EWM26035.1, cds4637 (CDS) Nannochloropsis gaditana

Overview
NameEWM26035.1
Unique Namecds4637
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1144144..1144566 +
Alignment locationCM002463.1:1144826..1145134 +
Alignment locationCM002463.1:1145470..1145920 +
Alignment locationCM002463.1:1146258..1146436 +
Alignment locationCM002463.1:1146655..1146996 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26035.1
Productsulphydryl oxidase
Orig transcript idgnl|cribi|Naga_100526g1.5527.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1144144..1144566 +
CM002463.1supercontigCM002463.1:1144826..1145134 +
CM002463.1supercontigCM002463.1:1145470..1145920 +
CM002463.1supercontigCM002463.1:1146258..1146436 +
CM002463.1supercontigCM002463.1:1146655..1146996 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016972thiol oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR017905ERV/ALR_sulphydryl_oxidase
Homology
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|585107958|gb|EWM26035.1| (sulphydryl oxidase [Nannochloropsis gaditana])

HSP 1 Score: 1165.6 bits (3014), Expect = 0.000e+0
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0
Query:    1 MKGSLILGAVNLISVFTVHTVQAATCPSVRLNVNVPSIVKPTRAFRAKFKVTNTNRNVATGLALTVTLPIEFTLFKASPAPSNTLNPWSLVYGDITLGPLKSMHVVVRGLVGECFQGSMTFNATVAVPADNTCAPVTAARTLSIKDRTGTKRPPYCMTNTSQLNVDCGVPLPTFSVEPFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCIVWGTVPLCKSVGETDCQAVNTTEPCGTVAPYLAPTPAPLTASPTPSSELIVECGIVLPPSISDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMTNFCATDGVSAGYELCRGKDESACEELATTPPCGYLVPFP 567
            MKGSLILGAVNLISVFTVHTVQAATCPSVRLNVNVPSIVKPTRAFRAKFKVTNTNRNVATGLALTVTLPIEFTLFKASPAPSNTLNPWSLVYGDITLGPLKSMHVVVRGLVGECFQGSMTFNATVAVPADNTCAPVTAARTLSIKDRTGTKRPPYCMTNTSQLNVDCGVPLPTFSVEPFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCIVWGTVPLCKSVGETDCQAVNTTEPCGTVAPYLAPTPAPLTASPTPSSELIVECGIVLPPSISDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMTNFCATDGVSAGYELCRGKDESACEELATTPPCGYLVPFP
Sbjct:    1 MKGSLILGAVNLISVFTVHTVQAATCPSVRLNVNVPSIVKPTRAFRAKFKVTNTNRNVATGLALTVTLPIEFTLFKASPAPSNTLNPWSLVYGDITLGPLKSMHVVVRGLVGECFQGSMTFNATVAVPADNTCAPVTAARTLSIKDRTGTKRPPYCMTNTSQLNVDCGVPLPTFSVEPFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCIVWGTVPLCKSVGETDCQAVNTTEPCGTVAPYLAPTPAPLTASPTPSSELIVECGIVLPPSISDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMTNFCATDGVSAGYELCRGKDESACEELATTPPCGYLVPFP 567          
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|551611665|ref|XP_005786913.1| (hypothetical protein EMIHUDRAFT_363535 [Emiliania huxleyi CCMP1516] >gi|485640225|gb|EOD34484.1| hypothetical protein EMIHUDRAFT_363535 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 141.739 bits (356), Expect = 3.042e-34
Identity = 69/160 (43.12%), Postives = 93/160 (58.13%), Query Frame = 0
Query:  178 PFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMP---CQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYA-YQPDFCATCIVWGTVPLC 333
            PFP GTCGS  +SDPR FGP  W+  H  A NY   P      AC +FI ALPYM+PC  C +  G+FI  NIE++  ++  C  +   +     C  P +AC +Q SLV+FF+RAH++V+  T PC+  +T     + Y    PDFCA  IVWG+  +C
Sbjct:   90 PFPPGTCGSRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQIC 249          

HSP 2 Score: 134.035 bits (336), Expect = 1.366e-31
Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 0
Query:  387 SDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMP---CESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMT-NFCATDGVSAGYELCRGK---DESACEEL 554
            S +P G CG+R++ DPRVFGP+ W+T H  A  Y   PT     AC  FI ALP+++PC HC  D   FI  N+EN+G +N  C    +       C + E+AC ++ +LVSFF+RAH+NV+ +  PC+P ++ ++  D +   + +FCA D V    ++C G        CEE+
Sbjct:   89 SPFPPGTCGSRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQICGGGYCAPRGPCEEM 263          
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|551577146|ref|XP_005774216.1| (hypothetical protein EMIHUDRAFT_435722 [Emiliania huxleyi CCMP1516] >gi|485625987|gb|EOD21787.1| hypothetical protein EMIHUDRAFT_435722 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 139.428 bits (350), Expect = 2.023e-33
Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 0
Query:  178 PFPVGTCGSIPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPACQASQDLNMP---CQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYA-YQPDFCATCIVWGTVPLC 333
            PFP GTCG   +SDPR FGP  W+  H  A NY   P      AC +FI ALPYM+PC  C +  G+FI  NIE++  ++  C  +   +     C  P +AC +Q SLV+FF+RAH++V+  T PC+  +T     + Y    PDFCA  IVWG+  +C
Sbjct:   90 PFPPGTCGLRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQIC 249          

HSP 2 Score: 132.88 bits (333), Expect = 4.037e-31
Identity = 68/175 (38.86%), Postives = 100/175 (57.14%), Query Frame = 0
Query:  387 SDWPMGQCGNRTTGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAACAANVTYGMP---CESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAFAVMT-NFCATDGVSAGYELCRGK---DESACEEL 554
            S +P G CG R++ DPRVFGP+ W+T H  A  Y   PT     AC  FI ALP+++PC HC  D   FI  N+EN+G +N  C    +       C + E+AC ++ +LVSFF+RAH+NV+ +  PC+P ++ ++  D +   + +FCA D V    ++C G        CEE+
Sbjct:   89 SPFPPGTCGLRSSSDPRVFGPHFWKTFHTMAVNYHSPPTKAALGACSAFIKALPYMIPCTHCAWDLGQFIQTNIENSGKYNETCMGATSEHFDESLCFAPEEACKSQRSLVSFFVRAHNNVNSHTNPCRPRFTIKQGYDMYKNSSPDFCARDIVWGSKQICGGGYCAPRGPCEEM 263          
BLAST of EWM26035.1 vs. NCBI_GenBank
Match: gi|551555351|ref|XP_005764872.1| (hypothetical protein EMIHUDRAFT_213712 [Emiliania huxleyi CCMP1516] >gi|485614661|gb|EOD12443.1| hypothetical protein EMIHUDRAFT_213712 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 126.331 bits (316), Expect = 5.982e-29
Identity = 64/167 (38.32%), Postives = 94/167 (56.29%), Query Frame = 0
Query:  178 PFPVGTCGS----IPASDPRAFGPDAWQMLHIFAQNYPEDPQPQVAQACESFINALPYMLPCEVCGYTFGEFILANIEHADTFSPAC----QASQDLNMPCQTPAQACATQSSLVNFFLRAHHSVDQRTQPCKSLWTPAMAAEAYAYQPDFCATCI---VWGTVPLC 333
            P   G+C +    I  +DPR FGP  W+  H+ A N+P  P     QAC +F+ ALPY++PC  CG+  GEFI  NI++     P C    + +QD   PC++P +AC +  +L +FF RAH++V+  T PC+  +T   A + Y   P+   TC+   VWG+  LC
Sbjct:   50 PNSTGSCATKDNHIGTTDPRVFGPSLWRAFHLIAANFPSPPTDAAHQACVNFVMALPYLVPCRHCGWDLGEFIKRNIQNDTISDPGCFGFSEETQDFTEPCESPERACTSTYNLTSFFARAHNNVNSHTNPCRKPYTTKDALQQYLAAPE--GTCLHNTVWGSKQLC 214          

HSP 2 Score: 117.087 bits (292), Expect = 1.039e-25
Identity = 61/152 (40.13%), Postives = 84/152 (55.26%), Query Frame = 0
Query:  399 TGDPRVFGPYTWRTVHRFAQFYPIDPTTEVQEACVNFINALPFLLPCPHCGHDFVNFIVANLENAGTFNAAC----AANVTYGMPCESLEQACATRPNLVSFFLRAHHNVDRNNKPCKPLWSREEAVDAF-AVMTNFCATDGVSAGYELCRG 545
            T DPRVFGP  WR  H  A  +P  PT    +ACVNF+ ALP+L+PC HCG D   FI  N++N    +  C         +  PCES E+AC +  NL SFF RAH+NV+ +  PC+  ++ ++A+  + A     C  + V    +LC G
Sbjct:   65 TTDPRVFGPSLWRAFHLIAANFPSPPTDAAHQACVNFVMALPYLVPCRHCGWDLGEFIKRNIQNDTISDPGCFGFSEETQDFTEPCESPERACTSTYNLTSFFARAHNNVNSHTNPCRKPYTTKDALQQYLAAPEGTCLHNTVWGSKQLCTG 216          
The following BLAST results are available for this feature:
BLAST of EWM26035.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 4
Match NameE-valueIdentityDescription
gi|585107958|gb|EWM26035.1|0.000e+0100.00sulphydryl oxidase [Nannochloropsis gaditana][more]
gi|551611665|ref|XP_005786913.1|3.042e-3443.13hypothetical protein EMIHUDRAFT_363535 [Emiliania ... [more]
gi|551577146|ref|XP_005774216.1|2.023e-3342.50hypothetical protein EMIHUDRAFT_435722 [Emiliania ... [more]
gi|551555351|ref|XP_005764872.1|5.982e-2938.32hypothetical protein EMIHUDRAFT_213712 [Emiliania ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4649rna4649Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications