EWM26071.1, cds4598 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|585108059|gb|EWM26071.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 1114.37 bits (2881), Expect = 0.000e+0 Identity = 540/540 (100.00%), Postives = 540/540 (100.00%), Query Frame = 0
Query: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYANRDLPAQRLRLGTYIPDYLGGLQVNVSVNAPIEGYKRNSSRVAVSHEKKKGRTEVPYGVHYIRLPGEPEEEDTILGDRGAEEGKIKDENDNVVIGV 540
MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYANRDLPAQRLRLGTYIPDYLGGLQVNVSVNAPIEGYKRNSSRVAVSHEKKKGRTEVPYGVHYIRLPGEPEEEDTILGDRGAEEGKIKDENDNVVIGV
Sbjct: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYANRDLPAQRLRLGTYIPDYLGGLQVNVSVNAPIEGYKRNSSRVAVSHEKKKGRTEVPYGVHYIRLPGEPEEEDTILGDRGAEEGKIKDENDNVVIGV 540
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|585108060|gb|EWM26072.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 838.565 bits (2165), Expect = 0.000e+0 Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK 408
MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK
Sbjct: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK 408
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|553182461|ref|XP_005853731.1| (hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526] >gi|553186167|ref|XP_005854371.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422294686|gb|EKU21986.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422295328|gb|EKU22627.1| hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 487.263 bits (1253), Expect = 9.088e-167 Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLM 237
MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFAN+MAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLM
Sbjct: 1 MPLFSYGRRSDARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANMMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFPAAAKWAPASCSLAYALNKWFLIFQILVVVLM 237 HSP 2 Score: 160.999 bits (406), Expect = 1.223e-40 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 466 LQVNVSVNAPIEGYKRNSSRVAVSHEKKKGRTEVPYGVHYIRLPGEPEEEDTILGDRGAEEGKIKDENDNVVIGV 540
LQVNVSVNAPIEGYKRNSSRVAVSHEKKKGRTEVPYGVHYIRLPGEPEEEDTILGDRGAEEGKIKDENDNVVIGV
Sbjct: 315 LQVNVSVNAPIEGYKRNSSRVAVSHEKKKGRTEVPYGVHYIRLPGEPEEEDTILGDRGAEEGKIKDENDNVVIGV 389 HSP 3 Score: 159.458 bits (402), Expect = 4.586e-40 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 334 GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK 408
GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK
Sbjct: 238 GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPK 312
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|585102066|gb|EWM21737.1| (hypothetical protein Naga_100270g4 [Nannochloropsis gaditana]) HSP 1 Score: 203.371 bits (516), Expect = 2.022e-54 Identity = 138/449 (30.73%), Postives = 228/449 (50.78%), Query Frame = 0
Query: 12 ARSSPPPSGAGDANSSSSKRRIESGKKSSSKQTKEDQRLARRY----FQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPA-----YVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYAN 445
SP P G+ +S++ R SG ++S ++D + + L LR LF V +PL+I+ +AC+Y WIF N +Y +D WQRC+VY + A N+ ++A+++ G +F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F V+VL + F + A YR + + R+ L + L L+ +A Y+ AKE A TL +L++ +F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ AY+ Y + D D + A ++ AK+ ++P+ CR ++L+GQ QF HL + ACL ++ AN
Sbjct: 72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH--LYGFWTDAGCTHFLET---DTTHAGGANRQLLFLVAKN----KYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVAN 495
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|585109123|gb|EWM26963.1| (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 178.333 bits (451), Expect = 2.149e-48 Identity = 100/266 (37.59%), Postives = 155/266 (58.27%), Query Frame = 0
Query: 56 QIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPA-AAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWR----FQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDI 315
++ +++ AL+IL +V IP + + A VYAWI QY YT +DWQRCLV PN+ G D+T + +AA++A + VF+I+ F G+ D D+LPY+LF + +LG+ VYRE+ PIQP+P+ +SATL+TL K+I P MY+ PA + P+ C+ A+ N+ FL+ Q ++++L +F ++A Y I R +L L L+ + GY+ AKE VA T+ VL ES+L +F F K ++ +
Sbjct: 15 EVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKG----GFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLF------SIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGM 270
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|553190289|ref|XP_005855162.1| (hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526] >gi|422293903|gb|EKU21203.1| hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.058 bits (375), Expect = 2.116e-36 Identity = 100/319 (31.35%), Postives = 165/319 (51.72%), Query Frame = 0
Query: 136 VFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPA-----YVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYAN 445
+F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F V+VL + F + A YR + + R+ L + L L+ +A Y+ AKE A TL +L++ +F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ AY+ Y + D D + A ++ AK+ ++P+ CR ++L+GQ QF HL + ACL ++ AN
Sbjct: 1 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH--LYGFWTDAGCTHFLET---DTTHAGGANRQLLFLVAKN----KYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVAN 303
BLAST of EWM26071.1 vs. NCBI_GenBank
Match: gi|585105799|gb|EWM24397.1| (hypothetical protein Naga_100283g1 [Nannochloropsis gaditana]) HSP 1 Score: 107.071 bits (266), Expect = 2.216e-23 Identity = 56/164 (34.15%), Postives = 92/164 (56.10%), Query Frame = 0
Query: 40 SSKQTKEDQRLARRYFQIQDRSLTALRILFVVGI-PLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNM 202
+ + + +RL RR + SL LRI+F + + PL I + F C+YA I+A + SY +DW +CL PN +G D + +A+++AG+ ++ ++V +G++D D L +S F ++ +LGI +YRE+ P P +S TL TL KYI P +
Sbjct: 16 TCRSPELKRRLHRRTSKASQESLKLLRIIFPLLVAPLCITSFIFTCLYAHIYAREGSYGPEDWPKCLTVPN-----IGNLHLDNNRFCTSASNFAGQAYLSLLVAAGGLQLGLRDNDYLLFSSFTCIVGLLGITIYRESYPYFLDPHFMSTTLFTLSKYIHPRI 174 The following BLAST results are available for this feature:
BLAST of EWM26071.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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