EWM26156.1, cds4594 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26156.1 vs. NCBI_GenBank
Match: gi|585108150|gb|EWM26156.1| (hypothetical protein Naga_100014g85 [Nannochloropsis gaditana]) HSP 1 Score: 2173.67 bits (5631), Expect = 0.000e+0 Identity = 1066/1066 (100.00%), Postives = 1066/1066 (100.00%), Query Frame = 0
Query: 1 MTSQPVTAPSILSSSPSFDLSAFLFYTYGAPAPQLWPRFSPSSSPAAIAATLSSFLRSSGLTTALVSSPHHAVTILLDRPDEKNEMGRRYDARQSKVVHENTEGMAPGTGYSQESGMERRMEGGRDSYVMLMLGIHPDQEMAESSYRKQSSERKSALAFLHACLSSLRPSSLARVEGFVRSLERQVLESGEKNWTAVVEEVVEYVVRVCPGNRRETLKREAARQRARHCSLANALFQRFLHATQLTLSDITYRAPPPGNGGRARLSLLMWEASLHQSTPPPLFLLPALTKLLAEGGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSLGERGATSVLAHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEEDANVMSQVSALSLLVRRFSGRTGEDASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGLKGRGENVGRGQKFARDYLGELLARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAFLTANAWKKEERGEKDGKTRTIRVSVREEGVGKVREEAESLVNVTVDGNVILRFRRARARRLPFLEEGGGVLQAFRKSSRLEQDTVQEYRQLRQAQQRQHQQQEVKCGGQNVSDKEVTIRNLFPCPFQGRFLDDRVERVVQAFKAERMDRNKEIRLVGKVISDAGGVGGFGGNGKKRKEGVLDEEEEEVSEEEDILEESEELGHIIEYYFEGVLVPAVLIIQHRKRSTSTTSAVLPSSLARCLMRALTTACPSQTSSRLPWIPLPLGPIDVEYYPIVKSAYDGPGAPNLRDDIKRAVCLPLSSLSTLAGTSIFPAVDKRKGKSHLSETENNVVASRKDSTSHSGAEQASLKFGTMSAQPSTSVPLSSPRVAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLILYEDV 1066
MTSQPVTAPSILSSSPSFDLSAFLFYTYGAPAPQLWPRFSPSSSPAAIAATLSSFLRSSGLTTALVSSPHHAVTILLDRPDEKNEMGRRYDARQSKVVHENTEGMAPGTGYSQESGMERRMEGGRDSYVMLMLGIHPDQEMAESSYRKQSSERKSALAFLHACLSSLRPSSLARVEGFVRSLERQVLESGEKNWTAVVEEVVEYVVRVCPGNRRETLKREAARQRARHCSLANALFQRFLHATQLTLSDITYRAPPPGNGGRARLSLLMWEASLHQSTPPPLFLLPALTKLLAEGGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSLGERGATSVLAHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEEDANVMSQVSALSLLVRRFSGRTGEDASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGLKGRGENVGRGQKFARDYLGELLARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAFLTANAWKKEERGEKDGKTRTIRVSVREEGVGKVREEAESLVNVTVDGNVILRFRRARARRLPFLEEGGGVLQAFRKSSRLEQDTVQEYRQLRQAQQRQHQQQEVKCGGQNVSDKEVTIRNLFPCPFQGRFLDDRVERVVQAFKAERMDRNKEIRLVGKVISDAGGVGGFGGNGKKRKEGVLDEEEEEVSEEEDILEESEELGHIIEYYFEGVLVPAVLIIQHRKRSTSTTSAVLPSSLARCLMRALTTACPSQTSSRLPWIPLPLGPIDVEYYPIVKSAYDGPGAPNLRDDIKRAVCLPLSSLSTLAGTSIFPAVDKRKGKSHLSETENNVVASRKDSTSHSGAEQASLKFGTMSAQPSTSVPLSSPRVAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLILYEDV
Sbjct: 1 MTSQPVTAPSILSSSPSFDLSAFLFYTYGAPAPQLWPRFSPSSSPAAIAATLSSFLRSSGLTTALVSSPHHAVTILLDRPDEKNEMGRRYDARQSKVVHENTEGMAPGTGYSQESGMERRMEGGRDSYVMLMLGIHPDQEMAESSYRKQSSERKSALAFLHACLSSLRPSSLARVEGFVRSLERQVLESGEKNWTAVVEEVVEYVVRVCPGNRRETLKREAARQRARHCSLANALFQRFLHATQLTLSDITYRAPPPGNGGRARLSLLMWEASLHQSTPPPLFLLPALTKLLAEGGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSLGERGATSVLAHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEEDANVMSQVSALSLLVRRFSGRTGEDASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGLKGRGENVGRGQKFARDYLGELLARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAFLTANAWKKEERGEKDGKTRTIRVSVREEGVGKVREEAESLVNVTVDGNVILRFRRARARRLPFLEEGGGVLQAFRKSSRLEQDTVQEYRQLRQAQQRQHQQQEVKCGGQNVSDKEVTIRNLFPCPFQGRFLDDRVERVVQAFKAERMDRNKEIRLVGKVISDAGGVGGFGGNGKKRKEGVLDEEEEEVSEEEDILEESEELGHIIEYYFEGVLVPAVLIIQHRKRSTSTTSAVLPSSLARCLMRALTTACPSQTSSRLPWIPLPLGPIDVEYYPIVKSAYDGPGAPNLRDDIKRAVCLPLSSLSTLAGTSIFPAVDKRKGKSHLSETENNVVASRKDSTSHSGAEQASLKFGTMSAQPSTSVPLSSPRVAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLILYEDV 1066
BLAST of EWM26156.1 vs. NCBI_GenBank
Match: gi|219116254|ref|XP_002178922.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409689|gb|EEC49620.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 231.491 bits (589), Expect = 7.885e-60 Identity = 193/639 (30.20%), Postives = 283/639 (44.29%), Query Frame = 0
Query: 20 LSAFLFYTYGAPAPQLWPRFSPSSSPAAIAATLSSFLRSSGLTTALVSSPHHAVTILLDRPDEKNEMGRRYDARQSKVVHENTEGMAPGTGYSQESGMERRMEGGRDSYVMLMLGIHPDQEMAESSYRKQSSERKSALAFLHAC--LSSLRPSSL--ARVEGFVRSLERQVLESGEKNWTAVVEEV--------------VEYVVRVCPGNRRETLKREAARQRARHCSLANALFQRFLHATQLTLSDITYRAPPPGNGGRARLSLLMWEASLHQSTPPPLFLLPALTKLLAEGGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSLGERGATSVL--AHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEEDANVM-SQVSALSLLVRRFSGRTGE-DASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGLKGRGENVGRGQKFARDYLGELLARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAFLTANA 636
L + L T P P+L + + A L + L +G T+ V SP +++ D K E G ++G + Y + + R ++++M G++P QE E Y +S K + L C L P +L V+ V E + G + ++ E++ ++ V+ P R E L+ E R + +++N Q F L + D+ ++ R+++ ++E + PP LP+L L G E V L DTFW LL GY + ++ + P+L + S + + AHF+PT P YL G AGVGKS+ F PAL VE DP+I V++VKQNLNK L E+ LRPNNNDLSVMSII+GRR + + PGLVVV LEE+ S +DAN +Q++ L+ +RFSGRTG+ + PR S R GIS ++ +FTSNY L S+ LS L +FQ+LV V M + G +FA Y + L RL + LG C + G+ GD R +VR LR LAF T +
Sbjct: 47 LRSLLVATTDRPRPRLPDSLQQTKIKNNLDA-LRTVLDENGFRTSTVMSPRPGLSLYKDSFRLKCEKG--------------SQGPPKNSIYDNQRNLARE-------FLIVMFGLYPHQETLERLY---TSSFKMVFSLLLFCDRLREACPDALQDTEVQKLVDQAETECRLLGTSSLDSISEQIYAASRKVPEKIAGLIQTAVQSDPRLRVEQLQHEHERILCCYSTVSNVHMQLFTQYYDLVIKDVYFKDS--HIEKYQRITIYLYEPDVDLLAPPKFTFLPSLYTALTRGA-----EAVSELMVDTFWTQLLRQGYFCATEIQTLLAPSLNHYFLSGVTRDSTVPIQLNAHFTPTFPLCFYLHGKAGVGKSSLAHAFAPALNATVEQYADPEIVVRFVKQNLNKPMDTLRLELELRPNNNDLSVMSIIRGRRMTMRQSKPGLVVVNLEEM-----------SRDDANADPNQLATAQLISQRFSGRTGDCQGDAGIPRNS------------SRRGISEEATIIPLFTSNYVLGVSSYQALSKLHMFQNLVCVEMIAVSGEDR-----VRFANSYFLQCLQDRLPQ----------FILGNCTLCLDIPLGI---GDTRPLVRHLRMLAFYTCST 612 HSP 2 Score: 77.7962 bits (190), Expect = 7.869e-11 Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = 0
Query: 941 SIFPAVDK---RKGKSHLSETENNVVASRKDSTSHSGAEQASLKFGTMSAQPSTSVPLSSPRVAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLIL 1062
SIF + K + H++ +E ++ S D + L+FG S V + L + AQL IRE++EDTPSM A+ST KSAL K GL+F+V + E ++PE+ SRASLI+
Sbjct: 718 SIFASTKKIVDVRCIEHVNSSEYKMMKSLYDPSDTPNLRDDILQFGPESL------------VCVELHCETVDAQLCIREIIEDTPSMTAFSTEKSALHKSGLLFLVYIHEEITPELRSRASLIV 830
BLAST of EWM26156.1 vs. NCBI_GenBank
Match: gi|224001596|ref|XP_002290470.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973892|gb|EED92222.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 204.527 bits (519), Expect = 1.632e-50 Identity = 192/648 (29.63%), Postives = 291/648 (44.91%), Query Frame = 0
Query: 29 GAPAPQLWPRFSPSSSPAAIAATLSSFLR---SSGLTTALVSSPHHAVTILLDRPDEKNEMGRRYDARQSKVVHENTEGMAPGTGYSQESGMERRMEGGRDSYVMLMLGIHPDQEMAESSYRKQSSERKSALAFLHACLSSLRPSSLAR------VEGFVRSLER---------------QVLESGEKNWTAVVEEVVEYVVRVCPGNRRETLKREAARQRARHCSLANALFQRFL-----HATQLTLSDITYRAPPPGNG--GRARLSLLMWEASLHQ----STPPPLFLLPALTKLLAE----GGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSL--GERGATSVL--AHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEEDANVMSQVSALSLLVRRFSGRTGE--DASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGLKGRGENVGRGQKFARDYLGELLARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAF 631
G P+ + +++ +A +SSF + + G T V+SP AV++ LD + V E +G T ++ E G R+ Y++ +LG+ PDQ M E+ Y QS + +L L S+R + + V G+ LE+ Q L + + +V ++V + + R + L E R +C+L+NA QR+L + L ++ +++ PP R+++ + + ++ S LP+L+KLL + G + +V T W+ LL +GY+ + KE + L F S L G G+ +L HF PT SLYL G AG GKS+ V PA+ A+ DP++ V++VKQNLNK + L+ EM LR NNNDLSVMSIIQGRR + A + PGLV V LEE+P + EG D N Q LL RFSGR G+ + PR S + GIS ++ + TSNY L + L L +F++L V + + G+ ++FA YL + + + LA P G E V G GD R +VR LR L+F
Sbjct: 103 GTPSSNSYNATLRNTTTSAAEDNVSSFRQLWINHGFRTTAVTSPRAAVSVYLDSCRAR-----------CAVADEQGDGT---TVFTNEQG---RL------YLLTILGLSPDQSMLENEY--QSIQSVYSLCLFIKKLKSVREQDMKKECVVEIVSGWQELLEKIVDYSQQTTPASTLKQQLANLSNATSNIVSQLVSKLTDIDHSLRTDQLMHEYNRITYENCTLSNACLQRWLGRKSNNPNSWQLEEVFFKSSPPNRYLPKYERITMHLIDKHSNERRATSNNSNFVFLPSLSKLLQTETHVANQTTGVKTIVDNMICTTWECLLRDGYYVDERRKELLGLELRKFYESGLMAGRDGSMPLLLNGHFQPTYSLSLYLHGTAGAGKSSLVRNIVPAINAAIAKHCDPELLVRFVKQNLNKPFKTLQLEMDLRANNNDLSVMSIIQGRRMTLAQSKPGLVFVALEEMPSNV-EGA------DPN---QGEVSKLLSMRFSGRKGDFKEGGGNIPRNS------------AKRGISGDATIITVLTSNYHLEKPSLEALQRLEMFKNLKVVEVAPVSGKYR-----EEFALSYLSQRVGQSLA-PWN----------GSLEIDLNVPC---GSGDTRPLVRYLRMLSF 684 HSP 2 Score: 69.3218 bits (168), Expect = 3.778e-8 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 0
Query: 1000 VAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLIL 1062
VA+ L S AQL IRE++ED+PS+ A+ST +SAL K+GL+F V V ++PEI SRASL++
Sbjct: 857 VAVELTCHSTDAQLCIREIIEDSPSLTAFSTERSALYKDGLLFGVCVDGEITPEIESRASLVI 919
BLAST of EWM26156.1 vs. NCBI_GenBank
Match: gi|922861965|gb|KOO29650.1| (hypothetical protein Ctob_008264 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 156.762 bits (395), Expect = 1.059e-35 Identity = 161/554 (29.06%), Postives = 244/554 (44.04%), Query Frame = 0
Query: 131 LMLGI---HPDQEMAESSYRKQSSERKSALAFLHACLSSLRPSS-LARVEGFVRSLERQVLE-----SGEKNWTAVVEEVVEYVVR--VCP-----GNRRETLKREAARQRARHCSLANALFQRFLHATQLTLSDITYRAPPPGNGGRARLSLLMWEASLH--QSTPPPLFLLPALTKLLAEGGREGGREKVVSLFTDTFWQALLLNGYHPESNLKERVTPALFAFAASSLGER-GATSVLAHFSPTRPFSLYLTGDAGVGKSAFVARFPPALATAVEACFDPQIQVQYVKQNLNKTCRDLEREMTLRPNNNDLSVMSIIQGRRQSFAHAHPGLVVVGLEEVPPPIAEGTAGASEEDANVMSQVSALSLLVRRFSGRTGEDASSAQPRASPHLSRQAQRQYQGRDGISTHTEVLCIFTSNYPLLPSARILLSPLPLFQHLVHVPMEGLKGRGENVGRGQKFARDYLGELL--ARRLARPRETVEVEEVQGLGGCETGARVEAGLEGEGDIRGMVRQLRTLAFLTANAWKKEERGEKDGKTRTIRVSVREEGVGK 663
LM G+ H D E S R+Q R+ A F +LRP++ LA + + Q +E + + A E ++ +VR +C G L R + A H SL+NA RF T + + D T P + R RLS+L+++ S+H Q P +PAL +L+ RE E + T W+ L Y+P ++ + P L + S L +R GA + A P P LYL G AG GKS+ V PAL+ V A P++ +VKQNLNK L+ E+ RPNNNDLSV+ +++ R+ + P L+++ LEE+P E T + E A + +AL L S G+D + + L+ + R + H +++ FTSNY L +A L LF L V ++ + G + G R + E L A A R + LG R++ G+ GD+R +VR LR +A + G+ + R + R V K
Sbjct: 4 LMCGLDDGHDDLERKFQSIRRQLLARRLASRF-----RTLRPTAELAEALAPLDAAASQAIEHARVVDNDDDDGAQAEAQMDALVRRAICAACQPMGATELQLTRVWQQLLATHSSLSNACLARFCEETGVQVQDATLVTSP--HPSRVRLSVLLYDKSVHDAQQRPRSFAWIPALRRLM----REPDVELLSQAMTARLWRELRWQQYYPSDEIRASLEPCLHRWFRSCLIDRNGALRLRACLRPQTPICLYLHGAAGSGKSSIVRALLPALSATVRAFLHPELLGAFVKQNLNKPVAHLDLELQRRPNNNDLSVVHVVEMAREPLSATEPRLLLLALEEMPDTAPEQTPEQTPERARGRTPSTALELA---GSSPGGDDGAVSGGAGGTQLAVAKLLAERFRKS-AAHPDLIVCFTSNYTLCDAAAAALKACTLFASLECVTIQPVGG-AQRAALGGAMLRTLIAEGLASAEHGAPDRAPPSAASNECLG---IDMRLDLGV---GDVRPLVRLLRAVAAYAITMLNAQLAGQAPYRARELDDGSRASKVAK 535 HSP 2 Score: 66.2402 bits (160), Expect = 2.706e-7 Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 998 PRVAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVG----EALSPEIGSRASLIL 1062
PRVA+ L A + ++L IRE++ED+PS+VA+S K L K GL+F+V G +A+SPE+ SRASL+L
Sbjct: 649 PRVAVELLAPTSASELMIREMVEDSPSVVAHSVHKRILHKRGLLFVVLTGAPSEKAISPELRSRASLVL 717
BLAST of EWM26156.1 vs. NCBI_GenBank
Match: gi|1072223680|gb|OEU08434.1| (hypothetical protein FRACYDRAFT_271686 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 63.5438 bits (153), Expect = 4.859e-8 Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0
Query: 1000 VAIHLQARSFQAQLKIRELLEDTPSMVAYSTAKSALRKEGLIFIVEVGEALSPEIGSRASLIL 1062
VA+ L + +QL RE++ED+PSM A+ST KSAL K GL+F + V +PEI SR S +L
Sbjct: 90 VAVELDCPTEDSQLCSREMIEDSPSMTAFSTTKSALHKSGLLFAIHVEGEATPEIMSRVSFVL 152 The following BLAST results are available for this feature:
BLAST of EWM26156.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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