EWM30249.1, cds464 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30249.1 vs. NCBI_GenBank
Match: gi|585112908|gb|EWM30249.1| (hypothetical protein Naga_100003g11 [Nannochloropsis gaditana]) HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query: 1 MGFNAQPSNTLERHNDHHCPSEARLLLLAMLRVGTLLALGCSLLGTNAFTFPSMSCNVFQRHEKNAMKVSEALYRADVFRFAGSAFVGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINKFEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKVRGTALSIDKIHMCVFVYLLCIAKYQPVIENSGVSIAARHNLPSSSEAKPLDEK 322
MGFNAQPSNTLERHNDHHCPSEARLLLLAMLRVGTLLALGCSLLGTNAFTFPSMSCNVFQRHEKNAMKVSEALYRADVFRFAGSAFVGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINKFEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKVRGTALSIDKIHMCVFVYLLCIAKYQPVIENSGVSIAARHNLPSSSEAKPLDEK
Sbjct: 1 MGFNAQPSNTLERHNDHHCPSEARLLLLAMLRVGTLLALGCSLLGTNAFTFPSMSCNVFQRHEKNAMKVSEALYRADVFRFAGSAFVGAALLIGRPEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINKFEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKVRGTALSIDKIHMCVFVYLLCIAKYQPVIENSGVSIAARHNLPSSSEAKPLDEK 322
BLAST of EWM30249.1 vs. NCBI_GenBank
Match: gi|922856900|gb|KOO25208.1| (hypothetical protein Ctob_012426 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 80.8777 bits (198), Expect = 1.856e-14 Identity = 59/183 (32.24%), Postives = 88/183 (48.09%), Query Frame = 0
Query: 99 SEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINKFEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKGDLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKVRGTALS-IDKIH 280
S AE TL +R+ Y RY PRI+ RDF A + + DWAA+ +E + N I KF + PMR+++ S S K S K A+ +A EL A + LQ+ A G + KD G F GG D+ ++ K+A+ + AFN ++E+ N G + + +D I
Sbjct: 47 SFAEATLVTRQQAYTRYVPRIERGRDFWAGGLRKYIASSDWAAIQREFE--------PLGKNKGGAIPKF----FGPMRLYASSFSSKTISDKTLAMEEAVDELAEAANGLQIAADGTI----KDTGLFSFLGGKKTMDEG---SRSKLAQDAYKKGVLAFNKYIEISNDGLGISFAPMDTID 210
BLAST of EWM30249.1 vs. NCBI_GenBank
Match: gi|551661533|ref|XP_005833533.1| (hypothetical protein GUITHDRAFT_152403 [Guillardia theta CCMP2712] >gi|428177674|gb|EKX46553.1| hypothetical protein GUITHDRAFT_152403 [Guillardia theta CCMP2712]) HSP 1 Score: 75.485 bits (184), Expect = 5.802e-12 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 0
Query: 96 PEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINK--FEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQ 210
P+ S A+ TL S K YFRYAPRI+ RDF + ++ ++K +W +A+ YE+ A + S + + I + E+ L+ PM++F S EKG PK + EL A D+++
Sbjct: 87 PQNSFADMTLNSFKRAYFRYAPRIEEGRDFFVLEVRSLIEKGEWDKIASLYELTSVAQEGSSKKSIGLDIKQSALERTLFLPMQVFITSFEEKGTGPKQRKMNAQVDELILACDKIK 203
BLAST of EWM30249.1 vs. NCBI_GenBank
Match: gi|873228229|emb|CEM16218.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 66.6254 bits (161), Expect = 2.719e-9 Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 0
Query: 96 PEASEAETTLASRKVLYFRYAPRIKSARDFLAKDFKAALDKKDWAAVAAAYEIEKQAPDSSMRNNPQRFINKFEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKG 215
P + A+ L S K YFRY PRI+ RD D + A++ ++W AV + +E+ R N + + + L PM I+S S SEKG + L E E ALD++ + + G
Sbjct: 38 PSTAAADIDLMSAKRSYFRYVPRIEKGRDMYVLDLRPAIESENWQAVQSFFEV---------RKNDNTYASYY---LTRPMEIWSTSFSEKGTGDRTKQLQSIAKEFEDALDKINVASGG 145
BLAST of EWM30249.1 vs. NCBI_GenBank
Match: gi|299116434|emb|CBN74699.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 59.3066 bits (142), Expect = 3.080e-7 Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 0
Query: 129 DFKAALDKKDWAAVAAAYEIEKQA-PDSSMRNNPQRFINKFEKDLYSPMRIFSQSLSEKGASPKLTALLKAEGELEAALDRLQLVAKG-DLKPPKKDGGFLGFGGGAPVEDKYAGLNQEKMAKALFADAKTAFNAWVEVVNKVRGTALSIDKI 279
D + A+ ++DW V A +E+ A DSS Q ++ +++L+SP+ +++QS+S KG KL ALL E +LE A+ L+ A G LK G +Q + AKA + + A +VEV NK G S+ KI
Sbjct: 7 DLQKAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTGAKLRALLSQEEKLEQAMASLEKAASGKSLKE---------------------GESQGQAAKAAWEAGRDALQEYVEVANK--GMVRSLRKI 136 The following BLAST results are available for this feature:
BLAST of EWM30249.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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