EWM26011.1, cds4664 (CDS) Nannochloropsis gaditana

Overview
NameEWM26011.1
Unique Namecds4664
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:35597..35722 -
Alignment locationCM002464.1:35136..35301 -
Alignment locationCM002464.1:34885..35004 -
Alignment locationCM002464.1:34542..34700 -
Alignment locationCM002464.1:34253..34380 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26011.1
ProductAutophagy-related protein 1010 family protein
Orig transcript idgnl|cribi|Naga_100150g12.10687.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:35597..35722 -
CM002464.1supercontigCM002464.1:35136..35301 -
CM002464.1supercontigCM002464.1:34885..35004 -
CM002464.1supercontigCM002464.1:34542..34700 -
CM002464.1supercontigCM002464.1:34253..34380 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR012445ATG101
Homology
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|585107925|gb|EWM26010.1| (Autophagy-related protein 1010 family protein [Nannochloropsis gaditana])

HSP 1 Score: 474.167 bits (1219), Expect = 1.072e-168
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQ+
Sbjct:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQI 232          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|585107926|gb|EWM26011.1| (Autophagy-related protein 1010 family protein [Nannochloropsis gaditana])

HSP 1 Score: 472.241 bits (1214), Expect = 1.680e-168
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV
Sbjct:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|1210515111|dbj|GAX26074.1| (hypothetical protein FisN_4Hh422 [Fistulifera solaris])

HSP 1 Score: 135.961 bits (341), Expect = 5.653e-36
Identity = 83/238 (34.87%), Postives = 120/238 (50.42%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKV-----ERPTSSSSSSSPFSVAR-IDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            MN KEH L ELEL     + ALQC+LH+I+FLR+P  V P++V C    L+Y ++      +P + +  +   S+   ID+ VD A+++ LR L+  GP L  G L ++F+ERR T   F L+ +EERVVFE+W+I  +V+                                     +T  P S       D A  +E+QR Q   E +LRS L  I+ +  G IDH+PPV Y F +
Sbjct:    1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDVECEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVIRLVVN-------------------------------------NTPRPIS------NDSAALMERQRIQDTAEGMLRSVLSKIFEITGGPIDHLPPVMYEFDI 195          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|1072228534|gb|OEU13269.1| (hypothetical protein FRACYDRAFT_275992 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 130.568 bits (327), Expect = 4.436e-34
Identity = 84/233 (36.05%), Postives = 120/233 (51.50%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLR-LSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            MN KEH L ELEL     +EALQ +L++I+F+R+P  V PR+V C     L+YP++   TSSS S+  + V   D+ VD ++   L  L+  GP L  G L L+F+ERR+T   F L+ NEERVV+E+W +  +V+                                     +T  P S      +D A  +E+QR Q   E +LRS L  +Y +   SIDH+PPV Y F++
Sbjct:    1 MNCKEHYLPELELATGQVREALQAILYTILFIRSPGPVSPRDVECEGFDFLTYPRI--ATSSSLSTLNYDV---DKRVDQSIQNFLMKLSQIGPELLSGGLTLSFFERRKTQQLFGLVSNEERVVWEQWHLRVVVN-------------------------------------NTPRPVS------DDSAAVIERQRIQDTAEGMLRSVLVKVYEIAGVSIDHVPPVMYEFEI 185          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|299471935|emb|CBN79615.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 120.553 bits (301), Expect = 4.495e-31
Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDS 136
            MN KEHVL ELEL   + ++ALQCLLH+I+F+RAP  +RPRE HC +  LS+ +                  +D  VD AL+   R+L PAGP+LS+G + ++F+ RR+  S F L   EE+VV+E+W++P LV++
Sbjct:    1 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFARC-------------GARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVNT 122          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|1210516819|dbj|GAX24308.1| (hypothetical protein FisN_4Lh422 [Fistulifera solaris])

HSP 1 Score: 113.62 bits (283), Expect = 7.718e-28
Identity = 58/142 (40.85%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKV-----ERPTSSSSSSSPFSVAR-IDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDS 136
            MN KEH L ELEL     + ALQC+LH+I+FLR+P  V P++V C    L+Y ++      +P + +  +   S+   ID+ VD A+++ LR L+  GP L  G L ++F+ERR T   F L+ +EERVVFE+W++  +V++
Sbjct:    1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDVECEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVMRVVVNN 142          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|223995589|ref|XP_002287468.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976584|gb|EED94911.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 112.849 bits (281), Expect = 4.990e-27
Identity = 72/243 (29.63%), Postives = 117/243 (48.15%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVER-----PTSSSS----SSSPFSVAR--IDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            MN + H L E E    H +EALQ +LH+I+F+R+P  V P +V C     +Y ++       PT   S    +  P ++ +  +D  VD +++  L+ L+P GP L  G L L+F+ERR     F L+  EE+VV+E+W++  +V++                                        P  +   GG++ +I +E+QR Q   E +L++ L  ++ L    IDHIPPV Y F++
Sbjct:    1 MNCQVHQLPEFESATSHVREALQAILHTILFIRSPGQVAPYDVQCESFDTTYTRIATDNDPPPTLHQSRQHHNQQPTNLLKSDLDRKVDDSIETFLQTLSPIGPELMAGCLTLSFFERRAKNKLFGLVHQEEKVVWEQWVLRVVVNNT---------------------------------------PRPM---GGDEASI-IERQRIQDTAEGMLKAVLFKVFDLAGSEIDHIPPVMYDFEI 200          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|397602648|gb|EJK58226.1| (hypothetical protein THAOC_21671 [Thalassiosira oceanica])

HSP 1 Score: 109.383 bits (272), Expect = 9.934e-26
Identity = 70/243 (28.81%), Postives = 108/243 (44.44%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPT-----------SSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            MN   H L ELE   L  +EAL  ++H+++F+R+P  V P +VHC    L+Y ++               S   + S  S  ++D  VD +++  L+ LTP GP L  G+L ++F+ERR     F L   EE+V FE+WI+  LV++    +                                           GED A  +E+QR Q   E +L++ +  I+ L N   DH+P   Y F +
Sbjct:    1 MNCHIHQLPELETATLAVREALAAVIHTVLFIRSPGPVSPFDVHCESFGLTYTRIATENDPLHGIVTGGASRRQNKSTSSYQQLDRKVDGSIEEFLQTLTPIGPELMAGNLAISFFERRPKKQLFGLHITEEKVPFEQWIVRVLVNNTPRPT-------------------------------------------GEDEASVIERQRIQDTAEGMLKAVMLKIFELANIYTDHVPSSMYDFDI 200          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|1214680791|gb|OWY99845.1| (hypothetical protein PHMEG_00029080 [Phytophthora megakarya])

HSP 1 Score: 85.1149 bits (209), Expect = 2.082e-16
Identity = 69/246 (28.05%), Postives = 104/246 (42.28%), Query Frame = 0
Query:    4 KEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRN---------LTPAGP--------NLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAVEQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYLFQV 232
            KEH+L E+ +      +A+ CLLH+I+F RAP  VRP E  C     ++P V     +    S     ++D  V S  +A L           +TP G           + G++V+TF+ER+   + F L+ NEE+ VFE+WI+P          T+ SS +AS +                                        E++     TEA L++ L  I T V  SI+HIP   Y F++
Sbjct:   28 KEHLLDEVPVAAEDVGDAVTCLLHTILFTRAPGPVRPSEATCH----AFPNVTYALCAVGDVS----RKVDHAVRSFEEAVLAGGSYLMGSSMMTPYGQPVNSVNVRGANSGYIVVTFFERKVKKALFGLMSNEEKTVFEKWILPV---------TVTSSPAASQE----------------------------------------ERELCAGETEAALQNALLHILTAVQ-SIEHIPTAMYDFEI 215          
BLAST of EWM26011.1 vs. NCBI_GenBank
Match: gi|551552774|ref|XP_005763732.1| (hypothetical protein EMIHUDRAFT_437602 [Emiliania huxleyi CCMP1516] >gi|551626286|ref|XP_005793213.1| hypothetical protein EMIHUDRAFT_460334 [Emiliania huxleyi CCMP1516] >gi|485613216|gb|EOD11303.1| hypothetical protein EMIHUDRAFT_437602 [Emiliania huxleyi CCMP1516] >gi|485647696|gb|EOD40784.1| hypothetical protein EMIHUDRAFT_460334 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 82.8037 bits (203), Expect = 1.101e-15
Identity = 72/231 (31.17%), Postives = 104/231 (45.02%), Query Frame = 0
Query:    1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERPTSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPAIAV--EQQRAQARTEALLRSRLQDIYTLVNGSIDHIPPVSYL 229
            MN ++  L EL +     KE L+ LLHSIIF RA    R R+V      +SY + +         S    AR++E  ++   A  R     G  +S     L F+ERR   + F L ++EERVV+E W IP +V                   F  +H          H   + +PP + +G G    A +   E +R QA  EA+LR R++ I T+ +G  +HIPP   L
Sbjct:    1 MNCEQIALEELHVERFQLKEVLKILLHSIIFQRALGECRLRDVDSELFDISYVRCD---------SRLVEARVEEHAEAFSSAIER-----GARVS-----LAFFERRARQAAFGLFRSEERVVWERWTIPLVVVP----------------NFAQLH---------RHMGGAQMPPGA-HGAGRSTEADSQDEESRRRQASLEAVLRRRIEFILTVASGRREHIPPADGL 186          
The following BLAST results are available for this feature:
BLAST of EWM26011.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107925|gb|EWM26010.1|1.072e-16899.57Autophagy-related protein 1010 family protein [Nan... [more]
gi|585107926|gb|EWM26011.1|1.680e-168100.00Autophagy-related protein 1010 family protein [Nan... [more]
gi|1210515111|dbj|GAX26074.1|5.653e-3634.87hypothetical protein FisN_4Hh422 [Fistulifera sola... [more]
gi|1072228534|gb|OEU13269.1|4.436e-3436.05hypothetical protein FRACYDRAFT_275992 [Fragilario... [more]
gi|299471935|emb|CBN79615.1|4.495e-3144.12conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210516819|dbj|GAX24308.1|7.718e-2840.85hypothetical protein FisN_4Lh422 [Fistulifera sola... [more]
gi|223995589|ref|XP_002287468.1|4.990e-2729.63predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397602648|gb|EJK58226.1|9.934e-2628.81hypothetical protein THAOC_21671 [Thalassiosira oc... [more]
gi|1214680791|gb|OWY99845.1|2.082e-1628.05hypothetical protein PHMEG_00029080 [Phytophthora ... [more]
gi|551552774|ref|XP_005763732.1|1.101e-1531.17hypothetical protein EMIHUDRAFT_437602 [Emiliania ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4676rna4676Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications