EWM26115.1, cds4551 (CDS) Nannochloropsis gaditana

Overview
NameEWM26115.1
Unique Namecds4551
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:924028..926336 -
Alignment locationCM002463.1:923364..923910 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26115.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100014g41.9292.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:924028..926336 -
CM002463.1supercontigCM002463.1:923364..923910 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|585108109|gb|EWM26115.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 1949.87 bits (5050), Expect = 0.000e+0
Identity = 951/951 (100.00%), Postives = 951/951 (100.00%), Query Frame = 0
Query:    1 METPVCIYADPSGKNGSLDKTSPMRAPGREGGHIREKLEVLTSAEPSGSPPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGSEGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVHSLTTEVDEDVSFSLALVGSPEMATPVVMQTRWLADENCGEITVEPLRLDQAKEEAVAVRRRALGQLEPNKVGRQGCREGDGGVAKGKGPSKGHSRGSIGNCPLMSPVDALAPKLQSGASTVTPCRGNNPRGALPQGPAPASVKKPATKKRSKSLPSHGGHACEKPSIEDFKVGVAVKDASETSASVTSSGLVAIKSSVPMRRSALVAPPLAHSRAAAASVRAPPLAGVQPHHPLKRRPYDPFAPVTRPKRGKNAYEGPSKAMRDLEAKRAAEEAGSKTQDFFLERVAREDILREMRIASVLEARRERILATTSGGWDEQTPSFVEAGPFSTVTTWGGLREKHRRDTENLRLNFKAEHDRLRSRFLEAVERERLMFHIQKHALPSCVRDPLGFLWWHSSRLPIKKQWGRYRAFPQQSLEVMALTGQPDVANRRFSLSGVIASFKAQVARTLRRQQVEADALAALQCMDLPFIRPSPIQVSYPYVDDFAIQDPVGQHLKLAEKDDDAANVLPDANTTHASAAKVGGANVARHPASVTPSVTT 951
            METPVCIYADPSGKNGSLDKTSPMRAPGREGGHIREKLEVLTSAEPSGSPPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGSEGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVHSLTTEVDEDVSFSLALVGSPEMATPVVMQTRWLADENCGEITVEPLRLDQAKEEAVAVRRRALGQLEPNKVGRQGCREGDGGVAKGKGPSKGHSRGSIGNCPLMSPVDALAPKLQSGASTVTPCRGNNPRGALPQGPAPASVKKPATKKRSKSLPSHGGHACEKPSIEDFKVGVAVKDASETSASVTSSGLVAIKSSVPMRRSALVAPPLAHSRAAAASVRAPPLAGVQPHHPLKRRPYDPFAPVTRPKRGKNAYEGPSKAMRDLEAKRAAEEAGSKTQDFFLERVAREDILREMRIASVLEARRERILATTSGGWDEQTPSFVEAGPFSTVTTWGGLREKHRRDTENLRLNFKAEHDRLRSRFLEAVERERLMFHIQKHALPSCVRDPLGFLWWHSSRLPIKKQWGRYRAFPQQSLEVMALTGQPDVANRRFSLSGVIASFKAQVARTLRRQQVEADALAALQCMDLPFIRPSPIQVSYPYVDDFAIQDPVGQHLKLAEKDDDAANVLPDANTTHASAAKVGGANVARHPASVTPSVTT
Sbjct:    1 METPVCIYADPSGKNGSLDKTSPMRAPGREGGHIREKLEVLTSAEPSGSPPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGSEGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVHSLTTEVDEDVSFSLALVGSPEMATPVVMQTRWLADENCGEITVEPLRLDQAKEEAVAVRRRALGQLEPNKVGRQGCREGDGGVAKGKGPSKGHSRGSIGNCPLMSPVDALAPKLQSGASTVTPCRGNNPRGALPQGPAPASVKKPATKKRSKSLPSHGGHACEKPSIEDFKVGVAVKDASETSASVTSSGLVAIKSSVPMRRSALVAPPLAHSRAAAASVRAPPLAGVQPHHPLKRRPYDPFAPVTRPKRGKNAYEGPSKAMRDLEAKRAAEEAGSKTQDFFLERVAREDILREMRIASVLEARRERILATTSGGWDEQTPSFVEAGPFSTVTTWGGLREKHRRDTENLRLNFKAEHDRLRSRFLEAVERERLMFHIQKHALPSCVRDPLGFLWWHSSRLPIKKQWGRYRAFPQQSLEVMALTGQPDVANRRFSLSGVIASFKAQVARTLRRQQVEADALAALQCMDLPFIRPSPIQVSYPYVDDFAIQDPVGQHLKLAEKDDDAANVLPDANTTHASAAKVGGANVARHPASVTPSVTT 951          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|299116033|emb|CBN74449.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 213.772 bits (543), Expect = 3.583e-53
Identity = 126/315 (40.00%), Postives = 170/315 (53.97%), Query Frame = 0
Query:   68 GRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGS---EGLLLGQIHAKGLITN--LIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFG--AVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRF--------------------QQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALS 355
            G V+S+ LTPDG YV A    G +RLY+    + G+    G ++ QI +KG+ +N  +  HVE ++DGRF FAG+LRGS EM A D++ LPR      L AG  E   +N S+     LI  +++ D KL+GFG  AV R  P R   G              YRL CG GIKN+H+W F                        +       W C++D  +NG ++EL+  R GGLE +SKS   N+RVWDLSS EK+ +  + DI N++D R V GD+A+GG   LSLV+LDA    NRME+     V+S  LS
Sbjct:   34 GLVSSLALTPDGCYVFAAFGGGEVRLYAQALRTVGAASRSGTIVAQIKSKGMFSNTRVECHVEASEDGRFIFAGLLRGSSEMLALDISDLPRWRT---LPAG--EEASLNASRVDLNRLIRTYSHSDGKLKGFGAAAVVRTGPARREWG------------KRYRLFCGRGIKNIHVWSFVPDLASGGGAAGGSGGGGGGGGRGKSSRGGGQWTCLYDTHTNGATVELVAFRNGGLEGISKSTDANVRVWDLSSEEKQTKPSFRDISNSKDTRVVFGDFAYGGATVLSLVKLDAPPVANRMEIGRHRPVASDTLS 331          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|673017908|ref|XP_008862915.1| (hypothetical protein H310_01560 [Aphanomyces invadans] >gi|574482118|gb|ETW09110.1| hypothetical protein H310_01560 [Aphanomyces invadans])

HSP 1 Score: 197.593 bits (501), Expect = 1.818e-48
Identity = 139/381 (36.48%), Postives = 187/381 (49.08%), Query Frame = 0
Query:   50 PPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGS-------------------------EGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDL--TRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQG--SQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGAT 401
            PPK EA        F    +V+SV +   G +V+AG ++GT+RLY    P  GS                         +G++L  I A+G+ T L  +V + DDGRF FAGV RGS E+   ++   RLP        DA G    +VN            H+  DAKLRGFGAV R  P   +S +            EY+++CGLGIKNLH+WRF     S  E S  TW+CIFD  +NG+S+E L   +   + +SKS  Q +RVW +          + DI  TQD   VCG+YAFGG  +L+LV LD+     R+EL LP++V   A      ++RQL +V     T   G   G  L VCSDG V  ++    T
Sbjct:   85 PPKAEAVPEQTSNSFALDFQVSSVAIDRAGRFVVAGFNNGTIRLY----PLRGSAAPVVIGSLETEDTASLDENKLVFRKGVVLEHISARGMYTQLRVNVVIPDDGRFIFAGVYRGSTEILVIEIESIRLPT-------DAVGVPTAEVN-----------THSYSDAKLRGFGAV-RAMPGSNSSTVTT----------EYQVLCGLGIKNLHLWRFYWDPMSDDEESKWTWQCIFDRQTNGISLEYLAFGSAPNQIISKSEHQTVRVWTIDETSDAMTFDFNDIKQTQDTVQVCGEYAFGGQERLALVNLDSA---QRIELDLPSSVVPTARPTLNNRKRQLRTV-----TLLAGIPHGITLGVCSDGSVFAHDMASET 424          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|698776042|ref|XP_009821065.1| (hypothetical protein H257_00197 [Aphanomyces astaci] >gi|574123190|gb|ETV88665.1| hypothetical protein H257_00197 [Aphanomyces astaci])

HSP 1 Score: 193.356 bits (490), Expect = 3.540e-47
Identity = 136/387 (35.14%), Postives = 189/387 (48.84%), Query Frame = 0
Query:   39 EVLTSAEPSGSPPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGS----------------------EGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDL--TRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQGSQV--ECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTG 399
            EV   A+PS    + +A  +     F    +V+SV +   G +V+AG ++GT+RLY +   S                         +G++L  I A+G+ T L  +V + DDGRF FAGV RGS E+   D+   RLP        D  G    +VN            H+  DAKLRGFGAV R  P+   S L   E         Y+++CGLGIKNLH+WRF        + S  TW+CIFD  +NG+S+E L   A   + +SKS  Q++RVW +          + DI  TQD   VCG YAFGG  +L++V LD      R+EL LP++V+  A      ++RQL +V  +      G   G  L VCSDG V  ++  G
Sbjct:   72 EVFFDAKPS----QADAVHAHTPNNFALDFQVSSVAVDRAGRFVVAGFNNGTIRLYPLSGCSTAPVVVGSLETDATASIDENKLVFRKGVVLEHISARGMYTQLRVNVVIPDDGRFIFAGVYRGSTEILVIDIDSIRLPT-------DVVGVPTAEVN-----------THSYSDAKLRGFGAV-RAMPSSQPSSLVTTE---------YQVLCGLGIKNLHLWRFYWDPTCRDDDSKWTWQCIFDRQTNGISLEYLAFGAAPNQIISKSEHQSIRVWTIDETADAMTFDFDDIKQTQDTVQVCGQYAFGGQERLAMVSLDTA---QRIELDLPSSVAPTARPTLNNRKRQLRTVTLLC-----GVPDGITLGVCSDGSVFAHDMAG 418          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|813123839|ref|XP_012196567.1| (hypothetical protein SPRG_02611 [Saprolegnia parasitica CBS 223.65] >gi|641539098|gb|KDO32919.1| hypothetical protein SPRG_02611 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 182.956 bits (463), Expect = 6.139e-44
Identity = 138/396 (34.85%), Postives = 194/396 (48.99%), Query Frame = 0
Query:   54 EAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSML-------------------HPSWGSEGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRF--QQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKD----RAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLP-TTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVHSLTTEVDEDVSF 423
            +A  S P   F    +V+SV +   G +V+AG ++GT+RLY ++                   +     +G++L  I A+G+ T L  HV + +DGRF FAGV RGS E+   D            +D+     E + +  A     +  H+  DAKLRGFGAV      RA  G             EY+++CGLGIKNLH+WRF     S  + S  TW+C+FD  +NG+S+E L    G  + +SKS  Q +RVW LS     D       YTDI +T D   V G YA+GG+ +L+LV LD      R EL LP +T  + A      ++RQL +V ++      G   G  L +CSDG V  ++ T A +A G    VH+  T V    SF
Sbjct:   90 KATPSTPANHFALDFQVSSVAVDRAGRFVVAGFNNGTIRLYPLVDNFKRGIDVGTVEVSSVDANALVFRKGVVLEHITARGMYTTLRVHVVIPEDGRFIFAGVYRGSTEILVID------------IDSIVLPTEAIGVPTAE----VVTHSYNDAKLRGFGAV------RAVPGDSLITT-------EYQVLCGLGIKNLHLWRFYWDPNSDDDESKWTWQCVFDRQTNGISLEYLAFGPGPNQVISKSEHQAIRVWTLSEATSDDGTIASFEYTDIKHTTDAVEVFGHYAYGGSERLALVDLDNS---KRFELDLPSSTAVASARPTLNFRKRQLRTVSNLT-----GDAMGVTLGMCSDGSVFVHKAT-ADAALG----VHTPPTYVQGYESF 443          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|669148166|ref|XP_008609645.1| (hypothetical protein SDRG_05694 [Saprolegnia diclina VS20] >gi|530738622|gb|EQC36864.1| hypothetical protein SDRG_05694 [Saprolegnia diclina VS20])

HSP 1 Score: 181.03 bits (458), Expect = 3.386e-43
Identity = 133/385 (34.55%), Postives = 191/385 (49.61%), Query Frame = 0
Query:   54 EAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSML-------------------HPSWGSEGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRF--QQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKD----RAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKA----KRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVP 409
            +A  S P   F    +V+SV +   G +V+AG ++GT+RLY ++                   +     +G++L  I A+G+ T L  HV + +DGRF FAGV RGS E+   D            +D+     E + +  A     +  H+  DAKLRGFGAV      RA  G             EY+++CGLGIKNLH+WRF     S  + S  TW+C+FD  +NG+S+E L+   G  + +SKS  Q +RVW LS     D       YTDI +T D   V G YA+GG+ +L+LV LD      R EL LP   SS A++  +     ++RQL ++ ++      G   G  L +CSDG V  ++ T A +A G   P
Sbjct:  108 KATPSTPANHFALDFQVSSVAVDRAGRFVVAGFNNGTIRLYPLVDNFKRAIDVGVVEVSSVDANALVFRKGVVLEHITARGMYTTLRVHVVIPEDGRFIFAGVYRGSTEILVID------------IDSIVLPTETIGVPTAE----VVTHSYNDAKLRGFGAV------RAVPGDSLITT-------EYQVLCGLGIKNLHLWRFYWDPSSDDDESKWTWQCVFDRQTNGISLEYLSFGPGPNQVISKSEHQAIRVWTLSEATADDGTIASFEYTDIKHTTDAVEVFGHYAYGGSERLALVDLDNS---KRFELDLP---SSSAVAAARPTLNFRKRQLRTLSNLT-----GDPMGVTLGMCSDGSVFVHKAT-ADAALGVHTP 451          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|1173951467|gb|OQR99341.1| (hypothetical protein ACHHYP_06906 [Achlya hypogyna])

HSP 1 Score: 176.022 bits (445), Expect = 1.300e-41
Identity = 135/389 (34.70%), Postives = 188/389 (48.33%), Query Frame = 0
Query:   39 EVLTSAEPSGSPPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGS-------------------EGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTR--LPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRF--QQGSQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRA----PYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLP-TTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTG 399
            EVL  +  S SP K E         F    +V+SV +   G +V+AG ++GT+RLY ++     S                   +G++L  I A+G+ T L  HV + +DGRF FAGV RGS E+   D+    LP    G                   AE++   H+  DAKLRGFGAV      RA  G             EY ++CGLGIKNLH+WRF     S+ + S  TW+C+FD  +NG+S+E L+   G  + +SKS  Q +RVW LS     D +     Y DI +T D   V G YA+GG+ +L+LV L+      R EL LP +T  + A      ++RQL +V  +      G   G  L +CSDG V  ++ T 
Sbjct:   75 EVLFDSPSSASPSKVEPPAHT--NHFALDFQVSSVAVDRAGRFVVAGFNNGTIRLYPLVDNFKRSIDVGTIEVNNLDSNSLVFRKGVVLEHITARGMYTTLRVHVVIPEDGRFIFAGVYRGSTEILVIDIASIVLPSETIG----------------VPTAEVV--THSYNDAKLRGFGAV------RAVPGDSLITT-------EYLVLCGLGIKNLHLWRFYWDPSSEDDESKWTWQCVFDRQTNGISLEYLSFGPGPNQLISKSEHQAIRVWTLSDDVADDGSVASFTYKDIKHTHDAVDVFGHYAYGGSERLALVDLETA---KRFELDLPSSTAVAAARPTLNFRKRQLRTVSCLT-----GDVMGVTLGMCSDGSVFAHKATA 422          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|1173955683|gb|OQS02614.1| (zinc phosphodiesterase ELAC protein 2 isoform 2 [Thraustotheca clavata])

HSP 1 Score: 176.792 bits (447), Expect = 2.947e-41
Identity = 138/409 (33.74%), Postives = 193/409 (47.19%), Query Frame = 0
Query:   43 SAEPSGSPPKTEAKCSIPLRRFTPSGRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGS-------------------EGLLLGQIHAKGLITNLIFHVEV-------------ADDGRFAFAGVLRGSVEMFAYDLTR--LPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQG--SQVECSAPTWECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRA----PYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVH 411
            S E S SP K  A        F    +V+SV +  +G +V+AG ++GT+RLY ++     S                   +G++L  I A+G+ T L  HV +              +DGRF FAGV RGS E+   D+    LP    G                   AE++   H+  DAKLRGFGAV      RA  G             EY+++CGLGIKNLH+WRF     S  + S  TW+C+FD  +NG+S+E L    G  + +SKS  Q++RVWDLS    +D +     YTDI +T D   V G YA+GG  +L+LV LD      R EL LP +   +A      ++RQL +V ++      G   G  L +CSDG V  ++ T  +       PV+
Sbjct: 1644 SYEASSSPGK--ADIVTQTNHFALDFQVSSVAVDREGRFVVAGFNNGTIRLYPLVDNFKRSIDVGTVEVNTLDNNSLVFRKGVVLEHITARGMYTTLRVHVVIPGTSFHCCKANLSIEDGRFIFAGVYRGSTEILVIDIESIVLPTDTIG----------------VPTAEVV--THSYNDAKLRGFGAV------RAMPG-------DSNITTEYQVLCGLGIKNLHLWRFYWDPTSDDDESKWTWQCVFDRQTNGISLEYLAFGPGPNQLISKSEHQSIRVWDLSDATTEDGSIASFEYTDIKHTHDAVHVFGHYAYGGKERLALVDLDNS---KRFELELPASTVVQARPSMNFRKRQLRTVSNLT-----GDPIGVTLGMCSDGSVFVHKATSDSELGVHTPPVY 2011          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|301101435|ref|XP_002899806.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102808|gb|EEY60860.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 165.236 bits (417), Expect = 4.952e-38
Identity = 101/296 (34.12%), Postives = 155/296 (52.36%), Query Frame = 0
Query:   77 PDGAYVIAGCSDGTLRLYSMLHPSW-GSEGLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDL--------TRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGAVTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQGSQVECSAPTWECIFDLASNGMSIELL----TVRAGGLEAVSKSCGQNLRVWDLS----------SLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTV 349
            P+G +++ G  +G + LY +   S     G+LL QI  +G+ T ++  V + +DG+F FAGV RGS E+ A+++        T + + H  + L A    +ED   +          HT  DAKL+GF A   +                 ++  EYRL+CG+GIKN+H+WRF Q S ++     WEC+FD  +NG+S+E +    TVR   L   SKS  QN+R+W L           ++ KK    +TD+  T D  AV GDYA+GG+  L+++ L +    +RM+L LP +V
Sbjct:  229 PNGKFLVVGFYNGMVYLYPLTKDSLVFRRGVLLDQIMPRGMYTQIMVTVAIPEDGKFIFAGVYRGSTEIRAFEVDSIALPSSTDVQQAHKTQVLTADDSGDEDAANAFGQPSAKAVSHTYSDAKLKGFAAAKSL-------------YHKGSQKTEYRLLCGIGIKNVHMWRFHQTSDLQWR---WECVFDKQTNGISLEFISFHPTVRDQFL---SKSEHQNVRIWHLEEDFDAAHNSVTVRKKS---HTDVKQTVDTVAVYGDYAYGGSESLAVIDLQSA---SRMDLGLPLSV 499          
BLAST of EWM26115.1 vs. NCBI_GenBank
Match: gi|224002689|ref|XP_002291016.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972792|gb|EED91123.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 163.31 bits (412), Expect = 2.156e-37
Identity = 116/342 (33.92%), Postives = 161/342 (47.08%), Query Frame = 0
Query:  105 GLLLGQIHAKGLITNLIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELL--IECHTNLDAKLRGFGAVTRVAPTRAASGLGAWE--MESEAEPPEYRLICGLGIKNLHIWRFQQGSQVECSAPTWECIFDLASNGMSIELLTVR--AGGLEAVSKSCGQNLRVWDLSSLEKK-----------DRAPYTDILNTQDIRAVCGDYAFGGTCQ----LSLVRLDA---CCELNRMELPLPTTVS-SKALSGGKAKRRQLCSVKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVHSLTTEVDEDV 421
            G +  QIHA+G+ T+L+  V V++DG +AF GV RGSVE+ A  L     G     LD   +  ED ++ K    LL  I+   + DAKL+GFGA  R+           WE  ++   E PEY L  G GIKN+HIW F+     +     W C++D  +NG SI  L  R  A GL  +SKS  Q LRVWDL+  +K+            R  Y D+ +T+    VCG YAF  +      ++L+ LDA       N  EL LP      +++   +  R+Q   +K VV   G        L+  SDG V  Y +  A        P     T +D D+
Sbjct:  293 GAVACQIHARGVHTSLLMDVAVSEDGLYAFGGVQRGSVELAAVYL-----GDVENYLDEHMQHEEDESIEKVTPGLLDLIQVDRHADAKLKGFGACARL--------WNGWERAVKGGGERPEYLLFTGKGIKNIHIWSFKPSRPEKGEESNWACLYDTQTNGTSISQLYFRHNATGLHGISKSDDQKLRVWDLTWEQKRVAEGRDDSDRPKRPSYVDVASTESTVGVCGTYAFALSAASEAIINLIPLDADDVSSPFNLTELALPQDSGMEQSVRPSRTGRQQRGELKSVVNVSGLEFDTTHALLNLSDGSVVHYSHDDAGHPLLLQCPPALTQTSIDADI 621          
The following BLAST results are available for this feature:
BLAST of EWM26115.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108109|gb|EWM26115.1|0.000e+0100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|299116033|emb|CBN74449.1|3.583e-5340.00conserved unknown protein [Ectocarpus siliculosus][more]
gi|673017908|ref|XP_008862915.1|1.818e-4836.48hypothetical protein H310_01560 [Aphanomyces invad... [more]
gi|698776042|ref|XP_009821065.1|3.540e-4735.14hypothetical protein H257_00197 [Aphanomyces astac... [more]
gi|813123839|ref|XP_012196567.1|6.139e-4434.85hypothetical protein SPRG_02611 [Saprolegnia paras... [more]
gi|669148166|ref|XP_008609645.1|3.386e-4334.55hypothetical protein SDRG_05694 [Saprolegnia dicli... [more]
gi|1173951467|gb|OQR99341.1|1.300e-4134.70hypothetical protein ACHHYP_06906 [Achlya hypogyna... [more]
gi|1173955683|gb|OQS02614.1|2.947e-4133.74zinc phosphodiesterase ELAC protein 2 isoform 2 [T... [more]
gi|301101435|ref|XP_002899806.1|4.952e-3834.12conserved hypothetical protein [Phytophthora infes... [more]
gi|224002689|ref|XP_002291016.1|2.156e-3733.92predicted protein [Thalassiosira pseudonana CCMP13... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4563rna4563Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications