EWM26072.1, cds4599 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|585108060|gb|EWM26072.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 897.501 bits (2318), Expect = 0.000e+0 Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0 Query: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKVSKRKEGRSERNKEKRKGVDDRVRVEQG 436 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKVSKRKEGRSERNKEKRKGVDDRVRVEQG Sbjct: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKVSKRKEGRSERNKEKRKGVDDRVRVEQG 436
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|585108059|gb|EWM26071.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0 Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0 Query: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK 408 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK Sbjct: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK 408
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|553182461|ref|XP_005853731.1| (hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526] >gi|553186167|ref|XP_005854371.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422294686|gb|EKU21986.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422295328|gb|EKU22627.1| hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 487.263 bits (1253), Expect = 1.790e-168 Identity = 236/240 (98.33%), Postives = 238/240 (99.17%), Query Frame = 0 Query: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSI 240 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFAN+MAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLM + Sbjct: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANMMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMGDL 240 HSP 2 Score: 166.392 bits (420), Expect = 1.567e-43 Identity = 84/107 (78.50%), Postives = 86/107 (80.37%), Query Frame = 0 Query: 334 GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKVS--------------KRKEGRSERNKEKRKG 426 GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKVS KR R + EK+KG Sbjct: 238 GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKVSLQVNVSVNAPIEGYKRNSSRVAVSHEKKKG 344
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|585109123|gb|EWM26963.1| (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 178.718 bits (452), Expect = 1.875e-49 Identity = 100/266 (37.59%), Postives = 155/266 (58.27%), Query Frame = 0 Query: 56 QIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPA-AAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWR----FQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDI 315 ++ +++ AL+IL +V IP + + A VYAWI QY YT +DWQRCLV PN+ G D+T + +AA++A + VF+I+ F G+ D D+LPY+LF + +LG+ VYRE+ PIQP+P+ +SATL+TL K+I P MY+ PA + P+ C+ A+ N+ FL+ Q ++++L +F ++A Y I R +L L L+ + GY+ AKE VA T+ VL ES+L +F F K ++ + Sbjct: 15 EVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKG----GFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLF------SIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGM 270
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|585102066|gb|EWM21737.1| (hypothetical protein Naga_100270g4 [Nannochloropsis gaditana]) HSP 1 Score: 184.496 bits (467), Expect = 1.604e-48 Identity = 117/364 (32.14%), Postives = 194/364 (53.30%), Query Frame = 0 Query: 12 ARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQI----QDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYN 365 SP P G+ +S++ R SG ++S ++D + + + L LR LF V +PL+I+ +AC+Y WIF N +Y +D WQRC+VY + A N+ ++A+++ G +F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F V+VL + F + A YR + + R+ L + L L+ +A Y+ AKE A TL +L++ +F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ AY+ Sbjct: 72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH 419
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|553190289|ref|XP_005855162.1| (hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526] >gi|422293903|gb|EKU21203.1| hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.413 bits (324), Expect = 6.718e-30 Identity = 79/234 (33.76%), Postives = 130/234 (55.56%), Query Frame = 0 Query: 136 VFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYN 365 +F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F V+VL + F + A YR + + R+ L + L L+ +A Y+ AKE A TL +L++ +F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ AY+ Sbjct: 1 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH 227
BLAST of EWM26072.1 vs. NCBI_GenBank
Match: gi|585105799|gb|EWM24397.1| (hypothetical protein Naga_100283g1 [Nannochloropsis gaditana]) HSP 1 Score: 107.842 bits (268), Expect = 5.911e-24 Identity = 56/156 (35.90%), Postives = 89/156 (57.05%), Query Frame = 0 Query: 48 QRLARRYFQIQDRSLTALRILFVVGI-PLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNM 202 +RL RR + SL LRI+F + + PL I + F C+YA I+A + SY +DW +CL PN +G D + +A+++AG+ ++ ++V +G++D D L +S F ++ +LGI +YRE+ P P +S TL TL KYI P + Sbjct: 24 RRLHRRTSKASQESLKLLRIIFPLLVAPLCITSFIFTCLYAHIYAREGSYGPEDWPKCLTVPN-----IGNLHLDNNRFCTSASNFAGQAYLSLLVAAGGLQLGLRDNDYLLFSSFTCIVGLLGITIYRESYPYFLDPHFMSTTLFTLSKYIHPRI 174 The following BLAST results are available for this feature:
BLAST of EWM26072.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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