EWM26144.1, cds4576 (CDS) Nannochloropsis gaditana

Overview
NameEWM26144.1
Unique Namecds4576
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:977595..978448 -
Alignment locationCM002463.1:974897..977474 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26144.1
Productrpot-like rna polymerase
Orig transcript idgnl|cribi|Naga_100014g66.9321.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:977595..978448 -
CM002463.1supercontigCM002463.1:974897..977474 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: INTERPRO
TermDefinition
IPR002092DNA-dir_Rpol_phage-type
IPR024075DNA-dir_RNA_pol_helix_hairpin
IPR029262RPOL_N
Homology
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|585108138|gb|EWM26144.1| (rpot-like rna polymerase [Nannochloropsis gaditana])

HSP 1 Score: 2358.56 bits (6111), Expect = 0.000e+0
Identity = 1143/1143 (100.00%), Postives = 1143/1143 (100.00%), Query Frame = 0
Query:    1 MLRAGCAKSYGKGRYHLVGQGLPIISKSRPHGVPLRAMAAARRLWDRTTVSNSVASILPTSSPSFEARSIQAQASVFTSDSAIISDCGNALESSSTETRRANSTDSFKELYHVLKQQQEMDILQRRLRQGDQPMLPPTIESLRDQAAALMRPGWAEEGGARVRGVSGRDTEAGGRSNSNMLIGEANETAFFLDEIEEDMYPPLGPESVQGGGSHEGLQQIKEHLAPHARPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1143
            MLRAGCAKSYGKGRYHLVGQGLPIISKSRPHGVPLRAMAAARRLWDRTTVSNSVASILPTSSPSFEARSIQAQASVFTSDSAIISDCGNALESSSTETRRANSTDSFKELYHVLKQQQEMDILQRRLRQGDQPMLPPTIESLRDQAAALMRPGWAEEGGARVRGVSGRDTEAGGRSNSNMLIGEANETAFFLDEIEEDMYPPLGPESVQGGGSHEGLQQIKEHLAPHARPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD
Sbjct:    1 MLRAGCAKSYGKGRYHLVGQGLPIISKSRPHGVPLRAMAAARRLWDRTTVSNSVASILPTSSPSFEARSIQAQASVFTSDSAIISDCGNALESSSTETRRANSTDSFKELYHVLKQQQEMDILQRRLRQGDQPMLPPTIESLRDQAAALMRPGWAEEGGARVRGVSGRDTEAGGRSNSNMLIGEANETAFFLDEIEEDMYPPLGPESVQGGGSHEGLQQIKEHLAPHARPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1143          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|298708570|emb|CBJ30655.1| (mitochondrial DNA-directed RNA polymerase [Ectocarpus siliculosus])

HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0
Identity = 413/987 (41.84%), Postives = 569/987 (57.65%), Query Frame = 0
Query:  194 EIEEDMYPPLG--PESVQGGGSHEGLQQIKEHLAPHARPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGN-------------GVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSE--TYGDRVLNILRENGMISLKRVNRKAREAL---EDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKK-----RGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQ-------IARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMEN----VQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEK-FQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1143
            E E+D   PL   P++V  G   E   +++    P++           L  +++  E+ +  EA  +Y ++   L   GK   +  ++R +  WY  + E++     + +E  W+++ +             G GTYG FL+++  DK AV+ ++E VNLIL  GN+GV        +A+ V+ EVN +R+ +    G RV    + + +  ++ VN++A++AL   ED  W    ++K+G  L+  L     I   C                                   D+  G                R+ E  P    A    H I K     +G + +   ++  M    D+    TPR+ PM+V P  W   + GG+L+L++ I+R++   AQ  ALR A + +VY ALN LG+V W ING VL T+       + VGDLP   D  +PP       P       LG     V G   E+  + ++R Q       +  + K++NA + SLRCD +IK+ IA+EFR+H  YFPYN+DFRGR YP+PPNLN LGSD  RG+L F E +PLG+ GL WLK+HLANL G+DK+SFDDRVAFVE+ M+     V+DSA RPL G+ WW+ A+ PWQ LAVC ++ AA++S DP  +LS +PVH DGSCNGLQHYAALG D  G  QVNL  S  P+DVY+GVCD V K V  EA+      A+  +      A++VDGLI+RKVVKQTVMTSVYGVT+VGAR QIQ  L +K     ++  + + E E+ VY+AS YVA  T++ L ELF+ ARN M+WL   + LVA++ QPMSW+TPLGLPV+QPYRR     V+TL+Q V + + +DKLPV+  RQ +AFPPNFVHSLDSTHM+MTA  +  +GVPF AVHDSYW HA NV+VMN  LR+CF+ LY  P+LE L DSL  R+P + FPPIP+RG L L+ VKDS YFF+
Sbjct:  249 EEEDDFVDPLMEIPQAVDRGDKGEDKDEVE---LPYS----------TLYQMQLDREDQSHQEACEKYGKMVKELMTMGKGTQMKPIERLLTTWYPALKESIE----REQEAVWANVTDDNKGTVKTSGSFGGRGTYGAFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKDGKKGQRV----QVSSLRHVREVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLL-----IETACWT--------------------------------YDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAF--VHDIIKGKNSRKGSLTMAPEIFSKMVDE-DISRLATPRFVPMLVPPLDWIKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKALNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIKDLPLPP------RPDGVTVDRLGRLRAPVQGEH-EDEEVFKERRQKHYAYKRLLEKTKQKNANMHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDESWREVRDSALRPLEGECWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVALEASTVPPEGASVVDLANHEIAKMVDGLIDRKVVKQTVMTSVYGVTFVGARAQIQNVLGDKMIGHTDESGVPSAEVEENVYKASAYVAKHTMTVLEELFTEARNTMDWLKAVSQLVAKEDQPMSWITPLGLPVLQPYRRTDTYQVQTLLQGVHIREDSDKLPVAVKRQTTAFPPNFVHSLDSTHMMMTAIEMDKVGVPFAAVHDSYWVHAGNVDVMNDKLRQCFVDLYSGPILEDLHDSLRMRYPTIDFPPIPERGTLVLDSVKDSKYFFN 1167          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|676380291|ref|XP_009033424.1| (hypothetical protein AURANDRAFT_20280 [Aureococcus anophagefferens] >gi|323456523|gb|EGB12390.1| hypothetical protein AURANDRAFT_20280 [Aureococcus anophagefferens])

HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0
Identity = 393/894 (43.96%), Postives = 530/894 (59.28%), Query Frame = 0
Query:  255 ALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALEST---HSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPE--VYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHT-FYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFF 1142
            A A+Y+ + + L   GK A L  V+R +  WY P++  +TA      +G   D G  +  YGP L+L+PP++LAV+T++ T+ L L+HG  G   + L+  + + V+ E   L+L                  +L+R   KA E  E                        +  P+  LD A+    L    V    +++LE+      P + +A  G+        AL  A  +V +  A S  LE T    + +K G++   + +         ++    PR+ PM+V+PR W+++D GG+L+L++  +R+     Q +A R AR  E  V   L+ +G+VPW +NG V   ++ A+A G    DLPSQ D  +P        P     AL  A+ D   G++  +  L R     + R+K+RNAEL SLRCDT +KL IAE+F++   FYFPYN+DFRGRAYPVPPNLNHLGSD+CR ML FAE + LG +GL WL+IHLANL G  K S DDR AF      +++D+  RP++G  WW +A+EPWQALA C+E+  A E  DP  +   +PVH DGSCNGLQHYAALGRD EG +QVNL+    PRDVY GV   V + V   AT        +E     R A++VDGLI RKVVKQTVMTSVYGVT+VGAR+QI  RL +              +E E+Y  + YVA +TL  L ELF++AR+IM WL+ CA LV+  GQP+SW+TPLGLPV+QPYRRD    VKTL Q+V+LVD +DKLPVS +RQ+SAFPPNFVHSLDS+HMLMTA  +   G+ FTAVHDSYW HA++V  MN+TLR CF+ LYE P+LE L +S   R+PD  FPP+P RG L + +V D+ YFF
Sbjct:   88 ACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKATLDG---DKGGDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKLR-----------------NLRRERLKAAEDAEG----------------------KRAVPKTFLD-ARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGS--------ALVMALLDVAKDDAGSPLLEHTIVYSNARKIGIIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEGGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALP-------EPMDLAEALARADGDEDGGKKLYDAHLRR-----SARLKRRNAELHSLRCDTLLKLSIAEQFKDEAAFYFPYNVDFRGRAYPVPPNLNHLGSDVCRAMLTFAEAKRLGDDGLFWLRIHLANLFGLSKKSLDDRAAFAVAHEADIRDAYERPMDGNMWWLEADEPWQALAACRELARAAELDDPRDYECALPVHADGSCNGLQHYAALGRDHEGGRQVNLLPGEAPRDVYEGVRALVAEKVARAAT-------GDEALETVRLAQIVDGLITRKVVKQTVMTSVYGVTFVGARQQILGRLTDA----------GDVDEAELYLCACYVARLTLEVLEELFTSARHIMGWLAQCARLVSLHGQPVSWITPLGLPVVQPYRRDGQHAVKTLAQTVLLVDNSDKLPVSVTRQKSAFPPNFVHSLDSSHMLMTAVEMDHRGLAFTAVHDSYWTHAADVATMNSTLRHCFLELYEAPLLEKLLESFELRYPDTDFPPLPPRGDLDIAKVLDADYFF 901          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|223995603|ref|XP_002287475.1| (rpot-like RNA polymerase [Thalassiosira pseudonana CCMP1335] >gi|220976591|gb|EED94918.1| rpot-like RNA polymerase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 378/993 (38.07%), Postives = 560/993 (56.39%), Query Frame = 0
Query:  236 KREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAM-------------TALHAKL-----REGKWSDLGNGV---------GTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNF---LRLSETYGDRVLNILRE-----NGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDA------LT---------------------------SANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQH---YLTPRY------RPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRN-HTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEA--------TRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFF 1142
            K ++LR L++  E  +  EA+ +     ++         +P +++ + +WYG + EA+             T+  ++L      +G  S   NG+           YGP L L+PP K A++  +  ++  +  G  G  +  L ++IA A+ TEVN    LR+  +     +N L +     +G++ +        ++L D        I V   + +  H + +   E  L G     G + P  G GR +    R R Q   L +   G EG  D T A      LT                           S  R     PA   + + T  +K  G V +   + + +A   ++ H   +++PRY      +PMVV P+ WK+ D GGY  +K+  +R+++ K Q DA+R A + +V+  LN LGR+PW IN  VL    + +  G+ +GD+PSQ +  VPPL      P P D       +D     + +  R+ +D      R K++N +L SLRC   +KL  A++FR+    +FPYN+DFRGRAYPVPP+L+ +GSD+CR +L FA  +PLG NGL WLK+HLANL G +K+SFD R  F ++ ME+++ +   P  G  WW   ++P+Q LA C EIV A++SGDP +++  +PVHMDGSCNGLQHYAALGRD+ G K VNL  +  P+DVY GV   VI+ V  +A        T+A    A +E  ++ + ARLV+GLI+R VVK+TVMTSVYGVTY+GAR QI  +++EK +  +KG  +  E E E+  A  Y+A++T+  + +LF+ AR  M WL+ CA L+A+QGQP+++V+P+G+PV+QPYR+ +   V TL+Q+V+L + +D LP+   RQ SAFPPN+VHSLDS+HML+TA  +Q  G+ F+AVHDSYW H  +VE MN  LRECFI LY QP+LE L+DS   R+P + FP +P +G+L L +VK +PYFF
Sbjct:  245 KYKELRRLQLQLEIESTEEAVMKCLSTWNSARDRSDHTTIPAIRKVVTSWYGSLTEAIELEQWLYLNGDNKTSSSSQLDTQSGEDGGESTNSNGLQKTDVARDRTIYGPLLCLLPPQKTAILLAHTALSCSVAGGELGSKVVSLAIYIAQALETEVNVSRALRVRASQRKWKMNNLEDEGDEVDGVVQMSTKPPNGSDSLSD-------NITVDKWVYTATH-LKRFLDE--LSGNGATSGDQKPLKGQGRLRPALVRKRCQDILLAEGFMG-EGDDDGTTAPKRPISLTDFAEWDPVLKVKLGAALIRLLLEHTSFSKRRGSSPEPAFFYSRKKTGEMKFNGFVTIHPELLK-IAMKEELSHDSSFISPRYMQNTRCQPMVVPPKDWKAVDDGGYETIKTEFMRTRHCKTQKDAIRHADLTQVFEGLNVLGRIPWKINQNVLDAACKCWDDGIALGDIPSQDNHQVPPL------PTPLDYRDFNLLDDDEKKVQVDAFRIYKDAITKHFRFKQKNMDLHSLRCSAMLKLNQAKKFRDFEEIFFPYNVDFRGRAYPVPPHLSIVGSDLCRALLMFAHPKPLGPNGLYWLKVHLANLAGANKMSFDGRAQFADDNMESIRAAVDNPFGGNDWWMGFDDPFQGLATCHEIVKAIDSGDPANYMCSLPVHMDGSCNGLQHYAALGRDKVGGKAVNLCIADEPQDVYIGVMHEVIRRVAEDAQEMLPFDETKADLTKAEKELMKKIKSARLVNGLIDRGVVKRTVMTSVYGVTYIGARNQISEKIEEKLE--DKGYDI-DEMEAEINMACGYLASLTMEVMGQLFTGARQTMNWLTACARLIAQQGQPVAFVSPVGVPVVQPYRQKRPFTVVTLLQNVVLSNDSDVLPLHRQRQVSAFPPNYVHSLDSSHMLLTAIEMQKRGLHFSAVHDSYWTHPCDVEEMNDILRECFIDLYSQPLLEDLKDSWELRYPSITFPDVPTKGELDLNDVKSAPYFF 1216          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|1210516907|dbj|GAX24396.1| (DNA-directed RNA polymerase, mitochondrial [Fistulifera solaris])

HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0
Identity = 369/946 (39.01%), Postives = 538/946 (56.87%), Query Frame = 0
Query:  229 RPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAK--LREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGN---QGVPLTMLLLHIADAVRTEVNFLR-LSETYGD--------RVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKE----AHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHY--LTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRA--EERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHT-FYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEE---RRQQ------RHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFF 1142
            +P S++    +L  L++  E     EA+ +Y++V +   +    + L +V+RQ+  W+ PM++A+         RE    D+       GPFL  +PP KLAVI  +  +   L + N    G P +++   +   V  EV   R L + Y +         V NIL ++        +        DG    D KIK      ++    +    +  LD  KE    +  L    +   R+  LE     Q    D+   GA       D  T  +   +  PA       T   K R  V L+E + R+M  +  +Q +   T R +PM++ P+PW     GGYL LKS I+R      Q +AL  A +  VY  LN L ++PWVIN  +LS  +E +AR + +GD+PS+ D  VPP    P  P           E G P   +   E R  R+      R+++RN++L SLRC   +KL  A++F++    YFPYN+DFRGR YP+ P+L+ +GSD+CRG+L+FAE +PLG  GL WLK+HLAN  G+DK++ ++R A+++E ++ V+ S   P  G  WW   ++P+Q LA C EI+AA++SGDPES++  +PVHMDGSCNGLQHYAALGRD  G K VNL ++  P+DVY+GV   VI+ V  EA++ +    +  E   R+Q+      R A+LVDGLI+R VVK+TVMTSVYGVTY+GAR+QIQ +++EK    E       E   EV+ A  Y+A +T+  ++++F+ A+  M WL+TCA ++ + G P++W++P+GLP IQPYRR K   V TL+Q V L++ ND LP+ +SRQ SAFPPNFVHSLD++HML TA  +   G+ F+AVHDS+W H  +++ MN  LR+ FI LYE+P+LE        R+PD+ FPP+P+RG L L EV+ + YFF
Sbjct:  142 KPPSID----RLEELQLWLECEAQQEAVLKYQKVIENARKRKDYSSLSLVQRQVLWWFQPMVDAIEKRQKDYIFREKSGDDVSKSAQRLGPFLCTLPPAKLAVIAAHTAIMETLTNSNNSLHGTPFSVIARQLGQVVEDEVIIQRVLHQRYKESQARTSVVNVSNILDDDATDDETEDDVVNSSNARDGGILGDGKIKAAEEDHTKRWTYSTSHLQNYLDELKEFKPKSQRLASFAIWRARQ-VLENDE--QWTERDKIQLGAALFKVLLDCATVKDGGKKGEPAFIFEKRWTRKDKSRAYVTLNEKL-RNMIVSDRLQSFSQTTTRQKPMILPPKPWTKPKEGGYLWLKSDILRYHGCDLQLEALNHANLNTVYDGLNSLSKIPWVINKRILSVAEECWARNIAIGDIPSKTDFEVPPEPIKPERPT-------QKLEKGHPEYDSYISEMRAYREARAKYDRMRQRNSDLVSLRCSVVLKLDQADKFKDFKEIYFPYNMDFRGRVYPITPHLSIVGSDLCRGLLKFAEAKPLGPRGLFWLKVHLANFAGKDKVTLEERAAYIDENIDKVRASVEDPFAGDRWWMTLDDPFQGLAACAEIIAAMDSGDPESYMCNLPVHMDGSCNGLQHYAALGRDAVGGKAVNLRNTDKPQDVYSGVMTEVIRRVAEEASQTIDFDTSNVEALTRKQKKILANNRAAKLVDGLIDRGVVKRTVMTSVYGVTYIGARQQIQEKIEEKL---EGLGCDIDEMNLEVFRACGYLARVTMEVISQVFTGAKETMNWLTTCARMITQLGYPVAWISPIGLPAIQPYRRKKSSKVVTLMQVVSLIESNDDLPLHTSRQVSAFPPNFVHSLDASHMLFTALEMDRRGLSFSAVHDSFWTHPCDIDEMNMALRDTFIELYERPLLEEQLADWKMRYPDLEFPPLPERGDLDLNEVRAAKYFF 1069          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|1210515022|dbj|GAX25985.1| (DNA-directed RNA polymerase, mitochondrial [Fistulifera solaris])

HSP 1 Score: 626.706 bits (1615), Expect = 0.000e+0
Identity = 365/947 (38.54%), Postives = 534/947 (56.39%), Query Frame = 0
Query:  238 EQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAK--LREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGN---QGVPLTMLLLHIADAVRTEVNFLR-LSETYGD--------RVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKE----AHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHY--LTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPL------------SGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHT-FYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEE---RRQQ------RHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFF 1142
            + L  L++  E     EA+ +Y++V ++  +    + L +V+RQ+  W+ P+++A+         RE    D+      +GPFL  +PP KLAVI  +  +   L + N    G P +++   +  AV  EV   R L + Y +         V NIL +         +        DG +  + KIK      ++    +    +  LD  KE    +  L    +   R+  LE     Q    D+   GA       D  T  +   +  PA       T   K R  V L+E + R+M  +  +Q +   T R +PM++ P+PW     GGYL LKS IVR      Q +AL  A +  VY  LN L ++PWVIN  +LS  +E +AR + +GD+PS+ D  VPP              GHP +                      E R  R+      R+++RN++L SLRC   +KL  A++F++    YFPYN+DFRGR YP+ P+L+ +GSD+CRG+L+FAE +PLG  GL WLK+HLAN  G+DK++ ++R A+++E ++ V+ S   P  G  WW   ++P+Q LA C EI+AA++SGDPES++  +PVHMDGSCNGLQHYAALGRD  G K VNL ++  P+DVY+GV   VI+ V  EA++ +    ++ E   R+Q+      R A+LVDGLI+R VVK+TVMTSVYGVTY+GAR+QIQ +++EK    E       E   EV+ A  Y+A +T+  + ++F+ A+  M WL+TCA ++ + G P++W++P+GLP IQPYRR K   V TL+Q V L++ ND LP+ SSRQ SAFPPNFVHSLD++HML TA  +   G+ F+AVHDS+W H  +++ MN  LR+ F+ LYE+P+LE        R+PD+ FPP+P+RG L L EV+ + YFF
Sbjct:  147 DNLEELQLWLECEAQQEAVLKYQKVIESARKRKDYSSLSLVQRQVLWWFQPLVDAIEKRQKDYIFREKSEGDVSKSAQRFGPFLCTLPPAKLAVIAAHTAIMETLTNSNNSLHGTPFSVIARQLGQAVEDEVIIQRVLHQRYKESQARASVLNVSNILDDEATDDEPENDDVNSSNARDGGFLGEGKIKAAEEDPTKRWTYSTSHLQNYLDELKEFKPKSQRLASFAIWRARQ-VLENDE--QWTERDKIQLGAALFKVLLDCATVKDGGRKGEPAFVFEKRWTRKDKSRAYVTLNEKL-RNMVISDRLQSFSQTTTRQKPMILPPKPWTKPKEGGYLWLKSDIVRYHGCDLQLEALNHANLNTVYDGLNSLSKIPWVINKRILSVAEECWARNIAIGDIPSKTDFEVPPEPIRPERPTQKLEKGHPEY-----------------DSYISEMRAYREARARYDRMRQRNSDLVSLRCSVVLKLDQADKFKDFKEIYFPYNMDFRGRVYPITPHLSIVGSDLCRGLLKFAEAKPLGPRGLFWLKVHLANFAGKDKVTLEERAAYIDENIDKVRASVEDPFAGDRWWMTLDDPFQGLAACAEIIAAIDSGDPESYMCNLPVHMDGSCNGLQHYAALGRDAVGGKAVNLRNTDKPQDVYSGVMTEVIRRVAEEASQTIDFDTSDVEALTRKQKKILANNRAAKLVDGLIDRGVVKRTVMTSVYGVTYIGARQQIQEKIEEKL---ESLGCDIDEMNLEVFRACGYLARVTMEVMGQVFTGAKETMNWLTTCARMITQLGYPVAWISPIGLPAIQPYRRKKSSKVVTLMQVVSLIESNDDLPLHSSRQVSAFPPNFVHSLDASHMLFTALEMDRRGLSFSAVHDSFWTHPCDIDEMNMALRDTFVELYERPLLEEQLADWKMRYPDLEFPPLPERGDLDLSEVRSAKYFF 1069          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|219127811|ref|XP_002184121.1| (rpot-like RNA polymerase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404352|gb|EEC44299.1| rpot-like RNA polymerase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 302/622 (48.55%), Postives = 415/622 (66.72%), Query Frame = 0
Query:  533 TPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRA--EERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRN-HTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEE---RRQQ------RHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFF 1142
            T R +PM+V P+PW   D GGY  L++ ++R      Q + L+   +  V+  LN LGRVPW IN  VL+  Q  +   + +GD+PS+ D    PL   P HP   +       E   PG  +  EE RL R+ W   RRVK+RN +L SLRC   +KL  AE+F+     +FPYN+DFRGRAYPVPP+L+++GSD+CRG+L+FAE +PLG  GL WLK+HLAN  G+DK+SFDDRV FV++ +E V+ SA  P  G+ WW   E+P+Q LA C EI+ A++ G+PESFL  +PVHMDGSCNGLQHYAALGRD  G K VNL     P+DVY GV   V++ V +EA R L    ++ E   R+Q+      R A+LV+GLI+R VVK+TVMTSVYGVTY+GAR+QIQ ++  K + +        E   E+++A  YVA++T+  + +LF+ AR  M WL+TCA ++ + G P++WV+P+GLP IQPYR+ K   + TL+Q+V L++ +D LP+   RQ SAFPPNF+HSLDS+HML+TA  +   G+ F+AVHDS+W HA +++ MN  LR+ F+ LY QP+LE L+ +   R+P++ FP IP+RG L L EVK + YFF
Sbjct:  576 TTRQKPMIVPPKPWSRPDEGGYKMLRTELLRYHGCNMQKEVLQNVDLSIVFDGLNALGRVPWRINQRVLTVAQRCWDNNIPLGDIPSKDDN---PLPEEPLHPKRQEQFW----EPETPGYESYVEEYRLYRESWNKFRRVKQRNMDLRSLRCSAMLKLDQAEKFKEFEEIFFPYNMDFRGRAYPVPPHLSNVGSDLCRGVLKFAEAKPLGPRGLYWLKVHLANFAGKDKMSFDDRVKFVDDNLEQVRLSAEDPFAGERWWMSLEDPFQGLATCLEIIDAIDCGNPESFLCSLPVHMDGSCNGLQHYAALGRDSVGGKAVNLCAYDEPQDVYVGVMHEVVRRVAAEAERQLDFDTSDLESLSRKQKKELSYNRAAKLVNGLIDRGVVKRTVMTSVYGVTYIGARQQIQEKIISKLEAQGHD---VDEMSNEIFQACGYVASLTMEVMGDLFTGARETMNWLTTCARMITQHGFPLAWVSPIGLPAIQPYRQKKAATIVTLLQTVTLINESDDLPIHKQRQVSAFPPNFIHSLDSSHMLLTALEMDRRGLTFSAVHDSFWTHACDIDEMNEALRDVFVDLYSQPLLERLKQTWEMRYPELEFPDIPKRGDLNLAEVKQAKYFF 1187          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|89148146|gb|ABD62816.1| (mitochondrial single-subunit RNA polymerase, partial [Polysphondylium pallidum])

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 346/921 (37.57%), Postives = 513/921 (55.70%), Query Frame = 0
Query:  243 LEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNG--------------VGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRE--NGMI----SLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQ-GQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFF 1142
            LE  FE      A   Y+++ +      ++  L  +K  +F WY P+I+  T      ++   S L +               V ++   L  +P  KL +I +N+ V+ IL    +G  +T ++ +I ++V  E   ++L + Y       L +  NG +    +++   R+A   LE     +D   KVG  +      V  I   C+++       ++G ++                                           E+ PA        ++ KK G++   + VY  M     +   +  R  PMVV P+PW   + G YLQ   FI+R+  SK Q  +L  + +  +Y  LN LG VPW  N +++S + EA+ +G  + DLPS+ D  +P     PS            +ED       ++ ++ RD  +  R+VK  N +L SLRCDT  KL +A++ + +TFYFP+N+DFRGR+YP+PP+LNH+GSD CR  L+FAE++ LG+ G  WLK+ +ANL G DK+SF+DRVAF  E +EN+ DSA RPL+G+ WW KA+ PWQ LA C E+  A+ SG+P +F S +P+H DG+CNGLQHYAALG DE GA +VNL+ S  P+DVYTGV   V + VH +A                  A+L+DG I RK++KQTVMTSVYGVT+VGAR QI+  L +K+Q           +E  +++A+ Y++  T + L ++F  AR+IM WL+ CA L+++Q G+ ++W TPLGLPV+QPYR+   + VKT++   ++V+ ND LPV S +QRSAFPPNF+HSLDSTHM +TA + +  G+ F +VHDS+W HAS ++ MN  LR  F+ L+ QP+LE LR+    R+P V  PP+P RG L L++V+DS YFF
Sbjct:   42 LETDFEISVTDTARKAYRQLLNDTSMIQRSTGLKSIKNVMFQWYDPLIKHTTQELKSFQQANASVLLSEDPEAEAEALNPLSRVPSHVEVLTRLPMKKLCLIALNQMVSEILSDPQRGTIMTSIVENIGESVLAEYQ-MQLLKKYDRLQYKRLMKPFNGAVATVRTIQNYMRRAHNNLEQ---ESDTITKVGSFM------VKSIMDSCMINKY-----IDGEDID------------------------------------------EKVPAFYYKYRYNNN-KKYGVISCHDNVYSLMDEGHFLVEAMNARLLPMVVPPQPWTHPNKGCYLQYPCFIMRTNGSKLQKTSLYQSDLTNIYEGLNVLGEVPWKTNEKMMSILLEAWEKGGGIADLPSRYDFELPE---SPS------------QED------LQDEKVKRDFNKKLRKVKGANNDLHSLRCDTLYKLNVAKQLQEYTFYFPHNVDFRGRSYPIPPHLNHMGSDFCRSTLKFAEEKELGERGFEWLKVQVANLFGVDKVSFEDRVAFTMENIENIYDSADRPLDGKRWWLKADSPWQTLAACIELTDAIRSGNPTTFKSSLPIHQDGTCNGLQHYAALGGDELGALKVNLLPSPKPQDVYTGVAQMVAQIVHEDALAG------------DELAKLLDGKIERKIIKQTVMTSVYGVTFVGARMQIENALSDKYQ----------IDEATLFKATTYLSKTTFASLDKMFIGARSIMAWLAQCAGLISKQTGECVAWYTPLGLPVVQPYRKGGKVSVKTIMNDYLMVEDNDHLPVDSRKQRSAFPPNFIHSLDSTHMFLTAIQCKKKGITFASVHDSFWTHASTIDTMNTMLRHQFVELHSQPILERLREWFNHRYPTVNIPPVPNRGSLDLKKVRDSKYFF 861          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|290976388|ref|XP_002670922.1| (predicted protein [Naegleria gruberi] >gi|284084486|gb|EFC38178.1| predicted protein [Naegleria gruberi])

HSP 1 Score: 621.698 bits (1602), Expect = 0.000e+0
Identity = 346/908 (38.11%), Postives = 496/908 (54.63%), Query Frame = 0
Query:  247 FEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGP----------FLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQ-IARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1143
             E  ++  A A Y++   +     ++A LP  K+ +  WY P+ + +     ++         +   T             +L  +  +KLA+IT++E +   L+    G P++ +   I DA++ E+N  +L  T       ++ +N MI                                  H + KIS                       +  L + +      L Q G      A ST  +   +   E  PA  I    T + K  G+V  D+ +   +      Q  L P + PM+V P PW S  +GGY+ LK  I+R++ S  Q   L+ A + ++   LN L    W IN  V  T+ + +  G  +G+LPS+ D+ +P        P   DP +                   + +W+    ++K  N  L SLRCD  +KL +AE+F+++TFYFP+N+DFRGRAYP+PP+LNHLG+D+ RG+L F +  P+GK G+ WLKIHLANL G+DKL FD+RV FV+E +  + DSA +PL G  WW K+E PWQ LA C E+   + S +PE FLS +P+ MDGSCNGLQHYAALGRD  GA  VNL+ ++ P DVY GV + V KH+  +             +   + A+L+ G + R  +KQTVMTSVYGVT+VGAR+QIQ RLKEK           +  E +V+  + Y+A+ITL  L E+FS+A+NIMEWL+ CA L++    P+SW+TPLGLPVIQPYR  +  +VKT++QS+ L D +DKLPVS +RQ+SAFPPN+VHSLDS+HM MTA+  Q  G+ F AVHDS+WC+A NV+ MN  +RE FI L+ QP+LE L  +    +P + FPP+P++G L L  V D+PYFFD
Sbjct:  134 LETRSMDIAKARYRKDLKSATSRNQSACLPPAKKIMLEWYEPLTKIIREKQDEVNFSCSKKKSSSTNTTTTTSQDNFAIPLYLTSISAEKLAIITLHELLASCLKERG-GSPVSSISYQIGDAIQAEINVEKLKRT---NYFKLIIKNQMI---------------------------------YHNINKIS-----------------------KLKLNEYVTFTKEELVQLGSYLIQLALSTAHVPLISNPKETVPAF-IHRNITRNSKIIGVVEPDDNLLHLIGREHVAQEILYPNHLPMLVPPNPWTSSTAGGYIALKVLIMRTRGSHLQAYTLKSAELNDLLSGLNTLNETRWRINPTVYETVLKVWNSGGGLGELPSRFDDTLP------EEPETDDPEI-------------------KKKWKRTVEKIKTHNRNLHSLRCDMLLKLKVAEDFKDNTFYFPHNIDFRGRAYPIPPHLNHLGADINRGLLTFEKGMPIGKRGIFWLKIHLANLYGKDKLPFDERVQFVDEYINEIIDSADQPLEGNRWWLKSENPWQTLAACVELAECLRSPNPEEFLSHLPIQMDGSCNGLQHYAALGRDNLGALHVNLLPTSKPMDVYVGVLEVVKKHIERDM------------KAGNKLAKLLHGNVYRSTIKQTVMTSVYGVTFVGAREQIQKRLKEK----------KEVPEDDVFACASYLASITLKSLGEVFSSAQNIMEWLNDCALLISSSDTPVSWITPLGLPVIQPYRSKRSKIVKTVMQSITLADSSDKLPVSRTRQKSAFPPNYVHSLDSSHMFMTASACQKEGIEFAAVHDSFWCNAGNVDRMNTIIREQFINLHSQPLLEELNATFTNLYPQIQFPPLPKKGSLDLTRVLDAPYFFD 933          
BLAST of EWM26144.1 vs. NCBI_GenBank
Match: gi|635366797|emb|CCI44962.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 620.928 bits (1600), Expect = 0.000e+0
Identity = 382/959 (39.83%), Postives = 532/959 (55.47%), Query Frame = 0
Query:  205 PESVQGGGSHEGLQQIKEHLAPHARPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKR--VNRKAREALED-----GVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHG---LEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALTSANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYL--TPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPSHPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHT-FYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARP--LNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEER----RQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANR-LQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1143
            PE +Q   S + L+ +K   A   R             LE A  +  + + L+    V+  + + G+A+ +   +  +  W  P I  +      +  GK S L + +  YGP L+L+    LA +T+N  +N  L   ++G+    L L + + V+  +     +E    R      E   +SL R   N   R+ +ED     GVW   L +KVG  L+  + R   +    L+   K+AHG   +  PE               + P+ +QA                            +        ++ G+  + + ++  +       + L  T RY PM+V P+ W++ ++GGYL+L + I+R ++   Q D ++ A + E++  LN L  VPWVIN E+L  I   +  G   GDLP++ D  +P         P    ALL A                        +V++RN EL SLRCDT  KL +A+EFRN    YFPYNLDFRGR YP+PPNLNHLGSDM R +L F +++PLGK+GLRWLKIHLAN+ G DK  FD+RVAF E  +  V  SA+ P  +    WW+ AE P+ AL VC E+  A+ES DPE++LS +PVH DGSCNGLQHYAALGRD +G +QVNL+ ++ P DVY  V ++V+  V+ +A   +   AT E +     ++R A  + G I R+VVKQTVMTSVYGVT++GARKQIQARL+E       G +  +E +Q++Y++S Y A IT+  L  LF++ARNIMEWL  CAS VA +GQ MSW+TPLGLPV+QPYRR     V+T +Q V++V   D LPVS  RQ++AFPPNFVHSLDSTHMLMTA + L+   + F AVHDSYW HA +VE MN  LRE F+ LYE+P+LE L + L  RFP   F  IP+ G+L+L  V  S YFF+
Sbjct:  149 PEQIQKCKSQQELKDLKRLFARQIR-------------LECAIYDMAVEKHLS----VRQDVGKLGRASQVNAAQNLVVGWMEPAISLIAKEQRDVLAGKRS-LDSTI--YGPALLLLDAKVLAALTINTMLNNCLME-SKGIRFIKLALALGNIVQEHI-----AENKRKRKD---EEKYFLSLVRGIQNDVFRKHMEDVYTTVGVWDKRLNLKVGAALIDFIQRSCYVPDRLLMAADKKAHGDIEMYNPE---------------RIPKKEQA---------------------------FVHCYYYDRNRRSGMFKIHDTIFNLILNTDPGLNVLPWTARYLPMLVPPKRWENPNNGGYLKLHTKIMRQRDIVWQMDCVKRAPLNELFTTLNLLAEVPWVINHEILDVILRIWQEGGGFGDLPTREDYPLPTSKPEEEEDPEKRQALLKAHA----------------------KVRQRNRELHSLRCDTLYKLQVAQEFRNEKEIYFPYNLDFRGRVYPIPPNLNHLGSDMSRSLLLFRDRKPLGKDGLRWLKIHLANVFGVDKCPFDERVAFTESNLTKVFASASDPHGIGEAAWWKTAEYPFLALGVCFELKRALESPDPETYLSNIPVHQDGSCNGLQHYAALGRDLKGGEQVNLVPASRPGDVYIKVAEQVMNIVNRDANLEIPEDATPERKISLAHRKRCATFLLGTITRRVVKQTVMTSVYGVTFIGARKQIQARLQEA--NISNGSLSDEEMDQQIYDSSCYAAEITMESLRNLFTSARNIMEWLGDCASKVAEEGQLMSWITPLGLPVVQPYRRFGCQQVRTKVQHVLMVS-TDHLPVSPGRQKTAFPPNFVHSLDSTHMLMTAKKCLEEDDIAFAAVHDSYWTHACSVETMNKRLREEFVRLYERPLLEDLLEQLELRFPTTKFRKIPKLGELQLRNVLQSEYFFN 1011          
The following BLAST results are available for this feature:
BLAST of EWM26144.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108138|gb|EWM26144.1|0.000e+0100.00rpot-like rna polymerase [Nannochloropsis gaditana... [more]
gi|298708570|emb|CBJ30655.1|0.000e+041.84mitochondrial DNA-directed RNA polymerase [Ectocar... [more]
gi|676380291|ref|XP_009033424.1|0.000e+043.96hypothetical protein AURANDRAFT_20280 [Aureococcus... [more]
gi|223995603|ref|XP_002287475.1|0.000e+038.07rpot-like RNA polymerase [Thalassiosira pseudonana... [more]
gi|1210516907|dbj|GAX24396.1|0.000e+039.01DNA-directed RNA polymerase, mitochondrial [Fistul... [more]
gi|1210515022|dbj|GAX25985.1|0.000e+038.54DNA-directed RNA polymerase, mitochondrial [Fistul... [more]
gi|219127811|ref|XP_002184121.1|0.000e+048.55rpot-like RNA polymerase [Phaeodactylum tricornutu... [more]
gi|89148146|gb|ABD62816.1|0.000e+037.57mitochondrial single-subunit RNA polymerase, parti... [more]
gi|290976388|ref|XP_002670922.1|0.000e+038.11predicted protein [Naegleria gruberi] >gi|28408448... [more]
gi|635366797|emb|CCI44962.1|0.000e+039.83unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4588rna4588Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications