EWM26035.1, cds4637 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|585107958|gb|EWM26035.1| (sulphydryl oxidase [Nannochloropsis gaditana]) HSP 1 Score: 1165.6 bits (3014), Expect = 0.000e+0 Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0
Query: 1 MKGSLILGAVNLISVFTVHTVQAATCPSVRLNVNVPSIVKPTRAFRAKFKVTNTNRNVATGLALTVTLPIEFTLFKASPAPSNTLNPWSLVYGDITLGPLKSMHVVVRGLVGECFQGSMTFNATVAVPADNTCAPVTAARTLSIKDRTGTKRPPYCMTNTSQLNVDCGVPLPTFSVEPFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCIVWGTVPLCKSVGETDCQAVNTTEPCGTVAPYLAPTPAPLTASPTPSSELIVECGIVLPPSISDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMTNFCATDGVSAGYELCRGKDESACEELATTPPCGYLVPFP 567
MKGSLILGAVNLISVFTVHTVQAATCPSVRLNVNVPSIVKPTRAFRAKFKVTNTNRNVATGLALTVTLPIEFTLFKASPAPSNTLNPWSLVYGDITLGPLKSMHVVVRGLVGECFQGSMTFNATVAVPADNTCAPVTAARTLSIKDRTGTKRPPYCMTNTSQLNVDCGVPLPTFSVEPFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCIVWGTVPLCKSVGETDCQAVNTTEPCGTVAPYLAPTPAPLTASPTPSSELIVECGIVLPPSISDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMTNFCATDGVSAGYELCRGKDESACEELATTPPCGYLVPFP
Sbjct: 1 MKGSLILGAVNLISVFTVHTVQAATCPSVRLNVNVPSIVKPTRAFRAKFKVTNTNRNVATGLALTVTLPIEFTLFKASPAPSNTLNPWSLVYGDITLGPLKSMHVVVRGLVGECFQGSMTFNATVAVPADNTCAPVTAARTLSIKDRTGTKRPPYCMTNTSQLNVDCGVPLPTFSVEPFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCIVWGTVPLCKSVGETDCQAVNTTEPCGTVAPYLAPTPAPLTASPTPSSELIVECGIVLPPSISDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMTNFCATDGVSAGYELCRGKDESACEELATTPPCGYLVPFP 567
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|551611665|ref|XP_005786913.1| (hypothetical protein EMIHUDRAFT_363535 [Emiliania huxleyi CCMP1516] >gi|485640225|gb|EOD34484.1| hypothetical protein EMIHUDRAFT_363535 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 141.739 bits (356), Expect = 3.042e-34 Identity = 69/160 (43.12%), Postives = 93/160 (58.13%), Query Frame = 0
Query: 178 PFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMP---CQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYA-YQPDFCATCIVWGTVPLC 333
PFP GTCGS +SDPR FGP W+ H A NY P AC +FI ALPYM+PC C + G+FI NIE++ ++ C + + C P +AC +Q SLV+FF+RAH++V+ T PC+ +T + Y PDFCA IVWG+ +C
Sbjct: 90 PFPPGTCGSRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQIC 249 HSP 2 Score: 134.035 bits (336), Expect = 1.366e-31 Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 387 SDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMP---CESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMT-NFCATDGVSAGYELCRGK---DESACEEL 554
S +P G CG+R++ DPRVFGP+ W+T H A Y PT AC FI ALP+++PC HC D FI N+EN+G +N C + C + E+AC ++ +LVSFF+RAH+NV+ + PC+P ++ ++ D + + +FCA D V ++C G CEE+
Sbjct: 89 SPFPPGTCGSRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQICGGGYCAPRGPCEEM 263
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|551577146|ref|XP_005774216.1| (hypothetical protein EMIHUDRAFT_435722 [Emiliania huxleyi CCMP1516] >gi|485625987|gb|EOD21787.1| hypothetical protein EMIHUDRAFT_435722 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 139.428 bits (350), Expect = 2.023e-33 Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 0
Query: 178 PFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMP---CQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYA-YQPDFCATCIVWGTVPLC 333
PFP GTCG +SDPR FGP W+ H A NY P AC +FI ALPYM+PC C + G+FI NIE++ ++ C + + C P +AC +Q SLV+FF+RAH++V+ T PC+ +T + Y PDFCA IVWG+ +C
Sbjct: 90 PFPPGTCGLRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQIC 249 HSP 2 Score: 132.88 bits (333), Expect = 4.037e-31 Identity = 68/175 (38.86%), Postives = 100/175 (57.14%), Query Frame = 0
Query: 387 SDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMP---CESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMT-NFCATDGVSAGYELCRGK---DESACEEL 554
S +P G CG R++ DPRVFGP+ W+T H A Y PT AC FI ALP+++PC HC D FI N+EN+G +N C + C + E+AC ++ +LVSFF+RAH+NV+ + PC+P ++ ++ D + + +FCA D V ++C G CEE+
Sbjct: 89 SPFPPGTCGLRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQICGGGYCAPRGPCEEM 263
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|551555351|ref|XP_005764872.1| (hypothetical protein EMIHUDRAFT_213712 [Emiliania huxleyi CCMP1516] >gi|485614661|gb|EOD12443.1| hypothetical protein EMIHUDRAFT_213712 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 126.331 bits (316), Expect = 5.982e-29 Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 0
Query: 178 PFPVGTCGS----IPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPAC----QASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCI---VWGTVPLC 333
P G+C + I +DPR FGP W+ H+ A N+P P QAC +F+ ALPY++PC CG+ GEFI NI++ P C + +QD PC++P +AC + +L +FF RAH++V+ T PC+ +T A + Y P+ TC+ VWG+ LC
Sbjct: 50 PNSTGSCATKDNHIGTTDPRVFGPSLWRAFHLIAANFPSPPTDAAHQACVNFVMALPYLVPCRHCGWDLGEFIKRNIQNDTISDPGCFGFSEETQDFTEPCESPERACTSTYNLTSFFARAHNNVNSHTNPCRKPYTTKDALQQYLAAPE--GTCLHNTVWGSKQLC 214 HSP 2 Score: 117.087 bits (292), Expect = 1.039e-25 Identity = 61/152 (40.13%), Postives = 84/152 (55.26%), Query Frame = 0
Query: 399 TGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAAC----AANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAF-AVMTNFCATDGVSAGYELCRG 545
T DPRVFGP WR H A +P PT +ACVNF+ ALP+L+PC HCG D FI N++N + C + PCES E+AC + NL SFF RAH+NV+ + PC+ ++ ++A+ + A C + V +LC G
Sbjct: 65 TTDPRVFGPSLWRAFHLIAANFPSPPTDAAHQACVNFVMALPYLVPCRHCGWDLGEFIKRNIQNDTISDPGCFGFSEETQDFTEPCESPERACTSTYNLTSFFARAHNNVNSHTNPCRKPYTTKDALQQYLAAPEGTCLHNTVWGSKQLCTG 216 The following BLAST results are available for this feature:
BLAST of EWM26035.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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