1
ProductProtein kinase, ATP binding site
Orig transcript idgnl|cribi|Naga_101207g2.817.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:220039..220056 -
CM002464.1supercontigCM002464.1:219644..219810 -
CM002464.1supercontigCM002464.1:218428..219249 -
CM002464.1supercontigCM002464.1:218381..218384 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR017441Protein_kinase_ATP_BS
IPR008271Ser/Thr_kinase_AS
IPR020636Ca/CaM-dep_Ca-dep_prot_Kinase
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|585107823|gb|EWM25947.1| (Protein kinase, ATP binding site [Nannochloropsis gaditana])

HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query:    1 MVQTYELRSYDGVGILRGRDGQIFARVPSACLDTSQNIPRLYKALGRAIKVQLWGLVSLVSSGSGHALPPRGSSPSPLPSDGPSLLPPLQPPSRNTSGGSSHGAKGVWEGSWEEGRRRSSSHGSHSSSVGSVVSNPSPRGQGGRLDGGRGKGGGGGRGGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336
            MVQTYELRSYDGVGILRGRDGQIFARVPSACLDTSQNIPRLYKALGRAIKVQLWGLVSLVSSGSGHALPPRGSSPSPLPSDGPSLLPPLQPPSRNTSGGSSHGAKGVWEGSWEEGRRRSSSHGSHSSSVGSVVSNPSPRGQGGRLDGGRGKGGGGGRGGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG
Sbjct:    1 MVQTYELRSYDGVGILRGRDGQIFARVPSACLDTSQNIPRLYKALGRAIKVQLWGLVSLVSSGSGHALPPRGSSPSPLPSDGPSLLPPLQPPSRNTSGGSSHGAKGVWEGSWEEGRRRSSSHGSHSSSVGSVVSNPSPRGQGGRLDGGRGKGGGGGRGGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|553194838|ref|XP_005856040.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana CCMP526] >gi|422293032|gb|EKU20333.1| serine threonine-protein kinase dclk3 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 245.358 bits (625), Expect = 6.533e-77
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query:  200 MVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKM 322
            MVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKM
Sbjct:    1 MVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKM 123          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|224008024|ref|XP_002292971.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220971097|gb|EED89432.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 213.386 bits (542), Expect = 3.884e-64
Identity = 102/176 (57.95%), Postives = 136/176 (77.27%), Query Frame = 0
Query:  163 RYELCDVIGVGSTSTVHRCVE-RGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSK-MVGGAMAQSFLGTRG 336
            +Y++C+V+GVGSTST HRC+E   GE R  ACKIIDK  ++ +++ +++QF +E+  L++L HPNII+L DV+ TE +IY++MELM GGELFD VV++G+L+EEEAS +VR + SA+ YMHS  +IHRDLKPENLLL+H       +   VKIIDFGLSK MV G +A SFLGTRG
Sbjct:    1 KYDICEVLGVGSTSTCHRCIEITSGESR--ACKIIDKTEIDPKYQTMMDQFYMEIKTLRSLQHPNIIQLYDVYITEDKIYIIMELMNGGELFDYVVQKGTLTEEEASRIVRKVTSALVYMHSKNVIHRDLKPENLLLAHKPRSSHDI--EVKIIDFGLSKIMVDGPVASSFLGTRG 172          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|299471429|emb|CBN79381.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 216.468 bits (550), Expect = 1.324e-63
Identity = 107/181 (59.12%), Postives = 138/181 (76.24%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGA--MAQSFLGTRG 336
            G    +YE+ +V+GVGSTS  +RCV R    +EFACK+IDKR ++ + + LL+QF +E+ VL+ L HPNII +EDVFE++  I+MVME+M+GGELFD VVE+G+LSE EAS +VR + SA+AYMHS+ IIHRDLKPENLLL+  GA P      VKIIDFGL+K++G     AQSFLGTRG
Sbjct:   63 GTVLVKYEMKEVLGVGSTSKCYRCVNRRSR-KEFACKVIDKRAMDPKLKPLLDQFHVEIQVLQLLRHPNIIHMEDVFESDVNIHMVMEIMQGGELFDYVVEKGTLSESEASVIVRKVTSALAYMHSLNIIHRDLKPENLLLTSKGAAP-----EVKIIDFGLAKVLGAGDDRAQSFLGTRG 237          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|698790828|ref|XP_009828446.1| (CAMK/CAMK1 protein kinase, variant 2 [Aphanomyces astaci] >gi|574116225|gb|ETV81709.1| CAMK/CAMK1 protein kinase, variant 2 [Aphanomyces astaci])

HSP 1 Score: 208.379 bits (529), Expect = 1.008e-61
Identity = 100/179 (55.87%), Postives = 133/179 (74.30%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336
            G F  +Y L  VIG GSTS  H C E+  + + FACK+IDKR ++S+   LL+QFQ+E+ VL++LDHPNII +EDV++T+ RI MV ELM GGELFD VV++G+LSE EAS +VR + SAIAYMH+ G++HRDLKPEN+LL+     P      +KIIDFGL+K++  +  +SFLGTRG
Sbjct:   68 GTFENKYALKSVIGNGSTSICHLCEEKATK-KHFACKVIDKRAIQSKSDDLLDQFQVEIQVLQSLDHPNIIHMEDVYQTDTRICMVTELMEGGELFDYVVQKGTLSEVEASCLVRKITSAIAYMHACGVVHRDLKPENVLLT--SPSPNA---EIKIIDFGLAKLLHDSQTRSFLGTRG 240          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|673042437|ref|XP_008875179.1| (CAMK/CAMK1 protein kinase [Aphanomyces invadans] >gi|574469372|gb|ETV96387.1| CAMK/CAMK1 protein kinase [Aphanomyces invadans])

HSP 1 Score: 210.305 bits (534), Expect = 1.381e-61
Identity = 99/179 (55.31%), Postives = 133/179 (74.30%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336
            G F ++Y L  +IG GSTS  H C E     ++FACK+IDKR ++S+   LLEQFQ+E+ VL++LDHPNII +EDV++T+ RI MV ELM GGELFD VV++G+LSE EAS +VR + SA+AYMH+ G++HRDLKPEN+LL+     P      +KIIDFGL+K++  +  +SFLGTRG
Sbjct:   68 GTFESKYTLKAIIGNGSTSVCHLC-EENTTKKQFACKVIDKRAIQSKSDDLLEQFQVEIQVLQSLDHPNIIHMEDVYQTDSRICMVTELMEGGELFDYVVQKGTLSEVEASCLVRKITSALAYMHACGVVHRDLKPENVLLT--SPSPNA---EIKIIDFGLAKLLHNSQTRSFLGTRG 240          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|1173953401|gb|OQS00946.1| (protein kinase [Achlya hypogyna])

HSP 1 Score: 209.149 bits (531), Expect = 2.638e-61
Identity = 101/179 (56.42%), Postives = 134/179 (74.86%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336
            G F ++Y+L  VIG GSTS  H C E+   G+++ACKIIDKR+V+S+   LLEQFQ+E+ VL++L HPNII +EDV++T++RI MV E M GGELFD +V +G+LSE EAS +VR + SA+AYMH+ G++HRDLKPENLLL+     P      VKIIDFGL+K++     +SFLGTRG
Sbjct:   61 GSFDSKYKLLSVIGNGSTSVCHLCEEKAT-GKKYACKIIDKRVVQSKSDDLLEQFQVEIQVLQSLSHPNIIHMEDVYQTDNRISMVTEHMEGGELFDYIVNKGTLSEVEASCLVRKITSALAYMHACGVVHRDLKPENLLLT--SKSPNA---EVKIIDFGLAKLLHDNQTRSFLGTRG 233          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|698790824|ref|XP_009828444.1| (CAMK/CAMK1 protein kinase [Aphanomyces astaci] >gi|574116223|gb|ETV81707.1| CAMK/CAMK1 protein kinase [Aphanomyces astaci])

HSP 1 Score: 209.534 bits (532), Expect = 3.857e-61
Identity = 100/179 (55.87%), Postives = 133/179 (74.30%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336
            G F  +Y L  VIG GSTS  H C E+  + + FACK+IDKR ++S+   LL+QFQ+E+ VL++LDHPNII +EDV++T+ RI MV ELM GGELFD VV++G+LSE EAS +VR + SAIAYMH+ G++HRDLKPEN+LL+     P      +KIIDFGL+K++  +  +SFLGTRG
Sbjct:   68 GTFENKYALKSVIGNGSTSICHLCEEKATK-KHFACKVIDKRAIQSKSDDLLDQFQVEIQVLQSLDHPNIIHMEDVYQTDTRICMVTELMEGGELFDYVVQKGTLSEVEASCLVRKITSAIAYMHACGVVHRDLKPENVLLT--SPSPNA---EIKIIDFGLAKLLHDSQTRSFLGTRG 240          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|698790830|ref|XP_009828447.1| (CAMK/CAMK1 protein kinase, variant 3 [Aphanomyces astaci] >gi|574116226|gb|ETV81710.1| CAMK/CAMK1 protein kinase, variant 3 [Aphanomyces astaci])

HSP 1 Score: 206.453 bits (524), Expect = 5.042e-61
Identity = 99/178 (55.62%), Postives = 132/178 (74.16%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTR 335
            G F  +Y L  VIG GSTS  H C E+  + + FACK+IDKR ++S+   LL+QFQ+E+ VL++LDHPNII +EDV++T+ RI MV ELM GGELFD VV++G+LSE EAS +VR + SAIAYMH+ G++HRDLKPEN+LL+     P      +KIIDFGL+K++  +  +SFLGTR
Sbjct:   68 GTFENKYALKSVIGNGSTSICHLCEEKATK-KHFACKVIDKRAIQSKSDDLLDQFQVEIQVLQSLDHPNIIHMEDVYQTDTRICMVTELMEGGELFDYVVQKGTLSEVEASCLVRKITSAIAYMHACGVVHRDLKPENVLLT--SPSPNA---EIKIIDFGLAKLLHDSQTRSFLGTR 239          
BLAST of EWM25947.1 vs. NCBI_GenBank
Match: gi|669171347|ref|XP_008621022.1| (CAMK/CAMK1 protein kinase [Saprolegnia diclina VS20] >gi|530727324|gb|EQC25566.1| CAMK/CAMK1 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 207.994 bits (528), Expect = 7.003e-61
Identity = 102/179 (56.98%), Postives = 132/179 (73.74%), Query Frame = 0
Query:  158 GGFHARYELCDVIGVGSTSTVHRCVERGGEGREFACKIIDKRMVESRFRGLLEQFQIEVAVLKALDHPNIIRLEDVFETEHRIYMVMELMRGGELFDRVVERGSLSEEEASEVVRALASAIAYMHSMGIIHRDLKPENLLLSHGGAGPGGVGQAVKIIDFGLSKMVGGAMAQSFLGTRG 336
            G F ++Y+L  VIG GSTS  H C E    G ++ACKIIDKR V+S+   LLEQFQ+E+ VL++L HPNII +EDV++T++RI MV ELM GGELFD +V +G+LSE EAS +VR + SA+AYMH+ G++HRDLKPENLLL+     P      VKIIDFGL+K++     +SFLGTRG
Sbjct:   61 GSFDSKYKLLSVIGNGSTSICHLC-EDKATGAKYACKIIDKRAVQSKSDDLLEQFQVEIQVLQSLSHPNIIHMEDVYQTDNRISMVTELMEGGELFDYIVNKGTLSEIEASCLVRKITSALAYMHACGVVHRDLKPENLLLT--SKSPNA---EVKIIDFGLAKLLHDNQTRSFLGTRG 233          
The following BLAST results are available for this feature:
BLAST of EWM25947.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107823|gb|EWM25947.1|0.000e+0100.00Protein kinase, ATP binding site [Nannochloropsis ... [more]
gi|553194838|ref|XP_005856040.1|6.533e-77100.00serine threonine-protein kinase dclk3 [Nannochloro... [more]
gi|224008024|ref|XP_002292971.1|3.884e-6457.95predicted protein, partial [Thalassiosira pseudona... [more]
gi|299471429|emb|CBN79381.1|1.324e-6359.12conserved unknown protein [Ectocarpus siliculosus][more]
gi|698790828|ref|XP_009828446.1|1.008e-6155.87CAMK/CAMK1 protein kinase, variant 2 [Aphanomyces ... [more]
gi|673042437|ref|XP_008875179.1|1.381e-6155.31CAMK/CAMK1 protein kinase [Aphanomyces invadans] >... [more]
gi|1173953401|gb|OQS00946.1|2.638e-6156.42protein kinase [Achlya hypogyna][more]
gi|698790824|ref|XP_009828444.1|3.857e-6155.87CAMK/CAMK1 protein kinase [Aphanomyces astaci] >gi... [more]
gi|698790830|ref|XP_009828447.1|5.042e-6155.62CAMK/CAMK1 protein kinase, variant 3 [Aphanomyces ... [more]
gi|669171347|ref|XP_008621022.1|7.003e-6156.98CAMK/CAMK1 protein kinase [Saprolegnia diclina VS2... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4737rna4737Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications