EWM25975.1, cds4698 (CDS) Nannochloropsis gaditana

Overview
NameEWM25975.1
Unique Namecds4698
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:139246..139524 -
Alignment locationCM002464.1:137839..139113 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25975.1
Productsulfate transporter
Orig transcript idgnl|cribi|Naga_100315g1.5221.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:139246..139524 -
CM002464.1supercontigCM002464.1:137839..139113 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
GO:0008272sulfate transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0008271secondary active sulfate transmembrane transporter activity
GO:0015116sulfate transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR001902Sul_anion_transpt
IPR002645STAS_dom
IPR011547Sulph_transpt
Homology
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|585107871|gb|EWM25975.1| (sulfate transporter [Nannochloropsis gaditana])

HSP 1 Score: 1066.99 bits (2758), Expect = 0.000e+0
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0
Query:    1 MLGINVPSFRYTFQTLRYITFHLSSTNPWELLIGIPVLVLVSGVAAWKKRPPTGTSWDRFGRRLAIALPLLVVLYSTILAYHLYERHHLPIKLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKGLSGPEASMPHVVKTAPHMTSLTVVCACTHVRGHGNTTRDWMPGCQETLGSEGVQRGSAGWTSPTATTIQEMESQRVALPDDNRTDSLASRCLPFQRKRKDGDGREAKKCCHLFIVLDASGINFMDFSGLRALGKVAKDMRDHGVRLLIAQAKSRLQDMLQTAPTLYHDVGGDKIKLSLEDLVYLLERHEMRLHGSLFASTREDGNKPQKVAAGC 517
            MLGINVPSFRYTFQTLRYITFHLSSTNPWELLIGIPVLVLVSGVAAWKKRPPTGTSWDRFGRRLAIALPLLVVLYSTILAYHLYERHHLPIKLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKGLSGPEASMPHVVKTAPHMTSLTVVCACTHVRGHGNTTRDWMPGCQETLGSEGVQRGSAGWTSPTATTIQEMESQRVALPDDNRTDSLASRCLPFQRKRKDGDGREAKKCCHLFIVLDASGINFMDFSGLRALGKVAKDMRDHGVRLLIAQAKSRLQDMLQTAPTLYHDVGGDKIKLSLEDLVYLLERHEMRLHGSLFASTREDGNKPQKVAAGC
Sbjct:    1 MLGINVPSFRYTFQTLRYITFHLSSTNPWELLIGIPVLVLVSGVAAWKKRPPTGTSWDRFGRRLAIALPLLVVLYSTILAYHLYERHHLPIKLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKGLSGPEASMPHVVKTAPHMTSLTVVCACTHVRGHGNTTRDWMPGCQETLGSEGVQRGSAGWTSPTATTIQEMESQRVALPDDNRTDSLASRCLPFQRKRKDGDGREAKKCCHLFIVLDASGINFMDFSGLRALGKVAKDMRDHGVRLLIAQAKSRLQDMLQTAPTLYHDVGGDKIKLSLEDLVYLLERHEMRLHGSLFASTREDGNKPQKVAAGC 517          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|553182326|ref|XP_005853715.1| (sulfate transporter [Nannochloropsis gaditana CCMP526] >gi|422295349|gb|EKU22648.1| sulfate transporter [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 401.364 bits (1030), Expect = 2.347e-136
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0
Query:  117 MVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKGLSGPEASMPHVVKT 317
            MVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRA KRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKGLSGPEASMPHV +T
Sbjct:    1 MVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAAKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKGLSGPEASMPHVPRT 201          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|585107781|gb|EWM25912.1| (sulfate transporter [Nannochloropsis gaditana])

HSP 1 Score: 142.124 bits (357), Expect = 2.835e-32
Identity = 133/456 (29.17%), Postives = 216/456 (47.37%), Query Frame = 0
Query:   62 RRLAIALPLLVVLYSTILAYHLYERHHLPIKLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVT----------GLLLRAAKTMEAEAKGLSGPE------ASMPHVVKTAPHMTSLTVVCACTHVRGHGNTTRDWMPGCQETLGSEGVQRGSAGWTSPTATTIQEMESQRVALP--DDNRTDSLASRCLPFQRKRKDGDGREAKKCCHLF-----------IVLDASGINFMDFSGLRALGKVAKDMRDHGVR---LLIAQAKSRLQDMLQTAPTLYHDVGGDKIKLSLEDLV 485
            R LA A  LL V+ S +L Y + ++        YA    Y V  +QEL ALGL++ VGS FG F     +AR +V  EA  +TQ SALVA ++V++ V +L+ +F+++P+  LAA++  A+      +PF   +R+S  +F V+  T  V   + +D GI  G+ LSI  L+ + S+P L+ LG L G    +R V RY +AV    I ++R+DE+L F +   +            ++L  A +    A GL G +       S  H +  AP  +   ++      +  G          + T   + V+ G     +      Q+ E  R  LP      T+  A   L   +  ++  G E  +   +            IV+D SG+N +D SG++ L +V + ++  G+    L +   KS ++D L+ +P L+  VGG+   LSL  L+
Sbjct:  380 RDLAGASFLLAVI-SFMLTYSVSKK--------YAGLNNYVVEPNQELVALGLADFVGSFFGAFPVAGGFARTAVAVEANQKTQASALVAVSIVLLAVNFLTGSFHWIPLCTLAAIVQVAICGVVDFRPFLYAFRASKSEFAVMFTTFAVTLGLGIDKGIIVGVALSIVALVRKTSHPRLKVLGALPGRRHVFRDVTRYTNAVQAPGICIVRIDESLNFASCASIKEQILSIANDPNVVLPKAASSHHHAFGLGGGQGHVEGKGSGEHGLP-APFRSGSPLLSVVRTFKVGGVAGGAEGGAVELTAKEDAVEEGHVRSQAGDNQGAQDDEGTRKKLPRRRGGGTEGGADGALVVSQDLQEEMGEEDLEVSRVLTAAKVSARPKHIVVDFSGVNHIDLSGIKMLDEVEEALQK-GLPPQILYVVNVKSTVRDRLKKSP-LWDRVGGELCFLSLPALL 823          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|1196102235|ref|WP_086031542.1| (sodium-independent anion transporter [Tenacibaculum holothuriorum] >gi|1190082541|gb|OSY86952.1| sulfate transporter [Tenacibaculum holothuriorum])

HSP 1 Score: 128.642 bits (322), Expect = 3.722e-28
Identity = 73/229 (31.88%), Postives = 131/229 (57.21%), Query Frame = 0
Query:   57 WDRFGRRLAIALPLLVVLYSTILAYHLYERHHLPIKLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDF 285
            +D  G  + IA+ L++V Y   ++           K   A +  Y +  +QEL ALGLSNM GS F  + + SS++R+++N EAG +T MS+LV+  +VI+ + +L+P FY++P + LAA++  A+ +  +V+     ++++  DF++L+AT I   V  ++ GI +G+GLS+  L+ + S P + ELG++  +   +R   R+   +    + V R D  L + N  +
Sbjct:  248 FDLIGELMPIAITLVMVGYLETISIG---------KSLEAKQDEYRINPNQELIALGLSNMAGSLFKAYPSTSSFSRSAINEEAGAKTGMSSLVSVAIVILTLLFLTPVFYHLPKTVLAAIIIVAVFNLISVREAVRLFKANNLDFWLLLATFIATLVFGIEYGILAGVGLSLVVLIFRTSRPYVTELGKVPNS-DFYRNKNRFEDVLVEEEVLVFRFDAQLFYANSSY 466          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|1134211718|ref|WP_076453730.1| (hypothetical protein [Zobellia uliginosa] >gi|1132016484|emb|SIS43327.1| sulfate permease, SulP family [Zobellia uliginosa])

HSP 1 Score: 127.102 bits (318), Expect = 1.281e-27
Identity = 60/196 (30.61%), Postives = 119/196 (60.71%), Query Frame = 0
Query:   98 KGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRA 293
            K RY++  +QEL ALG++ + GS F    +  S+ R+++N+E+G +TQ+S+++ +  V +V+ + +P FYY+P + LAA++  ++V  F  +  F  +++   DF++L+ + I+  VV +  G+++GI LSI  ++ + + PD+  LG+L      +R + RY  A   +N +++R +  L F N D++   ++  
Sbjct:  284 KNRYKIDANQELFALGIAKIGGSFFQALPSSGSFTRSAINHESGAKTQISSIITALFVTLVLLFFTPLFYYLPQAILAAIILVSVVGLFEYKEAFSLWKTHRSDFYMLLTSFILTLVVGIKEGVFAGIFLSIIVVVYRLAKPDILVLGKLPNT-SHFRCIHRYPEAEQVKNCKIIRFNGQLFFANSDYLKDFIVNV 478          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|639784810|ref|WP_024741522.1| (sodium-independent anion transporter [Tenacibaculum maritimum])

HSP 1 Score: 125.561 bits (314), Expect = 4.323e-27
Identity = 62/188 (32.98%), Postives = 116/188 (61.70%), Query Frame = 0
Query:   98 KGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDF 285
            +  Y +  +QEL ALGLSNM+GS F  + + SS++R+++N E+GG+T MSAL++  +V++ + +L+P FY++P + LAA++  A+ +   ++     + ++  DF++L+AT +    + V+ GI  G+GLSI  L+ + S P + ELG++  +   +R   R++  +   +I + R D  L + N  +
Sbjct:  280 QDEYRIHPNQELVALGLSNMIGSLFKAYPSTSSFSRSAINQESGGKTGMSALISVVMVVITLLFLTPVFYHLPKAVLAAIIIVAVFNLINIKEARFLWSANNLDFWLLIATFLATLFLGVEYGILIGVGLSIIVLIYRTSRPYVTELGKVPNS-DFYRNRNRFKEVIIEEDILIFRFDAQLFYANSSY 466          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|490706406|ref|WP_004569745.1| (sodium-independent anion transporter [Polaribacter irgensii] >gi|88782770|gb|EAR13947.1| sulfate transporter [Polaribacter irgensii 23-P])

HSP 1 Score: 122.865 bits (307), Expect = 2.940e-26
Identity = 73/230 (31.74%), Postives = 133/230 (57.83%), Query Frame = 0
Query:   58 DRFGRRLAIALPLLVVLYSTILAYHLYERHHLPIKLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVS--SFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDF 285
            +R    L IAL L++V Y   ++           KL  A +  Y +  +QEL ALGLSNM GS F  + + SS++R+++N E+G +T M+AL++  +V + + +L+P FYY+P + LAA++  A++   +FT   F   ++++  DF++L+ T +    + ++ GI +G+ LS+  L+ + S P + ELGR+  +   +R ++R+   +   +I +LR D  L + N  +
Sbjct:  249 ERIRELLPIALTLVMVGYLETISIG---------KLLEAKQDVYRIRPNQELIALGLSNMFGSLFKAYPSASSFSRSAINEESGAKTGMAALISVLMVAITLLFLTPLFYYLPKTILAAIIIVAVLGLVNFTEAKFL--WKANQLDFWLLLVTFLATLFLGIEYGISAGVSLSLVVLVFRTSRPHIAELGRVPNS-NFYRNIERFEEVIVDEDILILRFDAQLFYANSSY 466          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|1119635694|ref|WP_072556718.1| (sodium-independent anion transporter [Tenacibaculum sp. LPB0136] >gi|1110851876|gb|APG66195.1| sodium-independent anion transporter [Tenacibaculum sp. LPB0136])

HSP 1 Score: 122.479 bits (306), Expect = 4.037e-26
Identity = 62/190 (32.63%), Postives = 111/190 (58.42%), Query Frame = 0
Query:   96 AHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDF 285
            A +  Y V  +QEL ALGLSNM GS F  +   SS++R+++N E GG T MSA+V+  ++++ + +L+P FYY+P + LAA++  A+      +     ++++  DF++++AT +      V+ GI +G+GLS+  L+ + S P + ELG++  +   ++   R+   V   ++ V R D  L + N  +
Sbjct:  278 AKQNEYRVNANQELIALGLSNMAGSLFKAYPTTSSFSRSAINQENGGTTGMSAIVSVIMIVISLLFLTPVFYYLPKTVLAAIIIVAVFGLINFKEAAYLWKANNLDFWLMMATFLATLFFGVEYGIITGVGLSLIILIFRTSRPYVTELGKVPNS-NFYKNKNRFEEVVIDEDVLVFRFDAQLFYANSSY 466          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|655510271|ref|WP_028891344.1| (sodium-independent anion transporter [Tenacibaculum sp. 47A_GOM-205m])

HSP 1 Score: 122.479 bits (306), Expect = 4.500e-26
Identity = 64/190 (33.68%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   96 AHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDF 285
            A +  Y V  +QEL ALGLSNMVGS F  + + SS++R+++N E+GG T +SA+V++ LV++ + +L+P FY++P + L+A++  A+ +   VQ     ++++  DF++L+AT +      ++ GI  G+ LS+  L+ + S P + ELG++  +   +R   R++  +    I V R D  L + N ++
Sbjct:  279 AKQDEYRVRPNQELVALGLSNMVGSLFQSYPSASSFSRSAINAESGGTTGVSAIVSALLVVITLLFLTPVFYHLPKTILSAIIIVAVFNLINVQEARRLWKANNLDFWLLLATFLATIFFGIEYGILIGVVLSLIVLIFRTSRPYVAELGKVPNS-DFYRNKNRFKEVIIEEEILVFRFDAQLFYANSNY 467          
BLAST of EWM25975.1 vs. NCBI_GenBank
Match: gi|1101197030|gb|OIP47913.1| (sodium-independent anion transporter [Flavobacteriaceae bacterium CG2_30_31_66])

HSP 1 Score: 122.094 bits (305), Expect = 6.493e-26
Identity = 69/212 (32.55%), Postives = 119/212 (56.13%), Query Frame = 0
Query:   92 KLSYAHKGRYEVGVDQELSALGLSNMVGSCFGGFVAVSSYARASVNYEAGGRTQMSALVASTLVIVVVQWLSPAFYYVPMSGLAALLCGALVSSFTVQPFFETYRSSPRDFFVLVATSIVMFVVSVDTGIYSGIGLSICNLLLQYSYPDLEELGRLSGAPGKWRAVKRYRHAVTPRNIRVLRLDEALTFVNGDFVTGLLLRAAKTMEAEAKG 303
            K   + +  Y+V  +QEL ALGLSNMVGS F      SS++R+++N E+G +T M+A ++  +V + + +L+P FY++P + LAA++  A+ S   ++     +R++  DF++L++T I      ++ GI  G+GLS+  L+ + S P + ELG++  A   +R  +R+   +   +I V R D  L + N  +      R      AE KG
Sbjct:  274 KFQESKQDEYKVRPNQELIALGLSNMVGSLFKTIPIASSFSRSAINQESGAKTGMAAFISVVMVTITLLFLTPLFYFLPKTILAAIIIVAVFSLVNIKEAAFLWRANNLDFWLLISTFIATLFFGIEYGIAVGVGLSLVVLIFRTSRPYVVELGKVPDA-NFYRNKERFEDVIIENDILVFRFDAQLFYANSSY-----FRDKMDEMAEKKG 479          
The following BLAST results are available for this feature:
BLAST of EWM25975.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107871|gb|EWM25975.1|0.000e+0100.00sulfate transporter [Nannochloropsis gaditana][more]
gi|553182326|ref|XP_005853715.1|2.347e-13698.51sulfate transporter [Nannochloropsis gaditana CCMP... [more]
gi|585107781|gb|EWM25912.1|2.835e-3229.17sulfate transporter [Nannochloropsis gaditana][more]
gi|1196102235|ref|WP_086031542.1|3.722e-2831.88sodium-independent anion transporter [Tenacibaculu... [more]
gi|1134211718|ref|WP_076453730.1|1.281e-2730.61hypothetical protein [Zobellia uliginosa] >gi|1132... [more]
gi|639784810|ref|WP_024741522.1|4.323e-2732.98sodium-independent anion transporter [Tenacibaculu... [more]
gi|490706406|ref|WP_004569745.1|2.940e-2631.74sodium-independent anion transporter [Polaribacter... [more]
gi|1119635694|ref|WP_072556718.1|4.037e-2632.63sodium-independent anion transporter [Tenacibaculu... [more]
gi|655510271|ref|WP_028891344.1|4.500e-2633.68sodium-independent anion transporter [Tenacibaculu... [more]
gi|1101197030|gb|OIP47913.1|6.493e-2632.55sodium-independent anion transporter [Flavobacteri... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4710rna4710Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications