EWM26062.1, cds4612 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|585108022|gb|EWM26062.1| (hypothetical protein Naga_100850g2 [Nannochloropsis gaditana]) HSP 1 Score: 858.981 bits (2218), Expect = 0.000e+0 Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0
Query: 1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPVRARRPHFSIQ 415
MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPVRARRPHFSIQ
Sbjct: 1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFPVRARRPHFSIQ 415
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|553193590|ref|XP_005855803.1| (peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422293258|gb|EKU20558.1| peptidoglycan-binding lysin domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0 Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query: 1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP 404
MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP
Sbjct: 1 MRASITIAGFLAVLVSTASAYRAPQARNSCLKTCLVPYGTNATRTIKTICRRACKVAAPLRGSCRKTTNTFWRNQTKVCRQSIRRIKQGLPPLTSLVSHTTPANASSDIPTVTQYTYEATCLKEIKFEWKDAKQTCREILCPDGQYWNVEADACVVNTFVNLSVLETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAAWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNTPPPQPGPTPSCVSGYFP 404
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1209849761|dbj|GAX46227.1| (hypothetical protein NIES4075_72480 [Tolypothrix sp. NIES-4075]) HSP 1 Score: 106.686 bits (265), Expect = 3.542e-23 Identity = 71/219 (32.42%), Postives = 118/219 (53.88%), Query Frame = 0
Query: 175 FLRGFYKMSWKGTDPYQGPDDTNVGVTFTG-RLPGDPQANIAPMTSDAI--NLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDW---VGFSAAWTTASTP-IAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSN 386
++G++ ++ + P+ D +G+ F+G P ++ A + + + +S GGGN G+++ + ++ +++ Y GI D EE G++ + F A K KNL ++VTTSH +PYG+ + ++ ++ N NIDYLSPQLYTSGTE +ND+ G S S P I PSIVQA+ Y +N + + N KG++ W+N
Sbjct: 12 LIKGYWDKTYSPSHPF---DHATLGIAFSGWANPDKALSDSAEIKNRLVGHKYISLGGGNNNGSFTQEILHSI--ITHIKNGKFSDYRGIAFDIEE---GEANLTSHFEHAFTAAKNKNLKVLVTTSHSAPYGIPDAQMMMKNFFRNENIDYLSPQLYTSGTETENDFQTSQGVSWEDYAHSKPAIVPSIVQANMYHD-AKNRFSRHQVNTKGFIQWAN 221
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1180425968|ref|WP_083943443.1| (hypothetical protein [Rhizobium taibaishanense] >gi|1129119246|gb|OLP47601.1| hypothetical protein BJF91_04165 [Rhizobium taibaishanense]) HSP 1 Score: 106.301 bits (264), Expect = 4.295e-22 Identity = 73/229 (31.88%), Postives = 117/229 (51.09%), Query Frame = 0
Query: 165 LETSGALDPAFLRGFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINL-----LSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSA----AWTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVW 384
L+T+ + PA G++ +W P + +G+ F+G DP +A + NL ++ GGGN+ G++SV ++++ S + GI D EE +SG S + F+ KA +L ++VT SH +P+G+++ L+A + S+ NID+LSPQLYTSG+E NDW A+ A I PSI A+ YD + + + GY+VW
Sbjct: 123 LDTTSSTTPAENIGYWDKTWH---RVAAPANATMGLAFSGY--SDPSKALAQSATVIANLAGVKYITLGGGNQDGSFSVPILDSINSAIRHGAFSHCQ--GIAYDVEEGSSGLSA---AFRNSFSIAKAASLSVLVTVSHSTPFGVADAKTLMASFFSDANIDFLSPQLYTSGSETSNDWATSGGVTWDAYKDAKAAIVPSITHANLYDN-AQATFAHHQVKTAGYIVW 340
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1210252098|dbj|BAZ71107.1| (hypothetical protein NIES4106_59040 (plasmid) [Fischerella sp. NIES-4106]) HSP 1 Score: 102.834 bits (255), Expect = 8.219e-22 Identity = 68/219 (31.05%), Postives = 121/219 (55.25%), Query Frame = 0
Query: 175 FLRGFYKMSWKGTDPYQGPDDTNVGVTFTG-RLPGDPQANIAPMTSDAI--NLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWV---GFSAAWTTASTP-IAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSN 386
++G++ ++ + P+ + + +G+ F+G P ++ A + + + +S GGGN G+++ + ++ +++ Y GI D EE G++ ++ FAA K KN ++VTTSH +PYG+ + ++ +++ N NIDYLSPQLYTSGTE +ND+ G S S P I PSIV+A+ Y + +N + + KG++ W+N
Sbjct: 13 LIKGYWNKTYSPSHPF---NHSTLGIAFSGWAKPDKALSDSAEIKNRLVGHKYISLGGGNSNGSFTQQILHSI--ITHIKNGKFSDYRGIAFDIEE---GEANLTSDFEHAFAAAKNKNFKVLVTTSHSAPYGIPDARTMMKNFIKNENIDYLSPQLYTSGTETENDFATSQGVSWEDYAHSKPVIVPSIVRANMY-RDAKNRFSRHGVTTKGFIQWAN 222
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1039160139|gb|OBQ05553.1| (hypothetical protein AN482_16220 [Anabaena sp. LE011-02]) HSP 1 Score: 92.4337 bits (228), Expect = 4.111e-18 Identity = 70/225 (31.11%), Postives = 113/225 (50.22%), Query Frame = 0
Query: 177 RGFYKMSWKGTDPYQGPD--DTNVGVTFTG------RLPGDPQANIAPMTSDAINLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAA----WTTASTPIAPSIVQASYYDQLGENSVTVYLPN----AKGYLVWS 385
RG+++ +W+ Q D D N+G+ F+G L G I + D +S GGGN G ++ + ++A+ + + +Y GI D EE G S + + FAA +A N ++VT SH +PYG+++ L+ + ++ NI++LSPQLYT+GTE +N++ + +T A + PS+V A Y E YL N GY+ WS
Sbjct: 5 RGYWRRTWE-----QSGDLPDANIGIAFSGWAAWENALQGSANV-IGSLRGD--KYISLGGGNANGRFTSSLLQAITTAIQSGQFA--EYQGIAYDVEE---GDSGLEQVFRDSFAAARAANFKVLVTVSHSAPYGITDALQLMMSFFNDQNINFLSPQLYTNGTETENNYETTAGVLWSHYTQAQALVIPSVVTADLYSSGRE-----YLANQGVTTHGYIQWS 211
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1039799404|ref|WP_064967744.1| (hypothetical protein [Tenacibaculum ovolyticum]) HSP 1 Score: 92.4337 bits (228), Expect = 4.448e-18 Identity = 72/221 (32.58%), Postives = 110/221 (49.77%), Query Frame = 0
Query: 178 GFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAIN---LLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLK------YDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAA----WTTASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWS 385
G++ +W+ TD Q P+ T + + F+G N + D ++ +S GGGNE GA++ +E++ +S++ YDGI D EE G+S + F A K K L ++VT SH +PYG+S+ L+ + N NID +SPQLYT+G E +ND+ + I PSIV+AS Y E + L +GY+ WS
Sbjct: 9 GYWNWTWE-TDN-QSPEGTTLSIAFSGYSNAQEAINNSLSKKDKLSGEKYISVGGGNEAGAFTQNILESL--------TLSIQNGDFEGYDGIAYDVEE---GESGLENYFAASFQAAKNKGLKVLVTVSHSAPYGISDARELMYSFFLNENIDIISPQLYTTGQELENDYDTSQGVLWNDYENCKAAIVPSIVKASMYINAQEYFARLGLT-LQGYIQWS 215
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1079402948|ref|WP_070167394.1| (hypothetical protein [Agrobacterium vitis] >gi|1078776965|gb|OFE24421.1| hypothetical protein BBI04_24965 [Agrobacterium vitis] >gi|1095612164|gb|OHZ06867.1| hypothetical protein BBK84_25965 [Agrobacterium vitis] >gi|1095633284|gb|OHZ27414.1| hypothetical protein BBK95_18380 [Agrobacterium vitis]) HSP 1 Score: 94.7449 bits (234), Expect = 6.859e-18 Identity = 63/217 (29.03%), Postives = 111/217 (51.15%), Query Frame = 0
Query: 178 GFYKMSWKGTDPYQGPDDTNVGVTFTGRL-PGDPQANIAPMTSDAI--NLLSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDW-VGFSAAWT---TASTPIAPSIVQASYYDQLGENSVTVYLPNAKGYLVWSNT 387
G++ +W GP +T + + F+G P A AP+ + ++ GGGN G +S + ++++ ++ + Y GI D EE G S ++ FA +A ++VT SH +P+G+++ +L+ + + NID LSPQLYT+G EP NDW W+ TA + PSIV A+ Y + +++ ++ GY++W+ +
Sbjct: 128 GYWHKTWHRA---AGPSNTTMDLAFSGYSNPTKALAQSAPILPSLVGEKYITLGGGNASGRFSASTLQSI--DACIKSGAFSAYKGIAYDIEEGNRGLS---GAFHQSFANARAAGFKVLVTVSHSAPFGIADAKSLMFAFFDDANIDILSPQLYTTGEEPSNDWTTSHGVTWSDYATAKAQVVPSIVHANLYPNV-QSTFKIHDVTPNGYILWAGS 335
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1199201632|gb|OUR69861.1| (hypothetical protein A9Q77_08105 [Marinomonas sp. 42_23_T18]) HSP 1 Score: 92.8189 bits (229), Expect = 2.231e-17 Identity = 69/222 (31.08%), Postives = 115/222 (51.80%), Query Frame = 0
Query: 178 GFYKMSWKGTDPYQGPDDTNVGVTFTGRLPGDPQANIAPMTSDAINL-----LSYGGGNEFGAWSVAAVEAVGSESNLNEVISLKYDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWV---GFS-AAWTTASTPIAPSIVQASYY----DQLGENSVTVYLPNAKGYLVWSN 386
G++ +W+G + P + + + F+G + D ++ + + NL +S+GGGNE GA+ A + + +N+ +YDGI D EE SG +++ T F A KAK ++VT SH +PY +S+ + L+ + + NID LSPQLYT+G E +N++ G + A + T I PS+V S Y + VT+ +GY+ W +
Sbjct: 129 GYWDCTWQGGN---APSNATLSLAFSGWV--DVKSALEDSNTVLNNLVGCKYISFGGGNENGAFDSANLADL--TDAINQGALKQYDGIAYDVEEGVSGLE---DDFKTSFKAAKAKGFNVLVTISHSAPYDISDASLLMDSFFDDANIDILSPQLYTTGEETENNYETSHGVNWARYATCKAAIVPSLVTGSLYPSAQSYFSQQGVTL-----QGYIQWKH 335
BLAST of EWM26062.1 vs. NCBI_GenBank
Match: gi|1148811702|ref|WP_077537471.1| (hypothetical protein [Pseudoalteromonas aliena] >gi|1146065536|gb|AQQ00794.1| hypothetical protein B0W48_13830 [Pseudoalteromonas aliena]) HSP 1 Score: 91.2781 bits (225), Expect = 9.637e-17 Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 0
Query: 193 PDDTNVGVTFTGRLPGDPQANIAPMTSDAINLLS-----YGGGNEFGAWSVAAVEAVGSESNLNEVISLK-YDGIVIDAEEYASGQSVTVEEWNTMFAAIKAKNLMLIVTTSHFSPYGMSNGAALIADWLSNPNIDYLSPQLYTSGTEPQNDWVGFSAA----WTTASTPIAPSIVQASYYDQ----LGENSVTVYLPNAKGYLVWSNT 387
P++ + + F+G DPQ I T L+ +GGGNE GA++ + + +N E L+ YDGI D EE G S + + T F K + VT SH +PYG+++ L+A L++ NIDY+SPQLYT+G+E ND+ + + PSIV++ YY + VT+ GY+ W T
Sbjct: 141 PNNATLSIAFSGY--ADPQEAINNATGIESTLVGSKFICFGGGNEKGAFNGDILNDI---TNAIEAGKLQAYDGIAFDIEE---GDSGLADYFQTAFKTAKQIGFQVFVTVSHSAPYGIADAKELMAVLLADENIDYISPQLYTTGSEDGNDYDTSQGVTWKDYANCKAAVVPSIVKSEYYTSAQTYFKQQGVTL-----SGYIQWQQT 336 The following BLAST results are available for this feature:
BLAST of EWM26062.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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