EWM30230.1, cds467 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|585112889|gb|EWM30230.1| (elongation of very long chain fatty acids [Nannochloropsis gaditana]) HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 Query: 1 MKSHHSLPLPYYIMAGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKKANYLIEIDILRSTPVITTILQRHTHEGVHI 315 MKSHHSLPLPYYIMAGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKKANYLIEIDILRSTPVITTILQRHTHEGVHI Sbjct: 1 MKSHHSLPLPYYIMAGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKKANYLIEIDILRSTPVITTILQRHTHEGVHI 315
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|1154501351|gb|AQX92136.1| (delta-6 fatty acid elongase [Nannochloropsis oceanica]) HSP 1 Score: 496.508 bits (1277), Expect = 7.201e-176 Identity = 240/276 (86.96%), Postives = 254/276 (92.03%), Query Frame = 0 Query: 13 IMAGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKP--KKA 286 + A LADYQKTC +L+ AIFKWADPAG M+K+PTRTWPLAGLDVALAIAA YL+ VFVGS +MK+AQPVKLYGLQFFYNISQVALCSYMCIEA IQAYRNNYT LPCEPFN TNPP+ PLLWLFY+SK+FDFADTVFIILGKKW+QLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMY YYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIY+L VGCK F QITKLYLGYILSLLVLFLNFYFK+YS KPNGKKP KKA Sbjct: 1 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 276
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|551635079|ref|XP_005820376.1| (hypothetical protein GUITHDRAFT_98336 [Guillardia theta CCMP2712] >gi|428164368|gb|EKX33396.1| hypothetical protein GUITHDRAFT_98336 [Guillardia theta CCMP2712]) HSP 1 Score: 320.087 bits (819), Expect = 2.679e-106 Identity = 153/252 (60.71%), Postives = 191/252 (75.79%), Query Frame = 0 Query: 37 DPAGTMLKS-PTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVK--LYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKK 285 D +G +K PT+ W L A AI+A Y V VG IVM + + Y ++F YNI QV LCSYM +EA I AYR+NY L+PC PF T NPP+ P+LWLFYISK+ DF DT FI+LGKKW QLSFLHVYHH+TIF++YW+N+N GYDGDI+LT++LNG IHTVMY YYF+SMHTKDIWWKKYLT+ Q+IQF+TMN QAI++L C++FP ++T+LYL YI+SL LFLNF+ ++Y SPK KK KK Sbjct: 26 DDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVSPK--SKKAKK 275
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|673034746|ref|XP_008871334.1| (hypothetical protein H310_07682 [Aphanomyces invadans] >gi|574473305|gb|ETW00309.1| hypothetical protein H310_07682 [Aphanomyces invadans]) HSP 1 Score: 314.694 bits (805), Expect = 4.150e-104 Identity = 152/273 (55.68%), Postives = 189/273 (69.23%), Query Frame = 0 Query: 15 AGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPV-KLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTY-SSPKPNGKKPKK 285 A +++ + + WADP+G ++P WPLA A AIA YL FV VG++VMK P LQF YN Q+ALCSYMCIEA IQAYR+NY+++PC +NTT+P +G ++WLFYISKI DFADT FII GKKW QLSFLHVYHH+TIF +YWLN A YDGDI+LT+ILNG IHT+MY YYF+S HTK IWWKKYLT Q+IQF+TMN QA+ + CK P I +YL YI SL LF++F+ +Y SSP+ G K+ Sbjct: 3 AALWTEFKALTSPYESLVLDWADPSGQYKQNPMVDWPLADFSSAAAIALGYLAFVMVGTLVMKAGVPAFNTSALQFVYNPIQIALCSYMCIEAGIQAYRHNYSVMPCNSYNTTSPVMGNVMWLFYISKILDFADTFFIIAGKKWKQLSFLHVYHHLTIFSIYWLNFRALYDGDIYLTIILNGFIHTIMYTYYFVSAHTKTIWWKKYLTTMQLIQFVTMNVQAVMTISKECKGTPQNIAIMYLVYIQSLFWLFMHFFITSYCSSPRKEGTDKKR 275
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|1173958680|gb|OQS05005.1| (elongation of very long chain fatty acids protein [Thraustotheca clavata]) HSP 1 Score: 310.071 bits (793), Expect = 2.958e-102 Identity = 145/258 (56.20%), Postives = 184/258 (71.32%), Query Frame = 0 Query: 32 IFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPV-KLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTY-SSPKPNGKKPKKAN 287 I +WADP+G SPT+ WP+ A A+A YLVFV VG+I+MK P LQF YN Q+ALCSYMCIEA IQAYR++Y+++PC +NT P +G ++WLFY+SKI DF DT FII+GKKW QLSFLHVYHH+TIF +YWLN+ YDGD++LT+ILNG IHT+MY YYF+S HTK IWWKKYLT Q+IQF+TMN QA + C+ P ++ +YL YI SL LF+NF+ ++Y SP+ KK N Sbjct: 19 ILEWADPSGRYDLSPTKNWPMTDFTSAAAVALGYLVFVIVGTIIMKSGVPAFNTSALQFVYNPIQIALCSYMCIEAGIQAYRHDYSVMPCNAYNTAEPVMGNVMWLFYVSKILDFMDTFFIIVGKKWKQLSFLHVYHHLTIFSIYWLNIRVLYDGDVYLTIILNGFIHTIMYTYYFVSAHTKTIWWKKYLTTMQLIQFITMNVQAYMTISKKCEGAPMNVSIMYLVYIQSLFWLFMNFFVQSYCQSPRKEAGGKKKTN 276
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|676387449|ref|XP_009037003.1| (hypothetical protein AURANDRAFT_53701 [Aureococcus anophagefferens] >gi|323452400|gb|EGB08274.1| hypothetical protein AURANDRAFT_53701 [Aureococcus anophagefferens]) HSP 1 Score: 305.834 bits (782), Expect = 8.649e-101 Identity = 143/264 (54.17%), Postives = 185/264 (70.08%), Query Frame = 0 Query: 18 LADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKD--AQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPN 279 + DY+ + D I WA + P + W L A++IA AYL FV VGS++M+ +KLYG+ F YNI+QV LCSYMCIEAVI A R+N+ L+ C ++ +PP+ +LWLFY SK+ DF DT FI++GKKW QLSFLHVYHH TIFL YWLNL+ YDGDI+LT++LNGAIHT+MY YYF+SMHT+DIWWKKYLTL Q++QF MNAQAIY+ GC + P ++T +Y YI+SL +LFL F+ +Y K Sbjct: 1 MTDYE----AIGDQIIAWALVGSDVTDEPVKGWALGSFTTAISIAGAYLAFVLVGSLIMRAYPGDGIKLYGVAFLYNIAQVMLCSYMCIEAVIVAKRSNFNLV-CNSYDAKHPPMANVLWLFYASKVLDFVDTFFIVIGKKWKQLSFLHVYHHTTIFLFYWLNLHVNYDGDIYLTIVLNGAIHTIMYTYYFVSMHTRDIWWKKYLTLAQLVQFTCMNAQAIYMFVTGCSATPPRVTAIYFVYIISLFILFLQFFMSSYVPKKKK 259
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|1173934986|gb|OQR86175.1| (elongation of very long chain fatty acids protein [Achlya hypogyna]) HSP 1 Score: 302.753 bits (774), Expect = 1.991e-99 Identity = 143/257 (55.64%), Postives = 180/257 (70.04%), Query Frame = 0 Query: 32 IFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPV-KLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKKAN 287 I +WADP+G SPT+ W + A AIA AYLVFV VG+IVMK P LQF YN Q+ALCSYMCIEA IQAYR++Y+++PC ++ + P +G ++WLFY+SKI DF DT FII+GKKW QLSFLHVYHH+TIF +YWLN+ YDGDI+LT+ILNG IHT+MY YYF+S HTK IWWKKYLT Q+IQF+TMN QA + C P ++ +YL YI SL LF++F+ ++Y KK N Sbjct: 19 ILEWADPSGRYELSPTKDWAMTDFSTAAAIALAYLVFVIVGTIVMKSGVPAFNTSALQFVYNPIQIALCSYMCIEAGIQAYRHDYSVMPCNAYDVSKPVMGNVMWLFYVSKILDFMDTFFIIVGKKWKQLSFLHVYHHLTIFSIYWLNIRVLYDGDIYLTIILNGFIHTIMYTYYFVSAHTKTIWWKKYLTTMQLIQFVTMNVQAYMTISKKCDGAPMNVSIMYLVYIQSLFWLFMHFFIQSYCQTPRKEAGAKKTN 275
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|813163791|ref|XP_012202956.1| (hypothetical protein SPRG_08322 [Saprolegnia parasitica CBS 223.65] >gi|641532210|gb|KDO26247.1| hypothetical protein SPRG_08322 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 301.982 bits (772), Expect = 4.003e-99 Identity = 140/261 (53.64%), Postives = 181/261 (69.35%), Query Frame = 0 Query: 28 LTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQP-VKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKKAN 287 + I +WADP+G SPT+ W + A AIA AYLVFV VG++VMK P + LQF YN Q+ALCSYMCIEA IQAYR++Y+++PC ++ P +G ++WLFY+SKI DF DT FII+GKKW QLSFLHVYHH+TIF +YWLN+ YDGD++LT+ILNG IHT+MY YYF+S HTK IWWKKY+T Q+IQF+TMN QA + C P ++ +YL YI SL LF++F+ ++Y KK N Sbjct: 15 MEKVILEWADPSGRYELSPTKDWAMTDFSTAAAIALAYLVFVIVGTLVMKSGVPAINTSALQFVYNPIQIALCSYMCIEAGIQAYRHDYSVMPCNAYDVAKPVMGNVMWLFYVSKILDFMDTFFIIVGKKWKQLSFLHVYHHLTIFSIYWLNIRVLYDGDVYLTIILNGFIHTIMYTYYFVSAHTKTIWWKKYITTMQLIQFVTMNVQAYMTISKKCDGAPMNVSIMYLVYIQSLFWLFMHFFIQSYCQTPRKEASAKKTN 275
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|667305627|gb|AIG53905.1| (delta6-C18 elongase protein, partial [Pythium sp. BCC53698]) HSP 1 Score: 298.901 bits (764), Expect = 6.612e-98 Identity = 143/268 (53.36%), Postives = 180/268 (67.16%), Query Frame = 0 Query: 19 ADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQP-VKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKK 285 A Y++ E W DP+G SP +T P A A AI AYL FV VG++VMK P +K LQF YN QV LCSYMC+EA IQAYRN Y+ PC +N NP +G +L++FY+SKI DF DT FII+GKKW+QLSFLHVYHH+TIF +Y++N YD DI+ T+ILNG IHT+MY YYF+S HT+DIWWKKYLT Q++QFLTMNAQ ++ C FP ++ +YL YI SL LF+NF+ K+Y + K KK Sbjct: 7 ASYKQWADETETLFLDWVDPSGGYKLSPMQTLPFADFASAFAICVAYLTFVAVGTLVMKAGVPAIKTSALQFVYNPLQVVLCSYMCVEAGIQAYRNGYSATPCNAYNAENPVMGNVLYMFYLSKILDFCDTFFIIVGKKWNQLSFLHVYHHLTIFFIYYMNFRVAYDADIYATIILNGFIHTIMYMYYFVSAHTRDIWWKKYLTAMQMVQFLTMNAQGYLMVSRECPGFPPKVPIMYLAYIQSLFWLFMNFFVKSYCTKPRKAKADKK 274
BLAST of EWM30230.1 vs. NCBI_GenBank
Match: gi|698796618|ref|XP_009831338.1| (hypothetical protein H257_07493 [Aphanomyces astaci] >gi|574114008|gb|ETV79497.1| hypothetical protein H257_07493 [Aphanomyces astaci]) HSP 1 Score: 298.13 bits (762), Expect = 1.497e-97 Identity = 151/269 (56.13%), Postives = 187/269 (69.52%), Query Frame = 0 Query: 20 DYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQP-VKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKPKKAN 287 +++ + + WADP+G ++P WPLA A AIA AYL FV VG++VMK P + LQF YN Q+ALCSYMCIEA IQAYR+NY+ +PC FNTT+P +G ++WLFYISKI DFADT FII GKKW QLSFLHVYHH+TIF +YWLN A YDGD++LT+ILNG IHT+MY YYF+S HTK IWWKKYLT Q+IQF+TMN QA+ I+ C+ P I LYL YI SL LF++F+ +Y + KK N Sbjct: 8 EFKALTSPYESIVLDWADPSGQYKQNPMVEWPLADFSSAAAIALAYLAFVIVGTLVMKSGVPALNTSALQFVYNPIQIALCSYMCIEAGIQAYRHNYSPMPCNAFNTTSPVMGNVMWLFYISKILDFADTFFIIAGKKWKQLSFLHVYHHLTIFSIYWLNFRALYDGDVYLTIILNGFIHTIMYTYYFVSSHTKTIWWKKYLTTLQLIQFVTMNVQAVLIISKECQGPPQNIAVLYLVYIQSLFWLFMHFFITSYCTAPRKEVADKKRN 276 The following BLAST results are available for this feature:
BLAST of EWM30230.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|