EWM26062.1, cds4612 (CDS) Nannochloropsis gaditana

Overview
NameEWM26062.1
Unique Namecds4612
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1085756..1087003 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26062.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100850g2.5854.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1085756..1087003 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|585108022|gb|EWM26062.1| (hypothetical protein Naga_100850g2 [Nannochloropsis gaditana])

HSP 1 Score: 858.981 bits (2218), Expect = 0.000e+0
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0
Query:    1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPVRARRPHFSIQ 415
            MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPVRARRPHFSIQ
Sbjct:    1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPVRARRPHFSIQ 415          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|553193590|ref|XP_005855803.1| (peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422293258|gb|EKU20558.1| peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query:    1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP 404
            MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP
Sbjct:    1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP 404          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1209849761|dbj|GAX46227.1| (hypothetical protein NIES4075_72480 [Tolypothrix sp. NIES-4075])

HSP 1 Score: 106.686 bits (265), Expect = 3.542e-23
Identity = 71/219 (32.42%), Postives = 118/219 (53.88%), Query Frame = 0
Query:  175 FLRGFYKMSWKGTDPYQGPDDTNVGVTFTG-RLPGDPQANIAPMTSDAI--NLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDW---VGFSAAWTTASTP-IAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSN 386
             ++G++  ++  + P+   D   +G+ F+G   P    ++ A + +  +    +S GGGN  G+++   + ++   +++       Y GI  D EE   G++     +   F A K KNL ++VTTSH +PYG+ +   ++ ++  N NIDYLSPQLYTSGTE +ND+    G S      S P I PSIVQA+ Y    +N  + +  N KG++ W+N
Sbjct:   12 LIKGYWDKTYSPSHPF---DHATLGIAFSGWANPDKALSDSAEIKNRLVGHKYISLGGGNNNGSFTQEILHSI--ITHIKNGKFSDYRGIAFDIEE---GEANLTSHFEHAFTAAKNKNLKVLVTTSHSAPYGIPDAQMMMKNFFRNENIDYLSPQLYTSGTETENDFQTSQGVSWEDYAHSKPAIVPSIVQANMYHD-AKNRFSRHQVNTKGFIQWAN 221          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1180425968|ref|WP_083943443.1| (hypothetical protein [Rhizobium taibaishanense] >gi|1129119246|gb|OLP47601.1| hypothetical protein BJF91_04165 [Rhizobium taibaishanense])

HSP 1 Score: 106.301 bits (264), Expect = 4.295e-22
Identity = 73/229 (31.88%), Postives = 117/229 (51.09%), Query Frame = 0
Query:  165 LETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINL-----LSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSA----AWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVW 384
            L+T+ +  PA   G++  +W        P +  +G+ F+G    DP   +A   +   NL     ++ GGGN+ G++SV  ++++ S          +  GI  D EE +SG S     +   F+  KA +L ++VT SH +P+G+++   L+A + S+ NID+LSPQLYTSG+E  NDW         A+  A   I PSI  A+ YD   + +   +     GY+VW
Sbjct:  123 LDTTSSTTPAENIGYWDKTWH---RVAAPANATMGLAFSGY--SDPSKALAQSATVIANLAGVKYITLGGGNQDGSFSVPILDSINSAIRHGAFSHCQ--GIAYDVEEGSSGLSA---AFRNSFSIAKAASLSVLVTVSHSTPFGVADAKTLMASFFSDANIDFLSPQLYTSGSETSNDWATSGGVTWDAYKDAKAAIVPSITHANLYDN-AQATFAHHQVKTAGYIVW 340          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1210252098|dbj|BAZ71107.1| (hypothetical protein NIES4106_59040 (plasmid) [Fischerella sp. NIES-4106])

HSP 1 Score: 102.834 bits (255), Expect = 8.219e-22
Identity = 68/219 (31.05%), Postives = 121/219 (55.25%), Query Frame = 0
Query:  175 FLRGFYKMSWKGTDPYQGPDDTNVGVTFTG-RLPGDPQANIAPMTSDAI--NLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWV---GFSAAWTTASTP-IAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSN 386
             ++G++  ++  + P+   + + +G+ F+G   P    ++ A + +  +    +S GGGN  G+++   + ++   +++       Y GI  D EE   G++    ++   FAA K KN  ++VTTSH +PYG+ +   ++ +++ N NIDYLSPQLYTSGTE +ND+    G S      S P I PSIV+A+ Y +  +N  + +    KG++ W+N
Sbjct:   13 LIKGYWNKTYSPSHPF---NHSTLGIAFSGWAKPDKALSDSAEIKNRLVGHKYISLGGGNSNGSFTQQILHSI--ITHIKNGKFSDYRGIAFDIEE---GEANLTSDFEHAFAAAKNKNFKVLVTTSHSAPYGIPDARTMMKNFIKNENIDYLSPQLYTSGTETENDFATSQGVSWEDYAHSKPVIVPSIVRANMY-RDAKNRFSRHGVTTKGFIQWAN 222          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1039160139|gb|OBQ05553.1| (hypothetical protein AN482_16220 [Anabaena sp. LE011-02])

HSP 1 Score: 92.4337 bits (228), Expect = 4.111e-18
Identity = 70/225 (31.11%), Postives = 113/225 (50.22%), Query Frame = 0
Query:  177 RGFYKMSWKGTDPYQGPD--DTNVGVTFTG------RLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAA----WTTASTPIAPSIVQASYYDQLGENSVTVYLPN----AKGYLVWS 385
            RG+++ +W+     Q  D  D N+G+ F+G       L G     I  +  D    +S GGGN  G ++ + ++A+ +     +    +Y GI  D EE   G S   + +   FAA +A N  ++VT SH +PYG+++   L+  + ++ NI++LSPQLYT+GTE +N++   +      +T A   + PS+V A  Y    E     YL N      GY+ WS
Sbjct:    5 RGYWRRTWE-----QSGDLPDANIGIAFSGWAAWENALQGSANV-IGSLRGD--KYISLGGGNANGRFTSSLLQAITTAIQSGQFA--EYQGIAYDVEE---GDSGLEQVFRDSFAAARAANFKVLVTVSHSAPYGITDALQLMMSFFNDQNINFLSPQLYTNGTETENNYETTAGVLWSHYTQAQALVIPSVVTADLYSSGRE-----YLANQGVTTHGYIQWS 211          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1039799404|ref|WP_064967744.1| (hypothetical protein [Tenacibaculum ovolyticum])

HSP 1 Score: 92.4337 bits (228), Expect = 4.448e-18
Identity = 72/221 (32.58%), Postives = 110/221 (49.77%), Query Frame = 0
Query:  178 GFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAIN---LLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLK------YDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAA----WTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWS 385
            G++  +W+ TD  Q P+ T + + F+G        N +    D ++    +S GGGNE GA++   +E++         +S++      YDGI  D EE   G+S     +   F A K K L ++VT SH +PYG+S+   L+  +  N NID +SPQLYT+G E +ND+          +      I PSIV+AS Y    E    + L   +GY+ WS
Sbjct:    9 GYWNWTWE-TDN-QSPEGTTLSIAFSGYSNAQEAINNSLSKKDKLSGEKYISVGGGNEAGAFTQNILESL--------TLSIQNGDFEGYDGIAYDVEE---GESGLENYFAASFQAAKNKGLKVLVTVSHSAPYGISDARELMYSFFLNENIDIISPQLYTTGQELENDYDTSQGVLWNDYENCKAAIVPSIVKASMYINAQEYFARLGLT-LQGYIQWS 215          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1079402948|ref|WP_070167394.1| (hypothetical protein [Agrobacterium vitis] >gi|1078776965|gb|OFE24421.1| hypothetical protein BBI04_24965 [Agrobacterium vitis] >gi|1095612164|gb|OHZ06867.1| hypothetical protein BBK84_25965 [Agrobacterium vitis] >gi|1095633284|gb|OHZ27414.1| hypothetical protein BBK95_18380 [Agrobacterium vitis])

HSP 1 Score: 94.7449 bits (234), Expect = 6.859e-18
Identity = 63/217 (29.03%), Postives = 111/217 (51.15%), Query Frame = 0
Query:  178 GFYKMSWKGTDPYQGPDDTNVGVTFTGRL-PGDPQANIAPMTSDAI--NLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDW-VGFSAAWT---TASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNT 387
            G++  +W       GP +T + + F+G   P    A  AP+    +    ++ GGGN  G +S + ++++  ++ +       Y GI  D EE   G S     ++  FA  +A    ++VT SH +P+G+++  +L+  +  + NID LSPQLYT+G EP NDW       W+   TA   + PSIV A+ Y  + +++  ++     GY++W+ +
Sbjct:  128 GYWHKTWHRA---AGPSNTTMDLAFSGYSNPTKALAQSAPILPSLVGEKYITLGGGNASGRFSASTLQSI--DACIKSGAFSAYKGIAYDIEEGNRGLS---GAFHQSFANARAAGFKVLVTVSHSAPFGIADAKSLMFAFFDDANIDILSPQLYTTGEEPSNDWTTSHGVTWSDYATAKAQVVPSIVHANLYPNV-QSTFKIHDVTPNGYILWAGS 335          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1199201632|gb|OUR69861.1| (hypothetical protein A9Q77_08105 [Marinomonas sp. 42_23_T18])

HSP 1 Score: 92.8189 bits (229), Expect = 2.231e-17
Identity = 69/222 (31.08%), Postives = 115/222 (51.80%), Query Frame = 0
Query:  178 GFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINL-----LSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWV---GFS-AAWTTASTPIAPSIVQASYY----DQLGENSVTVYLPNAKGYLVWSN 386
            G++  +W+G +    P +  + + F+G +  D ++ +    +   NL     +S+GGGNE GA+  A +  +     +N+    +YDGI  D EE  SG     +++ T F A KAK   ++VT SH +PY +S+ + L+  +  + NID LSPQLYT+G E +N++    G + A + T    I PS+V  S Y        +  VT+     +GY+ W +
Sbjct:  129 GYWDCTWQGGN---APSNATLSLAFSGWV--DVKSALEDSNTVLNNLVGCKYISFGGGNENGAFDSANLADL--TDAINQGALKQYDGIAYDVEEGVSGLE---DDFKTSFKAAKAKGFNVLVTISHSAPYDISDASLLMDSFFDDANIDILSPQLYTTGEETENNYETSHGVNWARYATCKAAIVPSLVTGSLYPSAQSYFSQQGVTL-----QGYIQWKH 335          
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1148811702|ref|WP_077537471.1| (hypothetical protein [Pseudoalteromonas aliena] >gi|1146065536|gb|AQQ00794.1| hypothetical protein B0W48_13830 [Pseudoalteromonas aliena])

HSP 1 Score: 91.2781 bits (225), Expect = 9.637e-17
Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 0
Query:  193 PDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLS-----YGGGNEFGAWSVAAVEAVGSESNLNEVISLK-YDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAA----WTTASTPIAPSIVQASYYDQ----LGENSVTVYLPNAKGYLVWSNT 387
            P++  + + F+G    DPQ  I   T     L+      +GGGNE GA++   +  +   +N  E   L+ YDGI  D EE   G S   + + T F   K     + VT SH +PYG+++   L+A  L++ NIDY+SPQLYT+G+E  ND+          +      + PSIV++ YY        +  VT+      GY+ W  T
Sbjct:  141 PNNATLSIAFSGY--ADPQEAINNATGIESTLVGSKFICFGGGNEKGAFNGDILNDI---TNAIEAGKLQAYDGIAFDIEE---GDSGLADYFQTAFKTAKQIGFQVFVTVSHSAPYGIADAKELMAVLLADENIDYISPQLYTTGSEDGNDYDTSQGVTWKDYANCKAAVVPSIVKSEYYTSAQTYFKQQGVTL-----SGYIQWQQT 336          
The following BLAST results are available for this feature:
BLAST of EWM26062.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108022|gb|EWM26062.1|0.000e+0100.00hypothetical protein Naga_100850g2 [Nannochloropsi... [more]
gi|553193590|ref|XP_005855803.1|0.000e+0100.00peptidoglycan-binding lysin domain containing prot... [more]
gi|1209849761|dbj|GAX46227.1|3.542e-2332.42hypothetical protein NIES4075_72480 [Tolypothrix s... [more]
gi|1180425968|ref|WP_083943443.1|4.295e-2231.88hypothetical protein [Rhizobium taibaishanense] >g... [more]
gi|1210252098|dbj|BAZ71107.1|8.219e-2231.05hypothetical protein NIES4106_59040 (plasmid) [Fis... [more]
gi|1039160139|gb|OBQ05553.1|4.111e-1831.11hypothetical protein AN482_16220 [Anabaena sp. LE0... [more]
gi|1039799404|ref|WP_064967744.1|4.448e-1832.58hypothetical protein [Tenacibaculum ovolyticum][more]
gi|1079402948|ref|WP_070167394.1|6.859e-1829.03hypothetical protein [Agrobacterium vitis] >gi|107... [more]
gi|1199201632|gb|OUR69861.1|2.231e-1731.08hypothetical protein A9Q77_08105 [Marinomonas sp. ... [more]
gi|1148811702|ref|WP_077537471.1|9.637e-1732.06hypothetical protein [Pseudoalteromonas aliena] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4624rna4624Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications