EWM26016.1, cds4653 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|585107931|gb|EWM26016.1| (hormone-sensitive lipase [Nannochloropsis gaditana]) HSP 1 Score: 320.857 bits (821), Expect = 9.138e-111 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query: 1 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEGVKGGAGGMDGMIVETGLMQGETGEEVACDVGAAVGGEGLLGIATEEE 165
MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEGVKGGAGGMDGMIVETGLMQGETGEEVACDVGAAVGGEGLLGIATEEE
Sbjct: 1 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEGVKGGAGGMDGMIVETGLMQGETGEEVACDVGAAVGGEGLLGIATEEE 165
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|553185810|ref|XP_005854311.1| (hormone-sensitive lipase, partial [Nannochloropsis gaditana CCMP526] >gi|422294750|gb|EKU22050.1| hormone-sensitive lipase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 234.572 bits (597), Expect = 6.365e-77 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query: 1 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEG 118
MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEG
Sbjct: 26 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEG 143
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|219111379|ref|XP_002177441.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411976|gb|EEC51904.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 102.064 bits (253), Expect = 3.862e-22 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
DP+LP GL +A++DAYLPS + ++PL+SP +A D L RFPPT + G DPLLDD+V F+ +L ++GV S LR +LPH +LGL
Sbjct: 640 DPVLPSGLISAISDAYLPSESGISKKNPLVSPIYAADDCLRRFPPTLLFAGSNDPLLDDSVAFNKKLCYLGVESELRAVANLPHAYLGL 728
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|1210523057|dbj|GAX18108.1| (hormone-sensitive lipase [Fistulifera solaris]) HSP 1 Score: 95.9005 bits (237), Expect = 6.012e-20 Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
DP+LP GL +A+ +AY + DPL+SPYFA D +L RFPPT DPLLDD V + RLR +GV S LR ++LPH +LGL
Sbjct: 622 DPVLPHGLISAICNAYGAGIN---KTDPLVSPYFAADSVLERFPPTLFFASSNDPLLDDAVALNQRLRSLGVESYLRAAQNLPHAYLGL 707
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|1210531392|dbj|GAX10060.1| (hormone-sensitive lipase [Fistulifera solaris]) HSP 1 Score: 94.3597 bits (233), Expect = 2.109e-19 Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
DP+LP GL +A+++AY + DPL+SPYFA D +L FPPT DPLLDD V + RLR +GV S LR ++LPH +LGL
Sbjct: 621 DPVLPHGLISAISNAYGAGMN---KTDPLVSPYFAADSVLEHFPPTLFFASSNDPLLDDAVALNQRLRSLGVESYLRAAQNLPHAYLGL 706
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|1072231904|gb|OEU16636.1| (Abhydrolase_3-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 84.7297 bits (208), Expect = 1.423e-17 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
DP+LP L +A++DAYLP +DPL SP++A D +L RFPPT + DPLLDD+V F+ RL +GV S L ++PH +LGL
Sbjct: 64 DPVLPNALISAISDAYLPPGFN--KKDPLASPHYAPDSVLRRFPPTLLFASSKDPLLDDSVTFNERLSVLGVDSELMAVNNVPHAYLGL 150
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|953503521|emb|CEG35531.1| (hormone-sensitive lipase [Plasmopara halstedii]) HSP 1 Score: 88.5817 bits (218), Expect = 1.944e-17 Identity = 50/112 (44.64%), Postives = 63/112 (56.25%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
DP+LP G+ Y PS DP +SP A D LL +FPPT + VG DPLLDD+VDF RL ++ VPS+L++ L HGFL +YG + A TAI E R
Sbjct: 595 DPVLPRGILELALTTYYPSHGHSNQYKHNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSYLKVPSSLKIYSGLSHGFL-IYGDLVPEAQTAIDETCER 705
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|301105164|ref|XP_002901666.1| (hormone-sensitive lipase, putative [Phytophthora infestans T30-4] >gi|262100670|gb|EEY58722.1| hormone-sensitive lipase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 86.6557 bits (213), Expect = 8.333e-17 Identity = 50/112 (44.64%), Postives = 62/112 (55.36%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
DP+LP G+ +Y PS DP +SP A D LL +FPPT + VG DPLLDD+VDF RL + VPSTL++ L HGFL +YG + A AI E R
Sbjct: 595 DPVLPRGILELALTSYYPSHGHSNQYKLNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSFLKVPSTLKIYSGLSHGFL-IYGDLVPEAQKAIDETCER 705
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|970635157|gb|KUF80137.1| (Esterase [Phytophthora nicotianae]) HSP 1 Score: 86.2705 bits (212), Expect = 1.251e-16 Identity = 50/112 (44.64%), Postives = 62/112 (55.36%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
DP+LP G+ +Y PS DP +SP A D LL +FPPT + VG DPLLDD+VDF RL + VPSTL++ L HGFL +YG + A AI E R
Sbjct: 595 DPVLPRGILELALTSYYPSHGHSNQYKLNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSFLKVPSTLKIYSGLSHGFL-IYGDLVPEAQKAIDETCER 705
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|675195479|ref|XP_008906624.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568093021|gb|ETN07820.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 86.2705 bits (212), Expect = 1.251e-16 Identity = 50/112 (44.64%), Postives = 62/112 (55.36%), Query Frame = 0
Query: 3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
DP+LP G+ +Y PS DP +SP A D LL +FPPT + VG DPLLDD+VDF RL + VPSTL++ L HGFL +YG + A AI E R
Sbjct: 595 DPVLPRGILELALTSYYPSHGHSNQYKLNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSFLKVPSTLKIYSGLSHGFL-IYGDLVPEAQKAIDETCER 705 The following BLAST results are available for this feature:
BLAST of EWM26016.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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