EWM25981.1, cds4682 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|585107882|gb|EWM25981.1| (endoglucanase a [Nannochloropsis gaditana]) HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 Query: 1 MKGRMRNIIMLVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHGTEAVGVRTGERGGEGPRAVDSRILGVLARSDPSAVFSPILSSPWFFPPSRHLLDAVRHSCHSPHGRVPSMVPLSRHRRPPRLASRPGSPHRQCHGDRQLQGGESIWQPALAGFRAERVDVFRCHCPPFFID 301 MKGRMRNIIMLVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHGTEAVGVRTGERGGEGPRAVDSRILGVLARSDPSAVFSPILSSPWFFPPSRHLLDAVRHSCHSPHGRVPSMVPLSRHRRPPRLASRPGSPHRQCHGDRQLQGGESIWQPALAGFRAERVDVFRCHCPPFFID Sbjct: 1 MKGRMRNIIMLVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHGTEAVGVRTGERGGEGPRAVDSRILGVLARSDPSAVFSPILSSPWFFPPSRHLLDAVRHSCHSPHGRVPSMVPLSRHRRPPRLASRPGSPHRQCHGDRQLQGGESIWQPALAGFRAERVDVFRCHCPPFFID 301
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|917371914|ref|WP_051978626.1| (hypothetical protein [Edaphobacter aggregans]) HSP 1 Score: 102.834 bits (255), Expect = 8.955e-23 Identity = 61/148 (41.22%), Postives = 81/148 (54.73%), Query Frame = 0 Query: 26 YGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQV---PIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHG 170 Y +P+ D+K + PQ IPG V A++D+GG+ VAYH D VNHGS ELNP D Y + FR E SYTK N DR N + P +Q+Y GW G W +S+ V G YT L TSN GG++ + V+ + + G Sbjct: 5 YKGAPYLDDKQRVPQTIPGVVECAFYDKGGEGVAYHDTDPVNHGSGELNPA---DGSYLHEFRMHEAVDISYTKFNNS---PDRTDDNPWTIVLPPANQLYVGWTEPGEWFNISVDVHHAGTYTADLLYTSNRGGSISIDVNGHPASG 146
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|959928013|ref|WP_058186623.1| (hypothetical protein [Terracidiphilus gabretensis]) HSP 1 Score: 97.4413 bits (241), Expect = 1.506e-20 Identity = 55/153 (35.95%), Postives = 78/153 (50.98%), Query Frame = 0 Query: 13 MASCQIGAGIQSLYGTSPFADEKMQ-GPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 M + QS Y +P+ D + Q GPQ IPG+V+ A++D GG+ +AYH D+ NHGS ELNP D Y + FR EG TS+ K D + + P D +Y GW G W +++ + YT TSN G T+ + V+ Sbjct: 1 MTAAAHPQSFQSQYKGTPYGDSRYQDGPQKIPGRVFCAYYDLGGEGIAYHDIDEKNHGSGELNPA---DGTYLHEFRMHEGVDTSFVKFDRKPDQVDDNPYDRALPPRDMLYVGWTEPGEWFNITVNAAKTETYTADFLYTSNRGATISIDVN 150
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|499843138|ref|WP_011523872.1| (hypothetical protein [Candidatus Koribacter versatilis] >gi|94552147|gb|ABF42071.1| hypothetical protein Acid345_3070 [Candidatus Koribacter versatilis Ellin345]) HSP 1 Score: 95.5153 bits (236), Expect = 8.462e-20 Identity = 64/163 (39.26%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 8 IIMLVMASCQIGAGI-----QSLYGTSPFADEKMQ-GPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 I +A+ I A + S Y SP+ D + Q G Q IPGKV+ A++D GG+ VAYH D NHGS ELNP D Y N FR EG SYTK D N P D Y GW W V++ V + G Y TSN GGT+ + V+ Sbjct: 6 FISFFVAASMIPATLFSQSPSSEYQGSPYHDSRYQAGAQKIPGKVFCAYYDLGGEGVAYHDTDPQNHGSGELNPA---DGSYLNEFRIHEGVDISYTKFNRKPNLIDDNPFNKVVPPADLPYVGWTEPSEWFNVTVEVAQTGTYAADFLYTSNRGGTISIDVN 165
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1110563584|emb|SHG66032.1| (Carbohydrate binding module (family 6) [Chryseolinea serpens]) HSP 1 Score: 95.1301 bits (235), Expect = 1.048e-19 Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0 Query: 40 QNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 Q+IPG+V ++D GG+ VAYH D VN+GS +LNP G Y N FR +EG SYTK G D N +DQ+Y GW G W+ +L ++E G YTV L TS+ GT+ L +D Sbjct: 33 QSIPGRVQCEFYDEGGEGVAYHDADAVNNGSGKLNPANG---TYLNEFRMNEGVDISYTK----GKDIDNNPYNTVAPEMDQLYVGWTQPGEWIHYTLQIKEAGTYTVGLMYTSHDDGTIALDLD 150
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1180652749|ref|WP_084137936.1| (hypothetical protein [Chryseolinea serpens]) HSP 1 Score: 94.7449 bits (234), Expect = 1.127e-19 Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0 Query: 40 QNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 Q+IPG+V ++D GG+ VAYH D VN+GS +LNP G Y N FR +EG SYTK G D N +DQ+Y GW G W+ +L ++E G YTV L TS+ GT+ L +D Sbjct: 26 QSIPGRVQCEFYDEGGEGVAYHDADAVNNGSGKLNPANG---TYLNEFRMNEGVDISYTK----GKDIDNNPYNTVAPEMDQLYVGWTQPGEWIHYTLQIKEAGTYTVGLMYTSHDDGTIALDLD 143
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|557347130|gb|ESQ86709.1| (hypothetical protein ABAC460_22545 [Asticcacaulis sp. AC460]) HSP 1 Score: 96.6709 bits (239), Expect = 9.721e-19 Identity = 61/163 (37.42%), Postives = 82/163 (50.31%), Query Frame = 0 Query: 4 RMRNIIMLVMASCQI-GAGIQSLYGTSPFADEKMQG-PQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 R+ +++ VM++ G + + F D + G Q IPG V A++D GG+ VAYH D VNHGS LNP +D Y + FR EG S+TK N D N P DQ+Y GW G W +++ V GDY L TS GGT+ + VD Sbjct: 10 RLAWLLVAVMSAFAAPGFAVGADRAGIAFGDSRYTGGAQEIPGTVHAAYYDAGGEGVAYHDTDSVNHGSGALNP---LDGSYLHAFRAGEGVDISFTKFGNPSVAVDDSPFNRVVPPADQLYVGWTEPGEWFNLTVDVAHDGDYVGDLLYTSQRGGTIAIDVD 169
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1175168768|ref|WP_081716689.1| (hypothetical protein [Asticcacaulis sp. AC460]) HSP 1 Score: 96.2857 bits (238), Expect = 1.372e-18 Identity = 57/135 (42.22%), Postives = 70/135 (51.85%), Query Frame = 0 Query: 31 FADEKMQG-PQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 F D + G Q IPG V A++D GG+ VAYH D VNHGS LNP +D Y + FR EG S+TK N D N P DQ+Y GW G W +++ V GDY L TS GGT+ + VD Sbjct: 20 FGDSRYTGGAQEIPGTVHAAYYDAGGEGVAYHDTDSVNHGSGALNP---LDGSYLHAFRAGEGVDISFTKFGNPSVAVDDSPFNRVVPPADQLYVGWTEPGEWFNLTVDVAHDGDYVGDLLYTSQRGGTIAIDVD 151
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1113279098|gb|OJV44199.1| (hypothetical protein BGO25_10605 [Acidobacteriales bacterium 59-55]) HSP 1 Score: 90.8929 bits (224), Expect = 3.583e-18 Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 0 Query: 26 YGTSPFADEKM-QGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHG 170 Y +P+ D+ G Q+IPG+V A +DRGG+ VAYH + N GS LNP D Y N FR DEG SYTK N D + Q P Q+Y GW G W V++ G Y+ L TSN GG + + ++ A+ G Sbjct: 15 YKGTPYKDDHHPNGAQSIPGRVECALYDRGGEGVAYHDTEAKNLGSGTLNPA---DGTYLNQFRMDEGVDISYTKFHNAPDRIDDNPYDLVQPPDHQLYVGWTEPGEWFNVTVQAARAGVYSADLLYTSNRGGAISVDLNGKAASG 157
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|522207939|ref|WP_020715406.1| (hypothetical protein [Acidobacteriaceae bacterium KBS 89]) HSP 1 Score: 90.5077 bits (223), Expect = 4.261e-18 Identity = 57/143 (39.86%), Postives = 76/143 (53.15%), Query Frame = 0 Query: 26 YGTSPFADEKMQG-PQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQV---PIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164 Y +P+ D G Q IPG+V A++D GG+ VAYH D N+GS LNP D Y N FR +EG TSYTK D+ N +V P + +Y GW G W ++++ V G Y+ L TSN GGT+ L V+ Sbjct: 16 YKGTPYHDNHHSGVAQAIPGQVDCAYYDLGGEGVAYHDTDAKNNGSGALNPA---DGTYLNQFRMNEGVDTSYTK------FHDQIDDNPYEVIHPPENLLYVGWTEPGEWFKITVEVAHAGIYSADLLYTSNRGGTIALDVN 149 The following BLAST results are available for this feature:
BLAST of EWM25981.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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