EWM25950.1, cds4722 (CDS) Nannochloropsis gaditana

Overview
NameEWM25950.1
Unique Namecds4722
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:212406..212541 -
Alignment locationCM002464.1:211885..212207 -
Alignment locationCM002464.1:211564..211695 -
Alignment locationCM002464.1:211411..211431 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25950.1
Productubiquitin-activating enzyme e1
Orig transcript idgnl|cribi|Naga_100665g1.2036.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:212406..212541 -
CM002464.1supercontigCM002464.1:211885..212207 -
CM002464.1supercontigCM002464.1:211564..211695 -
CM002464.1supercontigCM002464.1:211411..211431 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009056catabolic process
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0008641ubiquitin-like modifier activating enzyme activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR009036Molybdenum_cofac_synth_MoeB
IPR016040NAD(P)-bd_dom
IPR000594ThiF_NAD_FAD-bd
IPR000011UBQ/SUMO-activ_enz_E1-like
Homology
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|585107827|gb|EWM25950.1| (ubiquitin-activating enzyme e1 [Nannochloropsis gaditana])

HSP 1 Score: 413.69 bits (1062), Expect = 2.687e-146
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MEEAKMSTGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQPLLLPT 203
            MEEAKMSTGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQPLLLPT
Sbjct:    1 MEEAKMSTGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQPLLLPT 203          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|471911165|emb|CCO27610.1| (ubiquitin-activating enzyme E1 [Rhizoctonia solani AG-1 IB])

HSP 1 Score: 211.846 bits (538), Expect = 1.485e-66
Identity = 102/190 (53.68%), Postives = 134/190 (70.53%), Query Frame = 0
Query:    8 TGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQ 197
            + +E     IDEGLYSRQLYV+GHEA KRM AS+VLIVGV GLG+E+AKN++LAGVKSVTLFDP PV   DL  QF+L E+D+GKPR  A+ PRLAELN YVPV  L    G+ +T + +K +Q + +T+ PL++QL +N  TH  ++ FI++E RGL GS F DFG  F   D + E  +  MI  +++
Sbjct:    2 SAIEIDEAQIDEGLYSRQLYVLGHEAMKRMAASNVLIVGVKGLGVEIAKNIVLAGVKSVTLFDPEPVQVQDLGTQFFLRESDVGKPRAAATLPRLAELNAYVPVKDLGGSPGQEITVDLIKGFQAVILTDVPLSKQLEINDWTHENDVHFISAETRGLFGSAFNDFGPKFTCIDATGEQPLTGMIVEVSK 191          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|729706484|emb|CEI96947.1| (Putative Ubiquitin-activating emzyme E1 [Rhizopus microsporus])

HSP 1 Score: 213.772 bits (543), Expect = 2.004e-64
Identity = 104/192 (54.17%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    6 MSTGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQ 197
            MS  +E   + IDE LYSRQLYV+GHEA K+M  + VLIVG+ GLG+E+AKNV+LAGVKSVTL+DP P    DL+ QFYL+E D+GKPR Q + P+LAELN YVPVH+LE E    LT + +K Y+V+ +T+ PL++QL+++ I H  NI FI++EVRGL G +F DFG  F + D + E  +  MI  I++
Sbjct:    1 MSANIE---QAIDESLYSRQLYVLGHEAMKKMSTAHVLIVGLKGLGVEIAKNVVLAGVKSVTLYDPEPAQISDLSTQFYLTEEDIGKPRAQVTQPKLAELNQYVPVHLLENE----LTEDVLKNYKVVVITDVPLSKQLQISDICHANNIHFISTEVRGLFGRIFNDFGPMFEIMDATGEEPLTGMIAGISK 185          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|913870835|gb|KNZ59966.1| (ubiquitin-activating enzyme E1 [Puccinia sorghi])

HSP 1 Score: 222.631 bits (566), Expect = 7.261e-64
Identity = 106/186 (56.99%), Postives = 136/186 (73.12%), Query Frame = 0
Query:   10 MEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSI 195
            M+     IDE LYSRQLYV+GH+A K+M  SDVLIVG+ GLG+E+AKN+ LAGVKSVT+ DPAP    DL  QF+L ++D+GKPRDQ++ PRLAELN YVPV +LE E    LT +A+K +QV+  TN PL++QL  N  TH   I FI+++VRGL GSVFCDFG  F+V D + E  ++ M+ SI
Sbjct:   16 MQVDQSTIDESLYSRQLYVLGHDAMKKMANSDVLIVGMKGLGVEIAKNICLAGVKSVTIHDPAPTCKADLGTQFFLRDSDIGKPRDQSTQPRLAELNSYVPVRILESE----LTKDALKSFQVVVFTNTPLSKQLEFNDFTHQNGIKFISTDVRGLFGSVFCDFGPEFVVLDATGEQPVSGMVVSI 197          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|909605219|gb|KNE95607.1| (ubiquitin-activating enzyme E1 [Puccinia striiformis f. sp. tritici PST-78])

HSP 1 Score: 220.705 bits (561), Expect = 3.147e-63
Identity = 105/186 (56.45%), Postives = 135/186 (72.58%), Query Frame = 0
Query:   10 MEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSI 195
            ME     IDEGLYSRQLYV+GH+A ++M  SDVLIVG+ GLG+E+AKN+ LAGVKSVT+ DPAP    DL  QF+L ++D+GKPRDQ++ PR+AELN YVPV VL    G+ LT E +K +QV+ +TN PL++QL  N  TH   I FI++  RGL GSVFCDFG  F+V D + E  ++ M+ SI
Sbjct:   16 MELDQSTIDEGLYSRQLYVLGHDAMQKMANSDVLIVGMKGLGVEIAKNICLAGVKSVTIHDPAPTCKADLGCQFFLRDSDIGKPRDQSTQPRMAELNSYVPVRVL----GKELTKEVLKSFQVVVLTNTPLSKQLEFNDFTHQNGIKFISTNSRGLFGSVFCDFGPEFVVLDATGEQPVSGMVVSI 197          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|758358421|emb|CEP19174.1| (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 219.55 bits (558), Expect = 8.519e-63
Identity = 104/183 (56.83%), Postives = 139/183 (75.96%), Query Frame = 0
Query:   15 ENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQ 197
            + IDEGLYSRQLYV+GHEA K+M  + VL+VG+ GLG+E+AKNV+LAGVKSVTL+DPAP    DL+AQFYL+E D+G+PR + + P+LAELN YVPVH+LE E    LT +A+K+Y+V+ VT  P ++QL ++ I H  NI FI++EVRGL G +F DFG  F + D + E  ++ MI SI+Q
Sbjct:   10 QTIDEGLYSRQLYVLGHEAMKKMSVAHVLVVGLKGLGVEIAKNVVLAGVKSVTLWDPAPAEITDLSAQFYLTEQDIGQPRAKVTQPKLAELNQYVPVHLLEGE----LTEDALKKYKVVVVTEMPFSKQLAISKICHANNIHFISTEVRGLFGRIFNDFGSQFEIIDTTGEEPLHGMIASISQ 188          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|727138818|emb|CEG78549.1| (Putative Peptidyl-prolyl cis-trans isomerase [Rhizopus microsporus])

HSP 1 Score: 213.772 bits (543), Expect = 1.461e-62
Identity = 105/192 (54.69%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    6 MSTGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQ 197
            MS  +E   + IDE LYSRQLYV+GHEA K+M  + VLIVG+ GLG+E+AKNV+LAGVKSVTL+DP P    DL+ QFYL+E D+GKPR Q + P+LAELN YVPVH+LE E    LT + +K Y+V+ VT+ PL++QL+++ I H  NI FI++EVRGL G +F DFG  F + D + E  +  MI  I++
Sbjct:    1 MSANIE---QAIDESLYSRQLYVLGHEAMKKMSTAHVLIVGLKGLGVEIAKNVVLAGVKSVTLYDPEPAQISDLSTQFYLTEEDIGKPRAQVTQPKLAELNQYVPVHLLENE----LTEDVLKNYKVVVVTDMPLSKQLQISDICHANNIHFISTEVRGLFGRIFNDFGPMFEIMDATGEEPLTGMIAGISK 185          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|1034742565|gb|OAV96566.1| (hypothetical protein PTTG_01005 [Puccinia triticina 1-1 BBBD Race 1])

HSP 1 Score: 218.779 bits (556), Expect = 2.002e-62
Identity = 103/186 (55.38%), Postives = 134/186 (72.04%), Query Frame = 0
Query:   10 MEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSI 195
            M+     IDE LYSRQLYV+GH+A ++M  SDVLIVG+ GLG+E+AKN+ LAGVKSVT+ DPAP    DL  QF+L ++D+GKPRD ++ PR+AELN YVPV VL    GE LT + +K +QV+  TN PL++QL  N  TH   I FI+++VRGL GSVFCDFG  F+V D + E  ++ M+ SI
Sbjct:   28 MQLDQSTIDESLYSRQLYVLGHDAMQKMANSDVLIVGMKGLGVEIAKNICLAGVKSVTIHDPAPTCQADLGTQFFLRDSDIGKPRDHSTQPRMAELNSYVPVRVL----GEELTKDVLKTFQVVVFTNTPLSKQLEFNDFTHQNGIQFISTDVRGLFGSVFCDFGPEFIVLDTTGEQPVSGMVVSI 209          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|751679448|gb|KIM29611.1| (hypothetical protein M408DRAFT_116287 [Serendipita vermifera MAFF 305830])

HSP 1 Score: 218.009 bits (554), Expect = 2.885e-62
Identity = 109/194 (56.19%), Postives = 137/194 (70.62%), Query Frame = 0
Query:    4 AKMSTGMEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSITQ 197
            A  S+ ME   + IDEGLYSRQLYV+GHEA KRM AS+VLIVG+ GLG+E+AKN+ LAGVKSVT++DP  V   DL +QF+L   D+GKPR  A+  RLAELN YVPVHVL    G+ +T E +K +QV+ +TN PL+ QL++NA TH   + FIA+E RGL GSVF DFG  F   DP+ E  +  MI  I +
Sbjct:    3 ATESSKMEIDEQKIDEGLYSRQLYVLGHEAMKRMAASNVLIVGMQGLGVEIAKNLCLAGVKSVTIYDPDCVQLHDLNSQFFLRPDDVGKPRADATLARLAELNAYVPVHVLHGTEGQQITIEQIKGFQVVVLTNAPLSLQLQINAWTHANGVHFIAAETRGLFGSVFNDFGPRFTCVDPTGEQPLTGMIAEIDK 196          
BLAST of EWM25950.1 vs. NCBI_GenBank
Match: gi|403166235|ref|XP_003326111.2| (ubiquitin-activating enzyme E1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >gi|375166129|gb|EFP81692.2| ubiquitin-activating enzyme E1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3])

HSP 1 Score: 218.009 bits (554), Expect = 4.511e-62
Identity = 103/186 (55.38%), Postives = 135/186 (72.58%), Query Frame = 0
Query:   10 MEPGHENIDEGLYSRQLYVMGHEAQKRMQASDVLIVGVAGLGIEVAKNVILAGVKSVTLFDPAPVAYPDLAAQFYLSEADLGKPRDQASAPRLAELNPYVPVHVLEPEAGEALTAEAVKRYQVLCVTNRPLAEQLRLNAITHPLNIAFIASEVRGLCGSVFCDFGEAFLVSDPSDEPAINAMIGSI 195
            M+     IDE LYSRQLYV+GH+A ++M  SDVLIVG+ GLG+E+AKN+ LAGVKSVT+ DPAP    DL  QF+L ++D+GKPRD ++ PRLAELN YVPV VL    G+ LT + +K +QV+ +TN PL++QL  N  TH   I FI+++VRGL GSVFCDFG  F+V D + E  ++ M+ SI
Sbjct:   71 MQLDQSTIDESLYSRQLYVLGHDAMQKMANSDVLIVGMKGLGVEIAKNICLAGVKSVTIHDPAPTCQADLGTQFFLRDSDIGKPRDHSTQPRLAELNSYVPVRVL----GKELTKDVLKSFQVVVLTNTPLSKQLEFNDFTHQNGIQFISTDVRGLFGSVFCDFGPEFVVLDTTGEQPVSGMVVSI 252          
The following BLAST results are available for this feature:
BLAST of EWM25950.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107827|gb|EWM25950.1|2.687e-146100.00ubiquitin-activating enzyme e1 [Nannochloropsis ga... [more]
gi|471911165|emb|CCO27610.1|1.485e-6653.68ubiquitin-activating enzyme E1 [Rhizoctonia solani... [more]
gi|729706484|emb|CEI96947.1|2.004e-6454.17Putative Ubiquitin-activating emzyme E1 [Rhizopus ... [more]
gi|913870835|gb|KNZ59966.1|7.261e-6456.99ubiquitin-activating enzyme E1 [Puccinia sorghi][more]
gi|909605219|gb|KNE95607.1|3.147e-6356.45ubiquitin-activating enzyme E1 [Puccinia striiform... [more]
gi|758358421|emb|CEP19174.1|8.519e-6356.83hypothetical protein [Parasitella parasitica][more]
gi|727138818|emb|CEG78549.1|1.461e-6254.69Putative Peptidyl-prolyl cis-trans isomerase [Rhiz... [more]
gi|1034742565|gb|OAV96566.1|2.002e-6255.38hypothetical protein PTTG_01005 [Puccinia triticin... [more]
gi|751679448|gb|KIM29611.1|2.885e-6256.19hypothetical protein M408DRAFT_116287 [Serendipita... [more]
gi|403166235|ref|XP_003326111.2|4.511e-6255.38ubiquitin-activating enzyme E1 [Puccinia graminis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4734rna4734Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications