EWM25963.1, cds4711 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|585107848|gb|EWM25963.1| (gdp-mannose -dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query: 1 MHMLPHLFSSSHIRLQPALSPLSFSMEHETGGFDTANMSMPEAVFSPDAQVEYNGAGERRKVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYLV 277
MHMLPHLFSSSHIRLQPALSPLSFSMEHETGGFDTANMSMPEAVFSPDAQVEYNGAGERRKVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYLV
Sbjct: 1 MHMLPHLFSSSHIRLQPALSPLSFSMEHETGGFDTANMSMPEAVFSPDAQVEYNGAGERRKVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYLV 277
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|676383345|ref|XP_009034951.1| (hypothetical protein AURANDRAFT_23507 [Aureococcus anophagefferens] >gi|323454249|gb|EGB10119.1| hypothetical protein AURANDRAFT_23507 [Aureococcus anophagefferens]) HSP 1 Score: 385.956 bits (990), Expect = 1.431e-131 Identity = 179/216 (82.87%), Postives = 199/216 (92.13%), Query Frame = 0
Query: 61 KVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
KVAL+TG+TGQDGSYL EFLLEKGYIVHGIIRRSS+FNT RIEH+YKD HA VR FLHYGDLTDS+NL +IS+++PDEIYNLGAMSHVKVSF+MSEYTA+ DG+GALRLLNA+R+ GLEK+ RLYQASTSELYGKVQ +PQ+ETTPFYPRSPYGVAKQYAYW+LVNYREAY M L NGILFNHESPRRGPTFVTRKITRAV RI++GLQ TLYL
Sbjct: 5 KVALVTGITGQDGSYLTEFLLEKGYIVHGIIRRSSSFNTGRIEHIYKDMHADDVRLFLHYGDLTDSSNLFHIISEVKPDEIYNLGAMSHVKVSFEMSEYTAEADGVGALRLLNAMRSAGLEKSCRLYQASTSELYGKVQAIPQTETTPFYPRSPYGVAKQYAYWMLVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVVRIKRGLQSTLYL 220
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|676396195|ref|XP_009041375.1| (hypothetical protein AURANDRAFT_33270 [Aureococcus anophagefferens] >gi|323448047|gb|EGB03951.1| hypothetical protein AURANDRAFT_33270 [Aureococcus anophagefferens]) HSP 1 Score: 379.793 bits (974), Expect = 5.861e-129 Identity = 178/215 (82.79%), Postives = 195/215 (90.70%), Query Frame = 0
Query: 62 VALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
VAL+TGVTGQDGSYL EFLLEKGY+VHGIIRRSS+FNT RIEH+YKD HA VR FLHYGDLTDS+NL +IS+++PDEIYNLGAMSHVKVSF+MSEYTA+ DGIG LRLLNAVR+ GLEK+ RLYQASTSELYGKVQ +PQ+ETTPFYPRSPYGVAKQYAYW+LVNYREAY M L NGILFNHESPRRGPTFVTRKITRAV RI+ QKTLYL
Sbjct: 17 VALVTGVTGQDGSYLTEFLLEKGYVVHGIIRRSSSFNTGRIEHIYKDMHADDVRLFLHYGDLTDSSNLFHIISEVKPDEIYNLGAMSHVKVSFEMSEYTAEADGIGTLRLLNAVRSAGLEKSCRLYQASTSELYGKVQAIPQTETTPFYPRSPYGVAKQYAYWMLVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVVRIKAQQQKTLYL 231
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|869116029|gb|AKP06418.1| (GDP-D-mannose 4,6-dehydratase [Saccharina japonica]) HSP 1 Score: 378.252 bits (970), Expect = 1.903e-128 Identity = 175/230 (76.09%), Postives = 199/230 (86.52%), Query Frame = 0
Query: 47 PDAQVEYNGAGERRKVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
P+ + GE K A++TG+TGQDGSYL EFLLEKGY VHGIIRRSS+FNT RI+H+Y+DRH + VR LHYGDLTDSTNL +I +++PDEIYNLGAMSHVKVSF+MSEYTA+ DG+G LRLLNA+R+ GLEK TRLYQASTSELYGKVQE+PQ ETTPFYPRSPYGVAKQ+ YW+LVNYREAY M L NGILFNHESPRRGPTFVTRKITRAVARI +G QKT+YL
Sbjct: 4 PEVKKSKVADGETPKKAIITGITGQDGSYLAEFLLEKGYEVHGIIRRSSSFNTQRIDHIYRDRHESAVRLKLHYGDLTDSTNLMHIIYEVQPDEIYNLGAMSHVKVSFEMSEYTAEADGVGVLRLLNAIRSAGLEKKTRLYQASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYL 233
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|1032153204|gb|OAO16564.1| (gdp-d-mannose 4,6-dehydratase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 376.326 bits (965), Expect = 2.881e-127 Identity = 175/223 (78.48%), Postives = 198/223 (88.79%), Query Frame = 0
Query: 54 NGAGERRKVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
+ A +R KVAL+TG+TGQDGSYL E LL KGY VHGIIRRSS+FNT RI HLYKD H GV+FFLHYGDLTDS+NL L+++I+PDEIYNLGA SHVKVSF +SEYTA+VDGIG LRLLNA+R CGLEK TRLYQASTSELYGKVQ +PQ+E TPFYPRSPYGVAKQ++YW++VNYREAY+MFL NGILFNHESPRRGPTFVTRKITRAVARI+ G+Q LYL
Sbjct: 16 SAAEQRAKVALITGITGQDGSYLAELLLSKGYEVHGIIRRSSSFNTGRINHLYKDPHNKGVKFFLHYGDLTDSSNLCGLMAKIQPDEIYNLGAQSHVKVSFDLSEYTAEVDGIGTLRLLNAMRTCGLEKKTRLYQASTSELYGKVQAIPQNEKTPFYPRSPYGVAKQFSYWMIVNYREAYNMFLCNGILFNHESPRRGPTFVTRKITRAVARIKLGVQDCLYL 238
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|299471989|emb|CBN80072.1| (gdp-d-mannose 4,6-dehydratase [Ectocarpus siliculosus]) HSP 1 Score: 373.629 bits (958), Expect = 9.256e-127 Identity = 171/216 (79.17%), Postives = 194/216 (89.81%), Query Frame = 0
Query: 61 KVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
K A++TG+TGQDGSYL EFLLEKGY VHGIIRRSS+FNT RI+H+Y+DRH + VR LHYGDLTDSTNL +I +++PDEIYNLGAMSHVKVSF+MSEYTA+ DG+G LRLLNA+R+ GLEK TRLYQASTSELYGKVQE+PQ ETTPFYPRSPYGVAKQ+ YW+L+NYREAY M L NGILFNHESPRRGPTFVTRKITRAVARI +G QKT+YL
Sbjct: 13 KKAIITGITGQDGSYLAEFLLEKGYEVHGIIRRSSSFNTQRIDHIYRDRHESAVRLKLHYGDLTDSTNLMHIIYEVQPDEIYNLGAMSHVKVSFEMSEYTAEADGVGVLRLLNAIRSAGLEKKTRLYQASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYL 228
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|855302723|ref|XP_012894519.1| (uncharacterized protein [Blastocystis hominis] >gi|300175160|emb|CBK20471.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 373.244 bits (957), Expect = 2.568e-126 Identity = 174/219 (79.45%), Postives = 194/219 (88.58%), Query Frame = 0
Query: 58 ERRKVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
E+RKVAL+TG+TGQDGSYL E LL KGY VHGIIRRSS+FNT RI HLYKD H GVRFFLHYGDLTDS+NL L+++I+PDEIYNLGA SHVKVSF +SEY+A+VDGIG LRLLNA+R CGLEK TRLYQASTSELYGKVQ +PQ+E TPFYPRSPY VAKQ++YWI+VNYREAY MFL NGILFNHESPRRGPTFVTRKITRAV RI+ G+Q LYL
Sbjct: 9 EKRKVALITGITGQDGSYLAELLLSKGYEVHGIIRRSSSFNTGRINHLYKDPHNQGVRFFLHYGDLTDSSNLCGLMAKIQPDEIYNLGAQSHVKVSFDLSEYSAEVDGIGTLRLLNAIRTCGLEKKTRLYQASTSELYGKVQAIPQNEKTPFYPRSPYSVAKQFSYWIVVNYREAYGMFLSNGILFNHESPRRGPTFVTRKITRAVVRIKLGVQDCLYL 227
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|299117431|emb|CBN73934.1| (gdp-d-mannose 4,6-dehydratase [Ectocarpus siliculosus]) HSP 1 Score: 371.318 bits (952), Expect = 5.796e-126 Identity = 170/216 (78.70%), Postives = 193/216 (89.35%), Query Frame = 0
Query: 61 KVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
K A++TG+TGQDGSYL EFLLEKGY VHGIIRRSS+FNT RI+H+Y+DRH + VR LHYGDLTDSTNL +I +++PDEIYNLGAMSHVKVSF+MSEYTA+ DG+G LRLLNA+R+ GLEK TRLYQASTSELYGKVQE+PQ ETTPFYPRSPYGVAKQ+ YW+L+NYREAY M L NGILFNHESPRRGPTFVTRKITRAVARI +G QK +YL
Sbjct: 2 KKAIITGITGQDGSYLAEFLLEKGYEVHGIIRRSSSFNTQRIDHIYRDRHESAVRLKLHYGDLTDSTNLMHIIYEVQPDEIYNLGAMSHVKVSFEMSEYTAEADGVGVLRLLNAIRSAGLEKKTRLYQASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKCIYL 217
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|224001660|ref|XP_002290502.1| (gdp-d-mannose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] >gi|220973924|gb|EED92254.1| gdp-d-mannose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 369.007 bits (946), Expect = 8.151e-125 Identity = 170/216 (78.70%), Postives = 189/216 (87.50%), Query Frame = 0
Query: 61 KVALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
KVAL+TG+TGQDGSYL E LL KGY VHGIIRRSS+FNT RI+H+Y+DRH GV+ FLHYGDL D+TNL +I+ ++PDEIYNLGAMSHVKVSF M EYTAD DG+G LR+L+A+RACGLEK+ R YQASTSELYGKVQEVPQSETTPFYPRSPY VAKQYA+WILVNYREAY M L NGILFNHESPRRG TFVTRKIT AVARI +GL K LYL
Sbjct: 5 KVALITGITGQDGSYLTELLLSKGYTVHGIIRRSSSFNTGRIDHIYRDRHETGVKLFLHYGDLCDATNLITIIANVKPDEIYNLGAMSHVKVSFDMPEYTADCDGVGVLRMLDAIRACGLEKSCRFYQASTSELYGKVQEVPQSETTPFYPRSPYAVAKQYAFWILVNYREAYGMHLTNGILFNHESPRRGATFVTRKITIAVARITEGLDKCLYL 220
BLAST of EWM25963.1 vs. NCBI_GenBank
Match: gi|950884241|ref|XP_014525236.1| (GDP-mannose dehydratase [Blastocystis sp. subtype 4] >gi|902859847|gb|KNB41793.1| GDP-mannose dehydratase [Blastocystis sp. subtype 4]) HSP 1 Score: 365.925 bits (938), Expect = 1.964e-123 Identity = 171/214 (79.91%), Postives = 188/214 (87.85%), Query Frame = 0
Query: 63 ALLTGVTGQDGSYLCEFLLEKGYIVHGIIRRSSTFNTHRIEHLYKDRHAAGVRFFLHYGDLTDSTNLTQLISQIRPDEIYNLGAMSHVKVSFQMSEYTADVDGIGALRLLNAVRACGLEKTTRLYQASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYL 276
AL+TG+TGQDGSYL E LL KGY VHGIIRRSS+FNT RI HLYKD H GV FFLHYGDLTDS+NL L++QI+PDEIYNLGA SHVKVSF +SEY+A+VDGIG LRLLNA+R CGL TRLYQASTSELYGKVQE+PQ ETTPFYPRSPYGVAKQ+A+WI+ NYREAY MFL NGILFNHESPRRGPTFVTRKITRAVARI+ G+Q LYL
Sbjct: 16 ALITGITGQDGSYLAELLLSKGYEVHGIIRRSSSFNTGRINHLYKDPHTQGVNFFLHYGDLTDSSNLCGLMAQIQPDEIYNLGAQSHVKVSFDLSEYSAEVDGIGTLRLLNAIRTCGLANKTRLYQASTSELYGKVQEIPQRETTPFYPRSPYGVAKQFAFWIIKNYREAYGMFLSNGILFNHESPRRGPTFVTRKITRAVARIKLGVQDCLYL 229 The following BLAST results are available for this feature:
BLAST of EWM25963.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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