EWM26069.1, cds4604 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|585108050|gb|EWM26069.1| (bisphosphoglycerate-dependent phosphoglycerate mutase [Nannochloropsis gaditana]) HSP 1 Score: 425.246 bits (1092), Expect = 1.061e-150 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query: 1 MCQRSRLRKVALYPTIAWSKESTHVERRPGRRWNRDCVAGFLALMAFLGRGDRVVLAFSLPSVHRAHADHQAFHRNVYISHPTPSRTAQPFPPASPPLFVSRKDHASEGNPWHYRLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVRRGEGVRMVIVYGLPAVAFCVKAGNGVGNATP 206
MCQRSRLRKVALYPTIAWSKESTHVERRPGRRWNRDCVAGFLALMAFLGRGDRVVLAFSLPSVHRAHADHQAFHRNVYISHPTPSRTAQPFPPASPPLFVSRKDHASEGNPWHYRLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVRRGEGVRMVIVYGLPAVAFCVKAGNGVGNATP
Sbjct: 1 MCQRSRLRKVALYPTIAWSKESTHVERRPGRRWNRDCVAGFLALMAFLGRGDRVVLAFSLPSVHRAHADHQAFHRNVYISHPTPSRTAQPFPPASPPLFVSRKDHASEGNPWHYRLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVRRGEGVRMVIVYGLPAVAFCVKAGNGVGNATP 206
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|647564817|ref|WP_025843290.1| (phosphoglyceromutase [Porphyromonas gingivicanis] >gi|700248027|gb|KGN97067.1| phosphoglyceromutase [Porphyromonas gingivicanis]) HSP 1 Score: 86.2705 bits (212), Expect = 4.899e-17 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0
Query: 115 RLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVR 175
RL+LLRHGESVWN++ R+ GWTDV L+E+G EA AG++LR +G R + +TSYLKR V+
Sbjct: 3 RLVLLRHGESVWNKENRFTGWTDVDLSEKGVEEAHKAGKLLRSEGFRFAKAYTSYLKRAVK 63
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|754520247|ref|WP_041930910.1| (phosphoglyceromutase [Pantoea ananatis]) HSP 1 Score: 85.5001 bits (210), Expect = 6.545e-17 Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query: 116 LILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCV 174
LILLRHGES WNR+ R+ GWTDVPLT+RG +EA AG +LR+ GL P +VFTS + RCV
Sbjct: 6 LILLRHGESQWNRENRFTGWTDVPLTDRGRQEADRAGDVLREAGLLPDRVFTSVMTRCV 64
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|502964838|ref|WP_013199814.1| (MULTISPECIES: phosphoglyceromutase [Erwiniaceae] >gi|410688949|ref|YP_006962482.1| Phosphoglycerate mutase (plasmid) [Erwinia amylovora] >gi|299060191|emb|CAX53382.1| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (plasmid) [Erwinia billingiae Eb661] >gi|385268458|gb|AFI56320.1| Phosphoglycerate mutase (plasmid) [Erwinia amylovora] >gi|768328977|gb|KJH60917.1| phosphoglyceromutase [Pantoea ananatis]) HSP 1 Score: 85.1149 bits (209), Expect = 8.717e-17 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 116 LILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCV 174
LILLRHGES WNR+ R+ GWTDVPLT+RG +EA AG +LR GL P +VFTS + RCV
Sbjct: 6 LILLRHGESQWNRENRFTGWTDVPLTDRGRQEADRAGDVLRDAGLLPDRVFTSVMTRCV 64
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|327395183|dbj|BAK12605.1| (3-bisphosphoglycerate-dependent phosphoglycerate mutase [Pantoea ananatis AJ13355]) HSP 1 Score: 85.8853 bits (211), Expect = 9.021e-17 Identity = 46/100 (46.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query: 75 RNVYISHPTPSRTAQPFPPASPPLFVSRKDHASEGNPWHYRLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCV 174
RN P AQP P++ LILLRHGES WNR+ R+ GWTDVPLT+RG +EA AG +LR+ GL P +VFTS + RCV
Sbjct: 11 RNRSAGRPAAGTGAQPLAPST--------------------LILLRHGESQWNRENRFTGWTDVPLTDRGRQEADRAGDVLREAGLLPDRVFTSVMTRCV 90
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|308056993|gb|ADO09165.1| (Phosphoglycerate mutase 1 [Pantoea vagans C9-1]) HSP 1 Score: 83.9593 bits (206), Expect = 9.235e-17 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 116 LILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCV 174
LILLRHGES WNR+ R+ GWTDVPLT+RG +EA AG +LR GL P +VFTS + RCV
Sbjct: 28 LILLRHGESQWNRENRFTGWTDVPLTDRGRQEADRAGDVLRDAGLLPDRVFTSVMTRCV 86
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|1053717190|ref|WP_066041184.1| (phosphoglyceromutase [Bacteroidales bacterium KA00251] >gi|987321796|gb|KXB35810.1| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Bacteroidales bacterium KA00251]) HSP 1 Score: 85.5001 bits (210), Expect = 1.013e-16 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 0
Query: 115 RLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVR 175
+LIL+RHGES WN++ R+ GWTDV LT++G EA AGR+L+Q+G R FTSYLKR ++
Sbjct: 3 KLILIRHGESAWNKENRFTGWTDVDLTDKGVAEAHEAGRLLKQEGFRFAVAFTSYLKRAIK 63
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|366040067|gb|AEX08444.1| (Phosphoglycerate mutase 1 (plasmid) [Erwinia amylovora ACW56400]) HSP 1 Score: 85.1149 bits (209), Expect = 1.420e-16 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0
Query: 116 LILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCV 174
LILLRHGES WNR+ R+ GWTDVPLT+RG +EA AG +LR GL P +VFTS + RCV
Sbjct: 32 LILLRHGESQWNRENRFTGWTDVPLTDRGRQEADRAGDVLRDAGLLPDRVFTSVMTRCV 90
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|298705594|emb|CBJ28845.1| (phosphoglycerate mutase [Ectocarpus siliculosus]) HSP 1 Score: 85.5001 bits (210), Expect = 1.591e-16 Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0
Query: 114 YRLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVR 175
+R++ LRHGES WNRD R+IGWTDVPLTE+GE EA AGR LR++G VF S LKR ++
Sbjct: 22 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLK 83
BLAST of EWM26069.1 vs. NCBI_GenBank
Match: gi|1154823167|ref|WP_078736568.1| (phosphoglyceromutase [Porphyromonas circumdentaria] >gi|1152073988|emb|SJZ61184.1| phosphoglycerate mutase [Porphyromonas circumdentaria]) HSP 1 Score: 83.5741 bits (205), Expect = 4.326e-16 Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 0
Query: 115 RLILLRHGESVWNRDGRYIGWTDVPLTERGEREAQAAGRMLRQQGLRPCQVFTSYLKRCVR 175
RL+LLRHGESVWN++ R+ GWTDV L+E+G EA AG++LR +G + +TSYLKR V+
Sbjct: 3 RLVLLRHGESVWNKENRFTGWTDVDLSEKGVEEAHKAGKLLRAEGFHFAKAYTSYLKRAVK 63 The following BLAST results are available for this feature:
BLAST of EWM26069.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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