EWM26124.1, cds4550 (CDS) Nannochloropsis gaditana

Overview
NameEWM26124.1
Unique Namecds4550
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:920889..920923 +
Alignment locationCM002463.1:921273..921531 +
Alignment locationCM002463.1:921622..923166 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26124.1
Productchaperonin
Orig transcript idgnl|cribi|Naga_100014g40.9301.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:920889..920923 +
CM002463.1supercontigCM002463.1:921273..921531 +
CM002463.1supercontigCM002463.1:921622..923166 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0016043cellular component organization
GO:0042026protein refolding
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom
IPR027413GROEL-like_equatorial
IPR027410TCP-1-like_intermed
IPR002423Cpn60/TCP-1
IPR001844Chaprnin_Cpn60
Homology
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|585108118|gb|EWM26124.1| (chaperonin [Nannochloropsis gaditana])

HSP 1 Score: 1238.79 bits (3204), Expect = 0.000e+0
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0
Query:    1 MTQTARRGTLPGGSVGTGTRTTMSIRPRSRQPLTLLLVLASCTLPSLAFLYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTEKTEGAINQM 612
            MTQTARRGTLPGGSVGTGTRTTMSIRPRSRQPLTLLLVLASCTLPSLAFLYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTEKTEGAINQM
Sbjct:    1 MTQTARRGTLPGGSVGTGTRTTMSIRPRSRQPLTLLLVLASCTLPSLAFLYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTEKTEGAINQM 612          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|585106610|gb|EWM24977.1| (chaperonin [Nannochloropsis gaditana])

HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0
Identity = 311/575 (54.09%), Postives = 425/575 (73.91%), Query Frame = 0
Query:   36 LLVLASCTLPSLAFLYQGGIRLTPRTHSV---RHS-TLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTEKTE 606
            ++V+A+  + + AFL    +    +T SV   R S T  MMAKNV+  +K   KLVEGIN+V NAVKVTLGP GRNVVL R     P+IVNDGVTIAR+I+L++ E NVGV+L+QEVA KSD +AGDGTTTS ++TQAIVNQG++ V +G NPV+LR+GI    ++L   +  MA+ V+  +DL +IATV+TGG+ +M  +IA  F  V  D+   G+T++E+  T +DE+E + G+ +DR GY + YFV D ER + ELRKPRVLVT   +   ++++P+LE +AK+ E L IV+E+   EALS LVVNK+RG+++V +++AP  G RRKQ LQDIA+ATGATF+  ++G+ L++ T EMLGVAE     ++ TT+ T+  + + I E +  ++RE+D  D+ +D++K Q RVAAL GG+A IKVGAATETELKDKKLRYEDALNSV++AIEMGV+PGGGS L+Y+ ++ R+EILA   D +E+AGA+IV +++  PV QIA NAG+  G V+E+I E +EWG+G NAA+G YENLL TGV+DSA VV+NAL NSASIAS+VLTT+ ++TE  E
Sbjct:   21 MVVMATLLVSTSAFLAPAALPELSKTRSVAARRGSLTTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLER-KYGVPEIVNDGVTIARDIELSDPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIQHTAKILCDTVKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAFELVG-DS---GSTVVEESQTVQDEVEFTEGLSIDR-GYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVSGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTNSNYAEAIKERILAIRREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVPGGGSTLLYM-LKKREEILAGMDDDDEKAGADIVFRSLSAPVMQIAENAGIDGGIVVERIFENQEWGWGYNAASGVYENLLNTGVVDSAKVVINALENSASIASMVLTTECLITEIPE 588          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|224004005|ref|XP_002291674.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973450|gb|EED91781.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 529.635 bits (1363), Expect = 2.233e-179
Identity = 286/568 (50.35%), Postives = 397/568 (69.89%), Query Frame = 0
Query:   43 TLPSLAFLYQGGIRLTPRTHSV----RHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKE-KREWGF--GMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTE 603
            T  S+ +L       T  ++S     R S+  + AK V F ++   KLV+GIN V NAVKVTLGP GRNVVL R +   P+IVNDGVTIAREI LA+ E NVGVRL+QEVA KSD +AGDGTTTS I+TQAIVN G+K V SG+NP++L  GI  +  M+A +I  +++K+ GVEDL+++AT+++G   DM +IIA  F +V  +    G+T++E+  T  DE+E + G+ +DR GY + YFV D ER V EL  PR+LVT+  + +  ++VP+LE++ KT E +L+++E+   +ALS LVVNK+RG+++V ++RAP  G RRK +LQDIA+ATGAT++  ++G+ L + T +MLG A+     +E TT+ T    ED +   +  +KRE +  D  +D  K Q RVAAL GG+A IKVGAATETELKDKKLRYEDALNSV++A E+G++PGGG+ L Y+  +  DEILAAF D+++RAGA I++K++ EP  Q+A NAG+    VL +I E  RE GF  G +A+   Y +L+E GV+D A V +NA+ NSAS+A LVLTT+ +VTE
Sbjct:    6 TALSMVYLASECSAFTANSNSFQATRRLSSTALSAKRVSFKEESRKKLVDGINQVANAVKVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREISLADPECNVGVRLVQEVASKSDSKAGDGTTTSTIMTQAIVNNGMKAVTSGVNPIALNAGIKKSAGMVAAKIKELSQKINGVEDLQSVATIASGS-VDMGRIIAQAFDKVGEN----GSTVIEESQTLFDEIEFTEGLTIDR-GYISPYFVKDQERQVAELVNPRILVTDAKIDNVNEIVPLLEQLVKTKEPVLMIAEDVTGDALSALVVNKMRGVLDVVAIRAPGFGQRRKAYLQDIAIATGATYVAEEVGITLDSVTTDMLGTADRCVIAKELTTIVTDGKQEDAVIARIAQIKREGEEADTDFDRDKAQERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYIQDQFTDEILAAFDDEDQRAGAAILMKSLSEPCCQVAENAGVEGAVVLSKIVELTREKGFGHGWDASKNNYCDLMEAGVVDPAKVTINAVENSASVAGLVLTTECLVTE 566          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|375332061|gb|AFA52570.1| (chaperonin [Vaucheria litorea])

HSP 1 Score: 514.612 bits (1324), Expect = 1.474e-173
Identity = 268/544 (49.26%), Postives = 383/544 (70.40%), Query Frame = 0
Query:   60 RTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTE 603
            ++H    S   M AK V FG++   KLVEGIN V NAV+VTLGP GRNVVL R +   P+IVNDGVTIAR+I L + E NVG RL+QEVA+KSD RAGDGTTT+ ++TQAIVN GL+ V SG NPV LR+GI  A+E L ++I  +++ V G++DL ++AT+++G    M  II+  F +V       G+T++E+  T  DE++ + G+ ++R GY + YFV D ER VCE+ KP++LVT+  +    +L+P+LE + K+ E L IV+E+   EALS LVVNK+RG+++VC+++AP  G RRK +LQDIA+ATGAT++  ++G+ L   T +MLG       ++E TT+ T     + +A+ +  +++E  + DN +D++K   R+AAL GG+A IKVGAATETELKDKKLRYEDALNSVR+A+EMG++PGGG+ +VYL    +D++ +   +++E  GA I+ K++  P +QIA NAG+  G V E+ +   E+GFG NAA  +Y +L E GV+D A V +NA+ NSAS+ASLVLTT+ ++TE
Sbjct:   29 KSHVSNKSPFMMAAKKVSFGEESRKKLVEGINQVANAVRVTLGPKGRNVVLER-NYGAPEIVNDGVTIARDISLEDPEHNVGARLVQEVAQKSDNRAGDGTTTATVMTQAIVNNGLRSVTSGANPVELRRGIKIASEFLIKQIKELSKPVNGIKDLNSVATIASGSAV-MGSIISQAFEKVGET----GSTVVEESQTLTDEVDFTEGLTIER-GYLSPYFVGDKERQVCEMLKPKILVTDRKIDQVNELIPLLESMVKSKEPLFIVAEDVTGEALSALVVNKMRGVLDVCAIKAPSFGDRRKAYLQDIAIATGATYVAEEVGISLDQVTDDMLGTCARLVVSKEGTTIVTDGAQAEAVAKRIEAIRKEKSSTDNQFDQEKCDERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMVYL-QRYQDKVCSLCANEDEVLGAGILFKSLSAPCKQIAYNAGVEGGVVWEKTR-NMEFGFGYNAAKDEYGDLFEMGVIDPAKVTINAIENSASVASLVLTTEALITE 563          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|399949629|gb|AFP65287.1| (60 kDa heat shock protein, CPN60 protein (nucleomorph) [Chroomonas mesostigmatica CCMP1168])

HSP 1 Score: 503.056 bits (1294), Expect = 1.317e-168
Identity = 265/568 (46.65%), Postives = 390/568 (68.66%), Query Frame = 0
Query:   46 SLAF---LYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTEKTEGAIN 610
            SL F   +Y+   + + R  +      +MMAK V F ++    LV GIN V NAVK+TLGP GRNVVL R     PQ++NDGVTIAR+I+L +   N G RL+QEVA K+D +AGDGTTTS ++TQ+IVNQG+K V SG+NP++L++GI   + +L + I T+AR   G+ED+ NIAT++ GG+ ++ +IIA+ F +V  +    G+T +E+  + +DE++ + GM LDR GY + YFV D ER + EL  PR++VT+  +    +LVP+LE V ++ ESLLIV+E+   EALS LVVNK+RG+++VC++R+P  G RRK +L+DIA+ TGAT+I  ++G+ L   +++ LG A      +E  T+ + +  ++ +   +  +K++++  D+ +D +K + R+A L GG+A IKVGAATETELKDKKLRYEDA+NS + AIEMGV PGGGS  ++L  ++  EI  +F D+EE+ GA IV KA+E P+ QIA+NAG     VL++  ++ E+G G NA+  K+ENL E+GV+D+A ++  AL NS SIA++VLTT+ +V E  E   N
Sbjct:   45 SLVFNAKIYKKAFKKSKRVET------QMMAKRVVFSEESRKSLVNGINAVANAVKITLGPKGRNVVLERT-LGSPQVINDGVTIARDIELEDPLENTGARLLQEVASKTDLKAGDGTTTSTVLTQSIVNQGIKAVASGVNPLALKRGIEKTSRLLVKEIKTLARPCNGIEDIRNIATIAAGGNEEIGRIIATAFEKVGEN----GSTTVEESQSLQDEVDFTEGMELDR-GYISPYFVKDMERQIAELIDPRIVVTDKKITSVQELVPLLEMVVRSKESLLIVAEDITGEALSTLVVNKMRGVLDVCAIRSPGFGERRKAYLEDIAILTGATYIAEEVGLTLDKISIDQLGKATRVVVAKEACTIISDKASQEKVNARIEQIKKQIENTDSDFDREKGEERIARLGGGIARIKVGAATETELKDKKLRYEDAINSTKAAIEMGVTPGGGSTFLHLTKKI-SEIRDSFIDEEEKLGATIVGKALEAPILQIAKNAGQEGEVVLDKC-QRMEFGMGFNASNNKFENLFESGVIDAAKIICWALENSCSIAAMVLTTEALVVEIPEKKKN 598          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|298707119|emb|CBJ29911.1| (chaperonin cpn60 [Ectocarpus siliculosus])

HSP 1 Score: 501.901 bits (1291), Expect = 3.849e-168
Identity = 264/537 (49.16%), Postives = 376/537 (70.02%), Query Frame = 0
Query:   67 STLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTE 603
            + L M AK+V FG+    KL +GIN V +AVKVTLGP GRNVVL RA    P+IVNDGVTIAR+I++ N E NVGV+L+QEVA+KSD RAGDGTTTS ++TQ IVNQG++ V SG NPV LR+GI  A+ M+ + I  +A  V   EDL N+AT+++G    M  IIA  F RV       G+T++E+  T  DE+E + G+ +DR GY + YF++D ER +CE + P++LVT+  +     L+P+LE + +  E LLI++E+   EALS LVVNK+RG+++V +V+AP  G RRK +LQDIA+ATG+T++  ++G+ L    +EMLG A+     +E TT+ +    ++ +   +  ++++ +  D+ +D++K   RVAAL GG+A IKVGAATETELKDKKLRYEDALNSVR+A+E+G++PGGG+ L YL   M +E  A    ++ +AG  I+++++  P+ QIA+NAG+  G V+ +  + +EWGFG NAA  +Y +LLE GVLD A V +NA+ NSAS+ASLVLTT+ ++ E
Sbjct:   70 TALSMGAKSVVFGEDARKKLADGINAVADAVKVTLGPKGRNVVLERA-YGAPEIVNDGVTIARDIEVENHEENVGVKLVQEVAQKSDNRAGDGTTTSTLLTQEIVNQGMRLVTSGANPVELRQGILAASGMIIEEIKKLAVPVGKNEDLLNVATIASGSST-MGGIIAKAFERVGDT----GSTVVEESQTLGDEVEFTEGLTIDR-GYLSPYFISDQERSLCEFKNPKILVTDKKIDQVNDLIPLLEAMVQAKEPLLIMAEDVVGEALSALVVNKMRGVLDVVAVKAPSFGERRKNYLQDIAIATGSTYVAEEVGLTLDQVKIEMLGTADRIVVMKEQTTIVSDGRNDEAVKARIKTIRKDAETSDSAFDKEKADERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALELGIVPGGGACLQYL-QRMDEEFRARVEGEDRKAGVGILMRSLSAPMMQIAKNAGVEGGIVVAKC-DNKEWGFGYNAANSEYCDLLEAGVLDPAKVTINAVENSASVASLVLTTECLIAE 597          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|1210525706|dbj|GAX15522.1| (chaperonin GroEL [Fistulifera solaris])

HSP 1 Score: 494.582 bits (1272), Expect = 9.617e-166
Identity = 266/550 (48.36%), Postives = 381/550 (69.27%), Query Frame = 0
Query:   57 LTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKE---KREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTE 603
              P     + S + + AK V F ++    LV+GIN V +AV+VTLGP GRNVVL R +   P+IVNDGVTIAREI L + E NVG +LIQEVA KSD +AGDGTTTS I+TQA+VN G+K V SG+NPV L +GI  A  ++   I  +A+ V G++DL+N+AT+++G   +M +IIA    +V  D    G+T++E+  T  DE+E + G+ +DR GY + YFV D ER V EL  P++LVT+  +     +VP+LE++ KT + LLI++E+   EALS LVVNK+RG+++V +++AP  G RR+++ QDIA+ATGA+F+  +LG+ L + T++MLG A+     +E TT+ T    ++ I   +  L+RE +  +N YD +K   R+A+L GG+A IKVGAATETELKDKKLRYEDALNSV++A E+G++PGGG+ L YL + M D+I+ A  D++E+ GA+I++KA+  P  Q+A NAG+    VL +I+E    + +G G +AA  +Y +L+E GV+D A V +NA+ NSASIA LVLTT+ +VTE
Sbjct:   18 FAPPKPPQQQSLVILDAKKVSFREQSRQALVDGINQVADAVRVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREIVLRDPEQNVGAKLIQEVASKSDSKAGDGTTTSTIMTQALVNNGMKAVTSGVNPVGLNRGIRKAARVITDEIKRIAKPVSGIDDLKNVATIASGS-IEMGRIIAMAADKVG-DT---GSTVVEESQTLVDEVEFTEGLTIDR-GYISPYFVKDQERQVAELVNPKILVTDAKIDDVNDIVPLLEQIVKTKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVIAKETTTIVTDGKQQEAIDARIAQLRREAENAENDYDAEKCTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYLQLTMEDKIMEAMDDEDEKQGAKILIKALGFPAMQVASNAGLEGAVVLAKIQELAMTKGFGHGWDAAAMEYCDLMERGVIDPAKVTINAIENSASIAGLVLTTECLVTE 560          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|1210532053|dbj|GAX09481.1| (chaperonin GroEL [Fistulifera solaris])

HSP 1 Score: 494.197 bits (1271), Expect = 1.375e-165
Identity = 265/542 (48.89%), Postives = 380/542 (70.11%), Query Frame = 0
Query:   65 RHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKE---KREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTE 603
            + S + + AK V F ++    LV+GIN V +AV+VTLGP GRNVVL R +   P+IVNDGVTIAREI L + E NVG +LIQEVA KSD +AGDGTTTS I+TQA+VN G+K V SG+NPV L +GI  A  ++   I  +A+ V G++DL+N+AT+++G   +M +IIA    +V  D    G+T++E+  T  DE+E + G+ +DR GY + YFV D ER V EL  P++LVT+  +     +VP+LE++ KT + LLI++E+   EALS LVVNK+RG+++V +++AP  G RR+++ QDIA+ATGA+F+  +LG+ L + T++MLG A+     +E TT+ T    ++ I   +  L+RE +  +N YD +K   R+A+L GG+A IKVGAATETELKDKKLRYEDALNSV++A E+G++PGGG+ L YL + M D+I+ A  D++E+ GA+I++KA+  P  Q+A NAG+    VL +I+E    + +G G +AA  +Y +L+E GV+D A V +NA+ NSASIA LVLTT+ +VTE
Sbjct:   25 QQSLVILDAKKVSFREQSRQALVDGINQVADAVRVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREIVLRDPEQNVGAKLIQEVASKSDSKAGDGTTTSTIMTQALVNNGMKAVTSGVNPVGLNRGIRKAARVITDEIKKIAKPVSGIDDLKNVATIASGS-IEMGRIIAMAADKVG-DT---GSTVVEESQTLVDEVEFTEGLTIDR-GYISPYFVKDQERQVAELVNPKILVTDAKIDDVNDIVPLLEQIVKTKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVIAKETTTIVTDGKQQEAIDARIAQLRREAENAENDYDAEKCTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYLQLTMEDKIMEAMDDEDEKQGAKILIKALGFPAMQVASNAGLEGAVVLAKIQELAMAKGFGHGWDAAAMEYCDLMERGVIDPAKVTINAIENSASIAGLVLTTECLVTE 559          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|160331651|ref|XP_001712532.1| (cpn60 [Hemiselmis andersenii] >gi|159765981|gb|ABW98207.1| cpn60 [Hemiselmis andersenii])

HSP 1 Score: 494.967 bits (1273), Expect = 1.671e-165
Identity = 263/567 (46.38%), Postives = 384/567 (67.72%), Query Frame = 0
Query:   40 ASCTLPSLAFLYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTEKTE 606
            +SC LP     ++  I     +       ++MMAK V FG++    LV GIN V +AVK+TLGP GRNVVL R     PQ++NDGVTIAR+I+L N   N G RL+QEVA K+D +AGDGTTTS ++TQ+IV QG+K V SG+NP++L++GI   ++ L + I  +A+   G+ED+ NIAT++ GG+ ++ +II++ F +V  +    G+T +E+  + +DE++ + GM LDR GY + YFV D ER + EL  PRV+VT+  +    +LVP+LE V +  E +LIV+E+   EALS LVVNK+RG+++VC++RAP  G R+K +L+DIA+ TGAT++  ++G+ L   T E LG A      +E  T+ +SE  ++ +   +  +K++++  D+ +D +K + R+A L GG+A IKVGAATETELKDKKLRYEDA+NS + AIEMGV PGGGS  ++L ++   EI  +F D+EE+ GA IV KA+E P+ QIA+NAG     VL++ + + E+G G NAA   YENL E+GV+D+A ++   L NS SIA++VLTT+ +V E  E
Sbjct:   35 SSC-LPQNKIFFKNQIS-NKVSRMNNFFNVKMMAKRVVFGEESRKSLVNGINAVADAVKITLGPKGRNVVLER-QMGSPQVINDGVTIARDIELENPLENTGARLLQEVASKTDLKAGDGTTTSTVLTQSIVTQGIKAVTSGVNPLALKRGIEKTSKFLVKEIKNLAKPCDGIEDIRNIATIAAGGNEEIGRIISTAFEKVGEN----GSTTVEESQSLQDEVDFTEGMELDR-GYISPYFVKDMERQIAELINPRVVVTDKKITSVQELVPLLEMVVRLKEPVLIVAEDITSEALSTLVVNKMRGVLDVCAIRAPGFGERKKAYLEDIAILTGATYLAEEVGLTLDKVTNEQLGKANRVVVAKEACTIISSEANQEKVNARIEIIKKQIENTDSEFDIEKGEERIARLGGGIARIKVGAATETELKDKKLRYEDAINSTKAAIEMGVTPGGGSTFLHL-IKKIPEIRDSFEDEEEKLGASIVEKALEAPILQIAKNAGQEGEVVLDKCR-RMEFGMGFNAANNSYENLYESGVIDAAKIICWGLENSCSIAAMVLTTEALVVEIPE 591          
BLAST of EWM26124.1 vs. NCBI_GenBank
Match: gi|676391243|ref|XP_009038899.1| (hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens] >gi|323450439|gb|EGB06320.1| hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens])

HSP 1 Score: 513.072 bits (1320), Expect = 3.158e-164
Identity = 276/536 (51.49%), Postives = 379/536 (70.71%), Query Frame = 0
Query:   68 TLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKEKREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVVVTE 603
            T ++ AK V FGD    +LV GIN V +AVKVTLGP GRNVVL RA    P+IVNDGVTIAR+I+L +  +N+G +LIQEVA KSD +AGDGTTTS ++TQ +VNQG+K V SG+NPV+LR+G++ AT+ L   +  +A+ V   ++L NIATV+T G+  M  IIA  F +V  D    G+T +E+  T  DE+E + G+ +DR GY + YFV D ER +CE+  P++LVT+  + +   L+P+LE   KT E L+I++E+   EALS LVVNK+RG+++V +++AP  G RRK  LQDIA+ATGAT++  ++G+ L T T EMLG  E     +E TT+ T     D + + +  +K E +  D+++D++K + RVAAL GG+A IKVGAATETELKDKKLRYEDALN+V++A++MG+LPGGGS L YL +  RD I  A  D++ER GA+IV  ++  PV QIA+NAG+    VL ++ E + +GFG NAATG+Y +L E GV+DSA V L+AL NSASIA LVLTT+ ++ E
Sbjct:   26 TTKLEAKKVLFGDASRAQLVAGINAVADAVKVTLGPKGRNVVLERA-YGAPEIVNDGVTIARDIELDDPAMNIGAKLIQEVASKSDSKAGDGTTTSTLLTQELVNQGMKAVSSGVNPVALRRGMSKATDALIVEVTALAKPVDSNDELLNIATVATSGNAVMGAIIAKAFEKVG-DT---GSTTMEESQTLTDEVEFTEGLTIDR-GYVSPYFVNDQERQLCEMLDPKILVTDQKIENVNDLIPLLEACVKTKERLVIIAEDVVGEALSALVVNKMRGVLDVVAIKAPGFGTRRKDLLQDIAIATGATYVAQEVGVALDTVTPEMLGTCERIVVGKEETTIITDGKQADAMEKRIAQIKLEAENTDSMFDKEKAEERVAALGGGIARIKVGAATETELKDKKLRYEDALNAVKSALKMGILPGGGSTLSYL-LRKRDAIAGAMDDEDERRGADIVFNSLAAPVCQIAKNAGLEGQVVLSKV-EGKPFGFGYNAATGEYCDLFEAGVVDSAQVTLSALENSASIAGLVLTTEALIHE 553          
The following BLAST results are available for this feature:
BLAST of EWM26124.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108118|gb|EWM26124.1|0.000e+0100.00chaperonin [Nannochloropsis gaditana][more]
gi|585106610|gb|EWM24977.1|0.000e+054.09chaperonin [Nannochloropsis gaditana][more]
gi|224004005|ref|XP_002291674.1|2.233e-17950.35predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|375332061|gb|AFA52570.1|1.474e-17349.26chaperonin [Vaucheria litorea][more]
gi|399949629|gb|AFP65287.1|1.317e-16846.6560 kDa heat shock protein, CPN60 protein (nucleomo... [more]
gi|298707119|emb|CBJ29911.1|3.849e-16849.16chaperonin cpn60 [Ectocarpus siliculosus][more]
gi|1210525706|dbj|GAX15522.1|9.617e-16648.36chaperonin GroEL [Fistulifera solaris][more]
gi|1210532053|dbj|GAX09481.1|1.375e-16548.89chaperonin GroEL [Fistulifera solaris][more]
gi|160331651|ref|XP_001712532.1|1.671e-16546.38cpn60 [Hemiselmis andersenii] >gi|159765981|gb|ABW... [more]
gi|676391243|ref|XP_009038899.1|3.158e-16451.49hypothetical protein AURANDRAFT_72012 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4562rna4562Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications