EWM26139.1, cds4581 (CDS) Nannochloropsis gaditana

Overview
NameEWM26139.1
Unique Namecds4581
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:991089..991252 -
Alignment locationCM002463.1:989758..990904 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26139.1
Productprotoheme ix farnesyltransferase
Orig transcript idgnl|cribi|Naga_100014g71.9316.mrna
GeneCOX10
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:991089..991252 -
CM002463.1supercontigCM002463.1:989758..990904 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0048034heme O biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004659prenyltransferase activity
GO:0008495protoheme IX farnesyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase
IPR006369Protohaem_IX_farnesylTrfase
Homology
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|585108133|gb|EWM26139.1| (protoheme ix farnesyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 879.396 bits (2271), Expect = 0.000e+0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0
Query:    1 MGCLLPLSSSYSSSKAVALVAGHQGRGPVVPRIAKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEVVEKVKGEAEASAMRMPLSLRMGDGGVRRE 436
            MGCLLPLSSSYSSSKAVALVAGHQGRGPVVPRIAKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEVVEKVKGEAEASAMRMPLSLRMGDGGVRRE
Sbjct:    1 MGCLLPLSSSYSSSKAVALVAGHQGRGPVVPRIAKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEVVEKVKGEAEASAMRMPLSLRMGDGGVRRE 436          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|299117072|emb|CBN73843.1| (COX10 homolog, cytochrome c oxidase assembly protein [Ectocarpus siliculosus])

HSP 1 Score: 360.533 bits (924), Expect = 2.284e-118
Identity = 185/339 (54.57%), Postives = 234/339 (69.03%), Query Frame = 0
Query:   36 VSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQE 374
            V+    +  L ++L K RLSALV+ TTS+G+LAAGGPV  L  T+  VGTMLA+ SANTFNQ++ET ND RM RT  RPLPSGR SR  AL W V S  A   VL AG+NPLT  LG  NL LY  PYTLSKTRSE NTW+G++VGAVPPLMGWAAA      T  L + + +LLA+ LF+WQFPHFF+L+W+HR+DYARGGF MVPCAD  G RTA L+ RYS  L P+P+ A  L  T  MFA+EG+A N YL+Y A RF  ++++  AR VF+ SLW+LP +L  FVFHSR+W+ E   E      E+    ++R     R +L K+C+HE++ ++
Sbjct:   49 VAEAGHLMKLYSQLSKHRLSALVMSTTSAGYLAAGGPVDALALTSACVGTMLASSSANTFNQVIETANDARMHRTRARPLPSGRISRQHALGWGVASGTAGITVLAAGSNPLTATLGAANLLLYVGPYTLSKTRSEINTWVGSVVGAVPPLMGWAAA------TGELVAVEPLLLATYLFMWQFPHFFSLAWLHREDYARGGFAMVPCADPTGSRTASLVTRYSWYLVPIPLAAAALDATSWMFAVEGTAFNAYLLYHAYRFDGDKSNANARGVFKASLWHLPAVLALFVFHSRRWELEDKAE-----DEQLGTLIQR----IRARLTKLCLHEIVQKD 372          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|325187085|emb|CCA21627.1| (protoheme IX farnesyltransferase putative [Albugo laibachii Nc14])

HSP 1 Score: 331.643 bits (849), Expect = 1.243e-106
Identity = 183/407 (44.96%), Postives = 249/407 (61.18%), Query Frame = 0
Query:   23 HQGRGPVVPRIA---------KVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQW-------------DSERVTETVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEV 407
            HQ   PV+  +          K  +  QI G+  +LGK RLS LVV+++S+GFL AGGPV+W+ F ++SVGT LAA SANTFNQ++E+D D +MKRT  RPLP    +   A+A+   +A  S  +L  G N  T ALG+ N+ LY L YT SK R+E NTWIG++VGAVPP+MGWAAAT        + S ++VL A++LF WQ PHFFALSW  RKDYARGG++MVPCAD  G RT+ L  RYS  L P+P+ A     T  MFA+EG+ +N+Y ++LAR+F+   T+  A  VF CSLWYLPV+L   V HS+ W             +SE +T  +  S  ++ L++   +   R+ L  +C+HE    E   E+   R+     LLCP    G+V + T++V
Sbjct:   27 HQSSLPVLDHVKTQVAEASDWKTRTKHQI-GVYNQLGKVRLSTLVVMSSSAGFLMAGGPVSWVSFASLSVGTGLAAISANTFNQVIESDLDAKMKRTCKRPLPLQLITHRHAIAFGSSTAALSTILLGLGCNVPTAALGLFNIGLYTLVYTPSKVRTEWNTWIGSIVGAVPPVMGWAAATGS------IFSVESVLQAALLFCWQMPHFFALSWKSRKDYARGGYKMVPCADPTGARTSALALRYSFYLLPIPIAAYLFDTTSCMFAIEGTLINVYAIHLARKFRRHPTNATAHQVFMCSLWYLPVILTCMVLHSQNWWSDREPMEIKLHPNSEEITLKI-ESESQSPLTLSNRIRALRRYLKGICIHEKFWGE---EENAIRKADSSRLLCP----GYVHKSTQQV 418          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|673038782|ref|XP_008873352.1| (protoheme IX farnesyltransferase [Aphanomyces invadans] >gi|574470782|gb|ETV97791.1| protoheme IX farnesyltransferase [Aphanomyces invadans])

HSP 1 Score: 325.865 bits (834), Expect = 2.587e-104
Identity = 178/375 (47.47%), Postives = 229/375 (61.07%), Query Frame = 0
Query:   38 SIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSER----------VTETVGNSGERNN---LSVERW---VSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVV 396
            S+++   + ++L KARLSALVVLT  SGF   GGP++W  F A+SVGT LAA SANTFNQ  E   D  MKRT  RPLP G  +R  A+A+   +A  S A+L A  NPLT +L + N+ LY+L YT  K  SE NTW+GALVGA+PP+MG  AA        +L SP+A+L  + LF+WQ PHFFALSW  R DYARGG++M+PCAD  G RT+ +I RY+L L  LPV A   G T  MFALEG A+N Y + LAR+F +  +   A+ VF CSLWYLP +LG  VFHS+ WD E           + + V  S E N    ++V+ W   V+  +  L +VCVHE +    K       +  +  L CP VV
Sbjct:   52 SLKERLTIYSQLSKARLSALVVLTAGSGFFMMGGPISWSAFAALSVGTTLAAASANTFNQAWEIKTDSMMKRTMTRPLPRGAITRNHAVAFGAATAVTSTALLAAACNPLTASLSLFNIGLYSLVYTPMKQTSEWNTWVGALVGAIPPVMGVTAA------NGMLLSPEAMLTGAALFMWQMPHFFALSWRLRHDYARGGYKMIPCADPTGVRTSGVIMRYALGLTALPVAAAASGATSYMFALEGLAINAYAVNLARKFYAAPSTANAQKVFLCSLWYLPAVLGLMVFHSKNWDEETAEAKQLQHEPLLQLVEGSSETNQTATVAVDAWTRRVNEVKSYLKEVCVHEYLW---KPTNSTAVKSDDSHLFCPIVV 417          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|1173957097|gb|OQS03710.1| (protoheme IX farnesyltransferase [Thraustotheca clavata])

HSP 1 Score: 323.168 bits (827), Expect = 1.707e-103
Identity = 169/381 (44.36%), Postives = 230/381 (60.37%), Query Frame = 0
Query:   45 LCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNL------------------SVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEV 407
            + ++L KARLS+LVV+T  +GF   GGP++W  F+A++VGT LAA SANTFNQ  E   D  MKRT  RPL +G  ++  ALA+   +A +S A+L AG NPLT +L + N+ LY+  YT  K  SE NTW+GALVGA+PP+MG AAA        LL SP+A+L  S LF+WQ PHFFALSW  R DYARGG++M+PCAD  G+RTA +I RY+L L+ LPV A   G T  MFA+EG  +N Y ++LAR+F +  +   A  VF CSLWYLP +LG  VFHS  W ++ V E  G      ++                   ++ +V   R QL +VC+HE + +    ++    +  +  L CP V     V+  + +
Sbjct:   42 IYSQLSKARLSSLVVVTAGAGFFMMGGPISWGSFSALAVGTTLAAASANTFNQAYEIRTDGLMKRTMTRPLVTGAVTKNHALAFGAATALSSTALLAAGCNPLTASLSLFNIGLYSCIYTPMKQTSEWNTWVGALVGAIPPVMGVAAAN------GLLLSPEALLTGSALFMWQMPHFFALSWRLRHDYARGGYKMIPCADPTGKRTAGVIMRYALALSALPVAAAATGATSYMFAVEGLGINAYAVHLARKFYTNPSTANANKVFFCSLWYLPAVLGLMVFHSNNWKNDEVVEKEGQHQSLLDVLAPSSEDTIEFKTAPVADRLKEFVLSTRAQLKEVCLHEYLWKSA--DKNAPLKEDDSHLFCPVVTTASAVDTAQSI 414          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|953492189|emb|CEG45439.1| (protoheme ix farnesyltransferase [Plasmopara halstedii])

HSP 1 Score: 325.094 bits (832), Expect = 3.916e-103
Identity = 176/417 (42.21%), Postives = 247/417 (59.23%), Query Frame = 0
Query:   30 VPRIAKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQW-DSERV----------------TETVGN--------SGERNNLSVERW----VSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEVVEKVKGEAEA 417
            +  + KV +++    + ++L KARLSALVV+TT +GFL AGGP++W  F A ++GT LAA SANTFNQ  E D D +M+RTH RPLPSGR S+P ALA+   +A AS  +L  G +PL  +LG+ N+ LY+L YT  K +SE NTW+G++VGA+PP+MGWAAAT        L +P+AVL A +++ WQ PHFFALSW  RKDY RGG++MV C D  G R+A L  RYS  +  +P++A+    T  MFA+EGS +N Y +YLA +F +   +  A+ VF  SLWYLPV++G  V HS+ W D + +                 E  GN        + ++N +S   W    V   R+ + + C+HE +       + G     +  +LC PV  G+  +ET  V    K +  A
Sbjct:   58 IIHLGKVITLKDRLMIYSQLSKARLSALVVMTTGAGFLMAGGPISWSTFAAATLGTSLAAASANTFNQCWEVDLDAKMQRTHRRPLPSGRISQPHALAFGAATATASTVILATGCSPLVASLGLFNIGLYSLVYTPMKMKSELNTWVGSIVGAIPPVMGWAAATGT------LLAPEAVLHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIIASITDTTSYMFAVEGSIVNAYAIYLAHKFYANPNNATAQKVFMASLWYLPVVMGCMVLHSQNWMDKDEIEQNKDVRVWREAFLGEVENFGNFQSNQVSENFDKNTMSA--WFVSKVRAVRRCMREFCIHENLWG----VKNGQHHADKTNVLC-PVHVGNQAKETMAVTTPTKKDLTA 461          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|635363992|emb|CCI47521.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 322.013 bits (824), Expect = 6.663e-103
Identity = 187/431 (43.39%), Postives = 254/431 (58.93%), Query Frame = 0
Query:    7 LSSSYSSSKAVALVAGHQGRGPVVPRIAKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQW--DSERVTE-----------------TVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEVVEKVKGEAEAS 418
            L ++Y+  ++   V  H     V P   K  + + + G+  +LGK RLSALVV+++ +GFL AGGPV+W+ F ++S+GT LAA SANTFNQ++E+D D +MKRT  RPLP    S   A+A+   +A  S  +L  G N  T  LG+ N+ LY L YT SK R+E NTWIG++VGAVPP+MGWAAAT      S+LS  +A L A++LF WQ PHFFALSW  RKDYARGG++M+PCAD  G RT+ +  RYSL L P+PV A  L  T  MFA+EG+ +N Y ++LAR+F    T+  A  VF CSLWYLPV+L   V HS+ W  D ER+                   + GN     N+  +R +   R  L  +C+HE +  E +         R   +LCP    G+V + T+E+    +   E S
Sbjct:   20 LYTNYARYQSGLPVLDHVKTQVVEPSDWKTRT-KHLIGVYNQLGKVRLSALVVMSSGAGFLMAGGPVSWVSFASLSLGTGLAAISANTFNQVMESDLDAKMKRTCKRPLPLRAISHRHAIAFGSSTAAISTILLGLGCNLPTATLGLFNIGLYTLVYTPSKVRTEWNTWIGSIVGAVPPVMGWAAATG-----SVLSV-EAALQAALLFCWQMPHFFALSWKSRKDYARGGYKMIPCADPTGARTSAIALRYSLYLLPIPVAAYLLDATSCMFAVEGTLINAYAIHLARKFAQNPTNATAHKVFMCSLWYLPVILMCMVLHSQNWLSDKERIETKSKSAFSSESDNRSDKLSAGNIKTEGNVISDR-IRSLRLYLKGICIHEKLWGEKENAVSKADASR---MLCP----GYVSKSTQEMTALCRKVDEKS 435          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|1173930151|gb|OQR83121.1| (protoheme IX farnesyltransferase [Achlya hypogyna])

HSP 1 Score: 319.316 bits (817), Expect = 8.537e-102
Identity = 177/385 (45.97%), Postives = 230/385 (59.74%), Query Frame = 0
Query:   38 SIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQW--DSERVTETVGNSGERN-----------NLSVER--------------WVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPV 395
            ++ +  G+ ++L KARLS+LVV+T  +GF   GGP++W  F A++VGT LA+ SANTFNQ  E   D  MKRT +RPL  G  SR  ALA+   +A +S A+L AG NPLT  L + N+ LY+  YT  K  SE NTWIGALVGA+PP+MG AAA        L+ SP+A+L  S LF+WQ PHFFALSW  R DYARGG++M+PCAD  G RTA +I RY+L L  LPV A   G T  MFA+EG A+N Y + LAR+F +  T   A  VF CSLWYLP +LG  VFHS+ W  D E+V +     GER            + ++E               +V   R QL +VC+HE + +    E+    +  +  L CP V
Sbjct:   51 TLSERVGVYSQLSKARLSSLVVVTAGAGFFMMGGPISWSSFAALAVGTTLASASANTFNQAYEIRTDGLMKRTMMRPLVQGVVSRNHALAFGAATAVSSTAILAAGCNPLTAGLSLFNIGLYSCIYTPMKQTSEWNTWIGALVGAIPPVMGVAAAN------GLMLSPEALLTGSALFMWQMPHFFALSWRLRHDYARGGYKMIPCADPTGARTAGVIMRYALGLTALPVAAAATGATSYMFAVEGLAINAYALNLARKFYANPTTANANKVFFCSLWYLPAVLGLMVFHSKNWTKDDEKVVQ-----GERQADGSIYAILETDAAIEEESFKSLPVADRLKDFVLSTRAQLKEVCLHEYLWKSA--EKNTPLKTDDSHLFCPVV 422          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|669150148|ref|XP_008610636.1| (hypothetical protein SDRG_06624 [Saprolegnia diclina VS20] >gi|530737632|gb|EQC35874.1| hypothetical protein SDRG_06624 [Saprolegnia diclina VS20])

HSP 1 Score: 315.464 bits (807), Expect = 1.257e-99
Identity = 174/385 (45.19%), Postives = 227/385 (58.96%), Query Frame = 0
Query:   44 GLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQW--DSERVTET----------------VGNSGERNN-----LSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETK 405
            G+  +L KARLSALVV+T  +GF   GGPV+W  F A++VGT LA+ SANTFNQ  E   D  MKRT LRPL  G  ++  ALA+   +A +S A+L AG NP+T  L + N+ LY+  YT  K  SE NTW+GALVGA+PP+MG AAA        L+ SP+A+L  S LF+WQ PHFFALSW  R DYARGG++M+PCAD  G RTA +I RY+L L+ +PV A   G T  MFA+EG  +N Y ++LAR+F    +   A  VF CSLWYLP +LG  VFHS+ W  D E V ET                  + GE          ++  V   R QL +VC+HE +      ++    ++ +  L CP V     V+ T+
Sbjct:  105 GIYNQLAKARLSALVVVTAGAGFFMMGGPVSWGSFAALAVGTSLASASANTFNQAYEIRTDGLMKRTMLRPLVRGTITKNHALAFGAATAVSSTAILAAGCNPVTAGLSLFNIGLYSCIYTPMKQTSEWNTWVGALVGAIPPVMGVAAAN------GLVLSPEALLTGSALFMWQMPHFFALSWRLRHDYARGGYKMIPCADPTGARTASVIMRYALALSTIPVAAAATGATSYMFAVEGLGINAYAVHLARQFYKNPSTANANKVFFCSLWYLPAVLGLMVFHSKNWTKDDEIVAETERQADGSIYALLESSAATHEGETFRPLPVADKLKELVLSTRAQLKEVCLHEYLW--ASADKDAALKQDDTHLFCPVVATDAAVDTTQ 481          
BLAST of EWM26139.1 vs. NCBI_GenBank
Match: gi|813142402|ref|XP_012199279.1| (hypothetical protein SPRG_05289 [Saprolegnia parasitica CBS 223.65] >gi|641536202|gb|KDO30098.1| hypothetical protein SPRG_05289 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 308.145 bits (788), Expect = 1.588e-97
Identity = 170/385 (44.16%), Postives = 229/385 (59.48%), Query Frame = 0
Query:   34 AKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNLSVERWVSGA---------RKQLAKVCVHEMML----QEGKVEQGGGRERREGGLLCPPVVAGHVVEETK 405
            A   ++ +  G+  +L KARLSALVV+T  +GF   GGPV+W  F A++VGT LA+ SANTFNQ  E   D  MKRT +RPL  G  ++  ALA+   +A +S A+L AG NPLT  L + N+ LY+  YT  K  SE NTW+GALVGA+PP+MG AAA        LL SP+A+L  S LF+WQ PHFFALSW  R DYARGG++M+PCAD  G RTA +I RY+L L+ LPV A   G T  MFA+EG  +N Y ++LAR+F    +   A  VF CSLWYLP +LG  VFHS+ W  +   E   ++  + + S+   + G+         R       + E++L    Q  +  +  G ++ +  L CP V     V+ T+
Sbjct:   49 ATTLTLSERVGIYNQLAKARLSALVVVTAGAGFFMMGGPVSWGSFAALAVGTTLASASANTFNQAYEIRTDGLMKRTMMRPLVRGTITKNHALAFGAATAVSSTAILAAGCNPLTAGLSLFNIGLYSCIYTPMKQTSEWNTWVGALVGAIPPVMGVAAAN------GLLLSPEALLTGSALFMWQMPHFFALSWRLRHDYARGGYKMIPCADPTGSRTAGVIMRYALALSTLPVAAAATGATSYMFAVEGLGINAYAVHLARQFYKNPSTANANKVFFCSLWYLPAVLGLMVFHSKNWTKDD--EATADTERQADGSIYALLDGSSATAEGESFRPLPVADKLKELVLSTRAQLKERREDAGLKQDDTHLFCPVVATDAAVDTTQ 425          
The following BLAST results are available for this feature:
BLAST of EWM26139.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108133|gb|EWM26139.1|0.000e+0100.00protoheme ix farnesyltransferase [Nannochloropsis ... [more]
gi|299117072|emb|CBN73843.1|2.284e-11854.57COX10 homolog, cytochrome c oxidase assembly prote... [more]
gi|325187085|emb|CCA21627.1|1.243e-10644.96protoheme IX farnesyltransferase putative [Albugo ... [more]
gi|673038782|ref|XP_008873352.1|2.587e-10447.47protoheme IX farnesyltransferase [Aphanomyces inva... [more]
gi|1173957097|gb|OQS03710.1|1.707e-10344.36protoheme IX farnesyltransferase [Thraustotheca cl... [more]
gi|953492189|emb|CEG45439.1|3.916e-10342.21protoheme ix farnesyltransferase [Plasmopara halst... [more]
gi|635363992|emb|CCI47521.1|6.663e-10343.39unnamed protein product [Albugo candida][more]
gi|1173930151|gb|OQR83121.1|8.537e-10245.97protoheme IX farnesyltransferase [Achlya hypogyna][more]
gi|669150148|ref|XP_008610636.1|1.257e-9945.19hypothetical protein SDRG_06624 [Saprolegnia dicli... [more]
gi|813142402|ref|XP_012199279.1|1.588e-9744.16hypothetical protein SPRG_05289 [Saprolegnia paras... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4593rna4593Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications