EWM25987.1, cds4684 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|585107888|gb|EWM25987.1| (hypothetical protein Naga_100151g10 [Nannochloropsis gaditana]) HSP 1 Score: 894.034 bits (2309), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query: 1 MVLTASDKCCHKTRHPLSYSYWTEDPSLLQRYTGISSPLIINIHHLSLLNNSLLTLVDRVCRSHGPQEMVKSKNQQAVQATSSLLLPWGPAILLFSCVIPAHASSSIISDRRPLAASNLRFPDRPKALPPLLKASLRTVLPPFSRARRKKFTFPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEIVEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVVAEDKE 437
MVLTASDKCCHKTRHPLSYSYWTEDPSLLQRYTGISSPLIINIHHLSLLNNSLLTLVDRVCRSHGPQEMVKSKNQQAVQATSSLLLPWGPAILLFSCVIPAHASSSIISDRRPLAASNLRFPDRPKALPPLLKASLRTVLPPFSRARRKKFTFPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEIVEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVVAEDKE
Sbjct: 1 MVLTASDKCCHKTRHPLSYSYWTEDPSLLQRYTGISSPLIINIHHLSLLNNSLLTLVDRVCRSHGPQEMVKSKNQQAVQATSSLLLPWGPAILLFSCVIPAHASSSIISDRRPLAASNLRFPDRPKALPPLLKASLRTVLPPFSRARRKKFTFPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEIVEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVVAEDKE 437
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|553188706|ref|XP_005854849.1| (adhesin-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294216|gb|EKU21516.1| adhesin-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 384.8 bits (987), Expect = 1.134e-117 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 69 MVKSKNQQAVQATSSLLLPWGPAILLFSCVIPAHASSSIISDRRPLAASNLRFPDRPKALPPLLKASLRTVLPPFSRARRKKFTFPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYR 246
MVKSKNQQAVQATSSLLLPWGPAILLFSCVIPAHASSSIISDRRPLAASNLRFPDRPKALPPLLKASLRTVLPPFSRARRKKFTFPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYR
Sbjct: 1 MVKSKNQQAVQATSSLLLPWGPAILLFSCVIPAHASSSIISDRRPLAASNLRFPDRPKALPPLLKASLRTVLPPFSRARRKKFTFPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYR 178
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|298714009|emb|CBJ27241.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 121.709 bits (304), Expect = 5.744e-28 Identity = 78/244 (31.97%), Postives = 126/244 (51.64%), Query Frame = 0
Query: 199 EEDAAWLTNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEIVEASPLHP--YECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLL--LASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTV-VAEDKE 437
E+ W+ +Q+ YQ AL + L ++ G+K E P ++ A +CR++ E ++G K+VAPC C+GT KW+ F+ +N RR++ + C TC IDY Y+ +G + VS L+++ R + LA+ V L L +L++RVLTS + W+ + +V PLPL+I+ +++ L E VR++L + ES +LE LPVTV V ED +
Sbjct: 44 EKAVEWMMHQLCMYQTRTALISNPLAEK-----------GYKLREIVPSPRGLLCAVSTEERRMDCRMYVEAEVGKKVVAPCKCKGTQKWISFSALNSERRKEAAKWKNCPTCQGPIDYALYEAYGGGAGKAVSAILNNSRATRVAIGVLATMVLW--LLSPLLHVLIVRVLTSGVLWKNYHRLTFIVNLPLPLQIMGIRFLMTWTNDQLLLVESMVRQSLTDIESRILESRLPVTVEVREDGD 274
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|873229953|emb|CEM11818.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 84.7297 bits (208), Expect = 3.696e-14 Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 0
Query: 259 PYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPV 429
P C I+ E + G K+ P +GT KW+ F+ +N+ RR+DP R+ +D+ S A VS LD + L++ S + + L +++R+L S L+WR + LW+R +Y P KI++ ++V VR+ L + ES LL+ +LPV
Sbjct: 197 PKSCLINIEAEEGTKVAGP---KGTDKWVTFSQLNKYRRKDPQKLRDLWYGQYDVDFGPINELASTQALAVSAMLDSPVLIPSLVILSIAGALGVSAGALWAVLVRLLNSHLWWRSYGLWSRFLYVSAPFKILLGRWVYSSCRDVVKALADVVRDRLLDLESHLLQASLPV 364
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|223998522|ref|XP_002288934.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976042|gb|EED94370.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.7962 bits (190), Expect = 4.422e-12 Identity = 77/288 (26.74%), Postives = 122/288 (42.36%), Query Frame = 0
Query: 171 SLLACRGGST---GATPAQASTSPRNRTSEWEEDAAWL----TNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEIVE-----ASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKI---------DYQAYQRFGSVLAQLVSWPLD--HALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLW----SYFLRAEGAVRETLAEAESILLERALPVTV 431
+LL+ RGGS+ + R + +++ + L T Q L YQ +E L R V P G E + P E+V+ + P C + + K+VAP GT +W+ + +NR RR DP I +Y Q G + S LD + + R LL+ + + + VL + L ++ R++ S+ FW Q W R+ PLK+++ GQL W S F + E VRE + E +LE ++P+TV
Sbjct: 67 TLLSIRGGSSLTQDENDNEGKEDAEVRKKQLQQEQSKLLKYRTEQQLLYQLRSTYLSEMLASRGVPV---PTVLGVATAEGNKVP-EMVDWDCAMCTYDEPKSCLYSFDAEPNTKVVAPI---GTDQWISLSALNRLRRTDPTKVEPMWHSRYAILQSWFSDTSEYSMLQYVGFKGFVISSVLLDGGNGMILRSLLILTVLSALVLVMPLLEFIIGRIIVSAPFWAQWQTWGRIARAGFPLKLLL----GQLAWKGIASSFGKMESEVREFFVDMECEILEESVPLTV 343
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|1210526022|dbj|GAX14940.1| (hypothetical protein FisN_12Lh357 [Fistulifera solaris]) HSP 1 Score: 72.4034 bits (176), Expect = 2.353e-10 Identity = 63/241 (26.14%), Postives = 106/241 (43.98%), Query Frame = 0
Query: 213 QAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEI----VEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKI----------DYQAYQRF---GSVLAQLVSWPL--DHALTFRC--LLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVV 432
Q + L + +L R A++ +F +H E + + A+ HP C + + G+K++AP T +W+ + +NR RR DP I Y Y G+ L+ L+ PL ++ C L LA+F F L+ R+LTS + W + WAR LPLK+++ + + L + F + G +R L E E LLE+++P+T++
Sbjct: 84 QQQLYLQSRSLQLRQALIQRGVLEF--QHTESSQVAQNVDWDCALATADHPKSCLFSFDAEEGSKVIAPI---DTQQWITLSALNRLRRNDPTKVEPLWHSQYNILQTWFHPNKSPYSLYTHLSPVGTFLSCLLDAPLLLGASMILACTFLFLATFPF--------WEWLIKRILTSHIMWINYHQWARFTRAALPLKLLLGQMAWKGLANVFGQIYGKIRTYLVEIECQLLEQSIPLTIL 311
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|219126665|ref|XP_002183572.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404809|gb|EEC44754.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 70.0922 bits (170), Expect = 1.458e-9 Identity = 78/295 (26.44%), Postives = 124/295 (42.03%), Query Frame = 0
Query: 153 FPGADSLLPSTSCSFPVPSLLACRGGSTGATPAQASTSPRNRTSEWEEDAAWLTNQVLTYQAHMALSAEAL-GKRHAVVGHTPFDFGFKHEEKYRPPLE--IVEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQ--------RFGSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLW----SYFLRAEGAVRETLAEAESILLERALPVTVV 432
F A S S S + P L RGG+ T + A++ ++ +A+ T Q L Q+ L +AL G+ + H +K P++ A+ HP C + + GAK++AP T W+ A +NR RR DP I + + + L VS+ LD L LL + S+++ + L ++T + W+Q W R V+ LPLK+++ GQ+ W F R G VR L + E +LE +PVT++
Sbjct: 23 FGAAHSRTSSLSVNLP---LRLARGGALKTTTSTANSK--------DDVSAYRTRQQLYLQSRSLLLRQALIGRGLDALDHDAGGGDEGGAKKRAKPVDWDCAVATEAHPKSCLYSFDAETGAKVLAPL---DTTHWITLAALNRLRRTDPTKVEPLWHSQYNILSTWWHPSHVFSLYTYLTPLGAFVSFLLDSPLLLASTLLGFVLLSALVTLPVWEHLAQIIVTHPVIWQQWPSWGRFVHAALPLKLLL----GQMAWKAVAQVFGRLYGRVRTHLIDWECQILETCIPVTIL 299
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|1210517522|dbj|GAX23779.1| (hypothetical protein FisN_12Hh357 [Fistulifera solaris]) HSP 1 Score: 65.4698 bits (158), Expect = 4.824e-8 Identity = 54/193 (27.98%), Postives = 87/193 (45.08%), Query Frame = 0
Query: 254 ASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKI----------DYQAYQRF---GSVLAQLVSWPLDHALTFRCLLLASFVFSSVLFVQPL-SILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTVV 432
A+ +P C + + G K++AP T +W+ + +NR RR DP I Y Y G+ L+ L+ PL T +L +F+F + P L+ R+LTS + W + WAR LPLK+++ + + L + F + G +R L E E LE+A+P+T+V
Sbjct: 143 ATAENPKSCLFSFDAEEGCKVIAPI---DTQQWITLSALNRLRRNDPTKVEPLWHSQYNILQTWFHPNKSPYSLYTHLSPVGTFLSCLLDAPLLLGATI--ILACTFLFLATF---PFWEWLIKRILTSHIMWINYHQWARFTRAALPLKLLLGQMAWKGLANVFGQIYGKIRTYLVEIECQQLEQAIPLTIV 327
BLAST of EWM25987.1 vs. NCBI_GenBank
Match: gi|397633762|gb|EJK71120.1| (hypothetical protein THAOC_07470, partial [Thalassiosira oceanica]) HSP 1 Score: 64.3142 bits (155), Expect = 1.685e-7 Identity = 64/256 (25.00%), Postives = 105/256 (41.02%), Query Frame = 0
Query: 206 TNQVLTYQAHMALSAEALGKRHAVVGHTPFDFGFKHEEKYRPPLEI----VEASPLHPYECRIHGEVDLGAKLVAPCLCRGTGKWMWFADMNRRRRRDPLSSRECGTCHAKIDYQAYQRFGSVLAQLVSWPLDHALTFRCLL---LASFVFSSVL-----------------------FVQPLSILVIRVLTSSLFWRQHSLWARVVYGPLPLKIVMYKYVGQLLWSYFLRAEGAVRETLAEAESILLERALPVTV 431
T+Q L YQ E L R + P + +PP ++ ++ P C + + K+VAP GT +W+ +NR RR DP K++ + ++G L SW D + F L + F SSVL F+ + V R+L S+ FW + + W R+ PLK+++ +YV + + F + E VRE + + E +LE ++P+TV
Sbjct: 241 TDQQLLYQLRSTYLTEMLAARGVPL---PTIISVSTPDGEKPPEKVDWDCALSTDEEPKSCLYSFDAEPDTKVVAPL---GTDQWISLTALNRLRRTDP----------TKVEPMWHSQYGV----LQSWFADSS-EFSLLQHVGIKGFFVSSVLLDGGNGMALRSLLVLSVLSLLILFMPLIEYTVQRILVSAPFWNRWTFWGRIARAGFPLKLLIGQYVWKAVALAFRKLENEVREFVVDLECEILEDSVPITV 475 The following BLAST results are available for this feature:
BLAST of EWM25987.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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