EWM30272.1, cds455 (CDS) Nannochloropsis gaditana

Overview
NameEWM30272.1
Unique Namecds455
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1136084..1136594 -
Alignment locationCM002455.1:1135947..1135999 -
Alignment locationCM002455.1:1135796..1135840 -
Alignment locationCM002455.1:1135454..1135679 -
Alignment locationCM002455.1:1134710..1135287 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30272.1
Products-adenosyl-methyltransferase
Orig transcript idgnl|cribi|Naga_100003g25.1789.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1136084..1136594 -
CM002455.1supercontigCM002455.1:1135947..1135999 -
CM002455.1supercontigCM002455.1:1135796..1135840 -
CM002455.1supercontigCM002455.1:1135454..1135679 -
CM002455.1supercontigCM002455.1:1134710..1135287 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR023397SAM-dep_MeTrfase_MraW_recog
IPR029063SAM-dependent_MTases
IPR002903RsmH
Homology
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|585112931|gb|EWM30272.1| (s-adenosyl-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 959.903 bits (2480), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query:    1 MGSCGQIGFLFSNTKLFASFSLCRPFSSRRRPRPCTSDPHVDKSDSIEVHTNENKIASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGEAQVRARVDALPTVTYTKPRQIPHMEKSESTIVSNNGDEMKARQEAGDRGDERRGRGKKGNADSEDSENEDNSTQKTE 470
            MGSCGQIGFLFSNTKLFASFSLCRPFSSRRRPRPCTSDPHVDKSDSIEVHTNENKIASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGEAQVRARVDALPTVTYTKPRQIPHMEKSESTIVSNNGDEMKARQEAGDRGDERRGRGKKGNADSEDSENEDNSTQKTE
Sbjct:    1 MGSCGQIGFLFSNTKLFASFSLCRPFSSRRRPRPCTSDPHVDKSDSIEVHTNENKIASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGEAQVRARVDALPTVTYTKPRQIPHMEKSESTIVSNNGDEMKARQEAGDRGDERRGRGKKGNADSEDSENEDNSTQKTE 470          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|503834163|ref|WP_014068157.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Rhodothermus marinus] >gi|345113777|gb|AEN74609.1| Ribosomal RNA small subunit methyltransferase H [Rhodothermus marinus SG0.5JP17-172])

HSP 1 Score: 308.531 bits (789), Expect = 1.066e-98
Identity = 172/340 (50.59%), Postives = 217/340 (63.82%), Query Frame = 0
Query:   50 HTNENKIASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERT 389
            HT+    A P+ S YH PV+W+ V+E LVTD  G Y+D T+GGGGH+ A+L  L  P G+VI +D+DP+ALD   +RL   V  GR + ++ NF     +L   G+               G+LLDLGVSSHQLD A RGFSF+ +GPLDMRM      PTS   +       A  ++  W    L++VLR YGEEPRA K+ARAI  +RP+++T EL EVV +  P  E  K LARVFQ LRIAVN E++ALE  L  +TR VR GGRLVVLSYHSLEDR VKRFLR GN +G   RDFYG  ++ WR +   +IRP +DEV+ NPRARS  +R+ ER 
Sbjct:    7 HTDTGA-AGPYGSPYHVPVLWKAVVEGLVTDPAGCYVDATIGGGGHTAALLDALA-PEGRVIGIDRDPEALDAVRRRLGDAVEAGRLQLVQGNFADLEAILDRLGV-----------AQIDGLLLDLGVSSHQLDEALRGFSFQAEGPLDMRMD-----PTSPGPT-------AAQLLERWSEYELAEVLRRYGEEPRARKLARAICRARPIRTTAELAEVVRREVPPKEATKTLARVFQALRIAVNDELQALERALEAATRRVRPGGRLVVLSYHSLEDRRVKRFLRYGNLKGEPVRDFYGRLIAPWRPLTGRAIRPSDDEVAANPRARSARLRIAERV 321          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|551206812|ref|WP_022834862.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Salisaeta longa])

HSP 1 Score: 306.605 bits (784), Expect = 6.354e-98
Identity = 167/336 (49.70%), Postives = 210/336 (62.50%), Query Frame = 0
Query:   58 SPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGE 393
            +P+++ YH+PV+   V+ HL+ D  G Y+D TLGGGGH+ A+L  L  P G VI +DQDP+ALD A  RL +    GR   LR NFR  + +L   G+ +             G+LLDLGVSSHQ+D AARGFSF+ +GPLDMRM              P   L+A  IVN W +  L  VLR YGEE RA+ IARAI   RPL +T  L  VV  C P  +  K LARVFQGLRIAVN E++ LE +L Q+T +VR GGRL VL+YHSLEDR VKR+LR GN EG   RD YG+ V+ W  V  T+    +DEV+ NPRARS  +RVG+R +  +
Sbjct:    8 TPYATAYHAPVLCDAVVAHLMHDPSGCYVDGTLGGGGHTAALLDALG-PDGHVIGIDQDPEALDVARNRLSEARAAGRCTLLRGNFRNLSALLADAGVSS-----------VDGVLLDLGVSSHQIDEAARGFSFQQNGPLDMRM-------------DPTRGLTAHQIVNNWPLADLRDVLRQYGEERRAHNIARAICRERPLDTTLALAHVVRGCVPPPDEKKTLARVFQGLRIAVNAELDVLETVLEQTTDVVRIGGRLAVLTYHSLEDRRVKRYLRDGNFEGTPRRDMYGNRVAPWTPVHETTA--TDDEVAANPRARSARLRVGQRRDTAD 316          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|502608123|ref|WP_012845189.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Rhodothermus marinus] >gi|262335782|gb|ACY49579.1| S-adenosyl-methyltransferase MraW [Rhodothermus marinus DSM 4252])

HSP 1 Score: 299.286 bits (765), Expect = 4.788e-95
Identity = 169/340 (49.71%), Postives = 216/340 (63.53%), Query Frame = 0
Query:   50 HTNENKIASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERT 389
            HT+    A P+ S YH PV+W+ V+E LVTD  G Y+D T+GGGGH+ A+L     P G+VI +D+DP+AL+   +RL   +  GR + ++ NF     +L   G+               G+LLDLGVSSHQLD A RGFSF+ +GPLDMRM      PTS   +       A  ++  W    L++VLR YGEEPRA K+ARAI  +RP+++T EL EVV +     E  K LARVFQ LRIAVN E++ALE  L  +TR VR GGRLVVLSYHSLEDR VKRFLR GN +G   RDFYG  ++ WR + R +IRP +DEV+ NPRARS  +R+ ER 
Sbjct:    7 HTDTGA-AGPYGSPYHVPVLWKAVVEGLVTDPAGCYVDATIGGGGHAAALLD-ALAPEGRVIGIDRDPEALEAVRRRLSDAIEAGRLQLVQGNFADLEAILDRLGV-----------AQIDGLLLDLGVSSHQLDEALRGFSFQAEGPLDMRMD-----PTSPGPT-------AAQLLERWSEYELAEVLRRYGEEPRARKLARAICRARPIRTTAELAEVVRREVSPKEATKTLARVFQALRIAVNDELQALERALEAATRRVRPGGRLVVLSYHSLEDRRVKRFLRYGNLKGEPVRDFYGRLIAPWRPLTRRAIRPSDDEVAANPRARSARLRIAERV 321          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|1119821894|ref|WP_072714693.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Rhodothermus profundi] >gi|1109814832|emb|SHK31058.1| 16S rRNA (cytosine1402-N4)-methyltransferase [Rhodothermus profundi])

HSP 1 Score: 294.278 bits (752), Expect = 3.949e-93
Identity = 169/333 (50.75%), Postives = 211/333 (63.36%), Query Frame = 0
Query:   57 ASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERT 389
            A P+ S YH PV+ + V+E LVTD  G Y+D T+GGGGH+ A+L     P G+VI +D+DP+AL+    RL   +  GR   ++ NF A  + +L+          G E     G+LLDLGVSSHQLD A RGFSF+  GPLDMRM      PTS   +       A  ++  W    L++VLR YGEE RA+K+ARAI  +RP+ +TTEL EVV +  P  E  K LARVFQ LRIAVN E++ALE +L  +TR VR GGRLVVLSYHSLEDR VKRFLR GN  G   RDFYG  +  WR + R +IRP +DEV  NPRARS  +R+ ER 
Sbjct:   13 ARPYGSPYHVPVLCQAVVEGLVTDPAGCYVDATIGGGGHAAALLNA-LAPQGRVIGIDRDPEALEAVRHRLGDAIAAGRLLLVQGNF-ADLETILNR--------LGVEQ--IDGVLLDLGVSSHQLDEALRGFSFQAAGPLDMRMD-----PTSPGPT-------AAQLLERWSAHELAEVLRRYGEERRAHKLARAICQARPITTTTELAEVVRRVVPAREATKTLARVFQALRIAVNDELQALERVLVAATRRVRPGGRLVVLSYHSLEDRRVKRFLRYGNLAGEPVRDFYGRLLRPWRPLTRRAIRPSDDEVEANPRARSARLRIAERI 321          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|499722595|ref|WP_011403329.1| (ribosomal RNA small subunit methyltransferase H [Salinibacter ruber] >gi|83816833|ref|YP_444696.1| S-adenosyl-methyltransferase MraW [Salinibacter ruber DSM 13855] >gi|123529490|sp|Q2S535.1|RSMH_SALRD RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH >gi|83758227|gb|ABC46340.1| S-adenosyl-methyltransferase MraW [Salinibacter ruber DSM 13855])

HSP 1 Score: 291.967 bits (746), Expect = 4.893e-92
Identity = 164/335 (48.96%), Postives = 204/335 (60.90%), Query Frame = 0
Query:   60 FSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGEA 394
            +++++H+PV+  +V   LVTD  G Y+D TLGGGGH+ A+L  L+ P G V+ +D+DP+AL+ A  RL  E   GRF A+   F    DVL +E LI           P  G+LLDLGVSSHQ+DV  RGFSFR +GPLDMRM              P   L+A  +VN W    L  VLR YGEE RA +IARA+  +RPL +T  L EVV  CAP  +  K L RVFQ LRI VN E++ LE +L Q+T +VR GGR+  +SYHSLEDR VKR+LR GN EG   RD YG  V+ W    R  I   E EV  NPRARS  +RV ER +  EA
Sbjct:   19 YATDFHAPVLSHDVQARLVTDASGRYVDATLGGGGHARALLDVLD-PDGVVLGIDRDPEALETARDRLADEREAGRFWAVHGTFGNLRDVLAAEDLI-----------PIDGLLLDLGVSSHQIDVPERGFSFRDEGPLDMRM-------------DPQRGLTAQQVVNGWGERDLRDVLREYGEESRAGQIARALCDARPLDTTRALAEVVEDCAPPPDTVKTLTRVFQALRIVVNAELDELEQVLEQATEVVRTGGRIAAISYHSLEDRRVKRYLRYGNFEGEPRRDLYGTLVAPWAETPRGPIEAGESEVEANPRARSAHLRVAERRDDDEA 328          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|502826102|ref|WP_013061078.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Salinibacter ruber] >gi|294342782|emb|CBH23560.1| S-adenosyl-methyltransferase mraW [Salinibacter ruber M8])

HSP 1 Score: 290.812 bits (743), Expect = 1.226e-91
Identity = 165/335 (49.25%), Postives = 203/335 (60.60%), Query Frame = 0
Query:   60 FSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGEA 394
            +++++H+PV+  +V   LVTD  G Y+D TLGGGGH+ A+L  L+ P G V+ +D+DP+AL+ A  RL  E   GRF A+   F    DVL +E LI           P  G+LLDLGVSSHQ+DV  RGFSFR +GPLDMRM              P   L+A  IVN W    L  VLR YGEE RA +IARA+  +RPL +T  L EVV  C P  +  K L RVFQ LRIAVN E++ LE  L Q+T +VR GGR+  +SYHSLEDR VKR+LR GN EG   RD YG  V+ W    R  I   E EV  NPRARS  +RV ER +  EA
Sbjct:   19 YATDFHAPVLSHDVQARLVTDASGRYVDATLGGGGHARALLDVLD-PDGVVLGIDRDPEALETARDRLADEREAGRFWAVHGTFGNLRDVLAAEDLI-----------PIDGLLLDLGVSSHQIDVPERGFSFRDEGPLDMRM-------------DPQRGLTAQQIVNGWGERDLRDVLREYGEESRAGQIARALCDARPLDTTRALAEVVEDCVPPPDTVKTLTRVFQALRIAVNAELDELEQALEQATEVVRTGGRIAAISYHSLEDRRVKRYLRYGNFEGEPRRDLYGTLVAPWAETPRGPIEAGESEVEANPRARSAHLRVAERRDDDEA 328          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|1056700855|ref|WP_068126129.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Rhodothermaceae bacterium RA] >gi|1167576878|gb|ARA93738.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Rhodothermaceae bacterium RA])

HSP 1 Score: 284.648 bits (727), Expect = 4.211e-89
Identity = 162/334 (48.50%), Postives = 210/334 (62.87%), Query Frame = 0
Query:   57 ASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTE 390
            A P++S YH+PV+   V++ LVTD  G+Y+D TLGGGGH+ A+L RL  P G+V+ +DQD  AL  A  RL   +  GRF A+R NF     +L   G  T            +G+LLDLG+SSHQ+DV  RGFS+   GPLDMRM    +             L+A +IVNTWE GAL ++L+AYG+EPRA ++ARAI  +RPL++T  L  VV    P  E  K LARVFQ LRIAVN E+  LE +L  + R++R GGR+ V+SYHSLEDR VKR  R GN  GR  RD YG+ ++ WR +    + P  +EV+ NPRARS  +RV ERTE
Sbjct:   19 ARPYASGYHAPVLCIPVVDALVTDPAGVYVDATLGGGGHTAALLDRLA-PAGRVVGIDQDEAALAAARTRLAPALEAGRFLAVRGNFGDLEALLAEAGFDT-----------VNGLLLDLGISSHQIDVPERGFSYAAAGPLDMRMDRRQR-------------LTAHEIVNTWEAGALRRILQAYGDEPRAAQVARAIVQARPLETTEALAAVVRAAVPTREEVKTLARVFQALRIAVNEELAMLEQVLAAAARVLRPGGRIAVISYHSLEDRRVKRVFRHGNLAGRPVRDLYGNPLTPWRELTHRPVTPPAEEVAANPRARSARLRVAERTE 327          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|938260832|gb|KPP96106.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Bacteroidetes bacterium HLUCCA01])

HSP 1 Score: 266.159 bits (679), Expect = 2.059e-82
Identity = 149/325 (45.85%), Postives = 192/325 (59.08%), Query Frame = 0
Query:   64 YHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGER 388
            YH PV+  E L  L+TD  G+Y+D TLGGGGH+ A+LT L +   KV  +DQD DAL  A KR+       RF  ++ NF    DVLL   L           G  +GILLD+GVSSHQ+D   RGFSFR DGPLDMRM              P + LSA  +VN ++   L+++L  YGEE  + KI   I + RP+++T ELR+ V          K LARVFQ +RI VN E+E L   L +S +L+  GGR+ V+SYHSLEDR VK F RAGN +G VE+DFYG+++     V    I P E E++ NPRARS  +RV E+
Sbjct:    6 YHDPVLCEETLNVLITDPNGIYVDGTLGGGGHASALLTHLSK-SAKVFGIDQDDDALRAASKRIND----NRFSTVKGNF-GYMDVLLPSSL----------QGRVNGILLDIGVSSHQIDQGTRGFSFREDGPLDMRMD-------------PRNPLSAAIVVNNYDPAELTRILFTYGEERFSRKITETIVARRPVETTAELRQAVESVIRGPHVNKSLARVFQAIRIEVNQELEMLTMALHKSVKLLAEGGRIAVMSYHSLEDRLVKHFFRAGNADGVVEKDFYGNDIRPLNPVKPALITPSEQEIARNPRARSARLRVAEK 301          
BLAST of EWM30272.1 vs. NCBI_GenBank
Match: gi|648475467|ref|WP_026167218.1| (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Balneola vulgaris])

HSP 1 Score: 263.462 bits (672), Expect = 2.704e-81
Identity = 149/331 (45.02%), Postives = 206/331 (62.24%), Query Frame = 0
Query:   62 SEY--HSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGPMKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTE 390
            SEY  H PVM  E ++ L+TD   +Y+D TLGGGGHS+ IL RL + G  + ++DQD +A+  A KR+ Q+    RFK ++ NF   T +L       P        G  +GILLDLGVS+HQ+  A RGFSF+ DGPLDMRM G +            S +SA  +VN +E   L  V+  YGEE  + +IA+AI  +RP+++T EL  ++ +  P     K LARVFQG+RI VN E++ L+ +L+QS  +++ GGR+VV+SYHSLEDR VK+F +AGN EG  E+DFYG+ +S  + V R  I P  DEV+ N  ARS  +R+ E+ E
Sbjct:    2 SEYIEHIPVMLNECMDALITDKDAIYIDATLGGGGHSKEILARLSDEG-TLYSIDQDDEAIAAASKRIGQD---PRFKIIKGNFGYLTTIL------PPHVH-----GQVAGILLDLGVSTHQIKEAERGFSFQEDGPLDMRM-GNL------------SGISAYQVVNEYEYERLRDVIFHYGEERGSRQIAKAIIENRPIETTGELAAIIKEIVPPKFAVKSLARVFQGIRIEVNRELDVLKDVLSQSLEVLKPGGRIVVMSYHSLEDRIVKKFFKAGNFEGEQEKDFYGNVISPIKPVNRQVITPSPDEVAKNSAARSAKLRIAEKVE 304          
The following BLAST results are available for this feature:
BLAST of EWM30272.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112931|gb|EWM30272.1|0.000e+0100.00s-adenosyl-methyltransferase [Nannochloropsis gadi... [more]
gi|503834163|ref|WP_014068157.1|1.066e-9850.5916S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
gi|551206812|ref|WP_022834862.1|6.354e-9849.7016S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
gi|502608123|ref|WP_012845189.1|4.788e-9549.7116S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
gi|1119821894|ref|WP_072714693.1|3.949e-9350.7516S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
gi|499722595|ref|WP_011403329.1|4.893e-9248.96ribosomal RNA small subunit methyltransferase H [S... [more]
gi|502826102|ref|WP_013061078.1|1.226e-9149.2516S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
gi|1056700855|ref|WP_068126129.1|4.211e-8948.5016S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
gi|938260832|gb|KPP96106.1|2.059e-8245.8516S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
gi|648475467|ref|WP_026167218.1|2.704e-8145.0216S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna455rna455Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications