EWM26089.1, cds4522 (CDS) Nannochloropsis gaditana

Overview
NameEWM26089.1
Unique Namecds4522
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:856826..857090 +
Alignment locationCM002463.1:857178..857270 +
Alignment locationCM002463.1:857419..857582 +
Alignment locationCM002463.1:857756..857866 +
Alignment locationCM002463.1:857969..858050 +
Alignment locationCM002463.1:858174..858490 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26089.1
Productprotein af-9
Orig transcript idgnl|cribi|Naga_100014g11.9266.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:856826..857090 +
CM002463.1supercontigCM002463.1:857178..857270 +
CM002463.1supercontigCM002463.1:857419..857582 +
CM002463.1supercontigCM002463.1:857756..857866 +
CM002463.1supercontigCM002463.1:857969..858050 +
CM002463.1supercontigCM002463.1:858174..858490 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR005033YEATS
Homology
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|585108083|gb|EWM26089.1| (protein af-9 [Nannochloropsis gaditana])

HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query:    1 MPNLFTSLRHSQELELLLFLPTVRSSSPSPFKYRLPSTLPDSPPSDMEESKPPRRMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLEERNAASPPPGPPPANGLPTAPVPASGAAPSTSAESTAPPRDALVSTSSGTTQTISSQASVPSAAPQGPPSTAPQPISTAQQVPSASN 343
            MPNLFTSLRHSQELELLLFLPTVRSSSPSPFKYRLPSTLPDSPPSDMEESKPPRRMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLEERNAASPPPGPPPANGLPTAPVPASGAAPSTSAESTAPPRDALVSTSSGTTQTISSQASVPSAAPQGPPSTAPQPISTAQQVPSASN
Sbjct:    1 MPNLFTSLRHSQELELLLFLPTVRSSSPSPFKYRLPSTLPDSPPSDMEESKPPRRMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLEERNAASPPPGPPPANGLPTAPVPASGAAPSTSAESTAPPRDALVSTSSGTTQTISSQASVPSAAPQGPPSTAPQPISTAQQVPSASN 343          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|298710638|emb|CBJ32065.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 186.808 bits (473), Expect = 4.163e-54
Identity = 101/224 (45.09%), Postives = 144/224 (64.29%), Query Frame = 0
Query:   43 PPSDMEESKPPRRMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHG-NSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCL---QHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLEERNAAS 262
            PP+D+    P  R KG++V  PIAYGS+A+ + +K + +  TH+WTL+VR P+G D+   + K VFTLH SF    RE ++ PFEVTE GWGEFEA + ++FKD +EK V++ H ++L+H   + T+QP  KK VV E+YDEVVFTDP EEFY  L   Q L   + H H  Q+ F  +SD + ++R+ AA E+V +QLR  KD++ + +     L     A+S
Sbjct:    7 PPADV----PKIRKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREITSPPFEVTEMGWGEFEAKMTMHFKDPNEKPVDVLHQLRLYHDPATGTTQP--KKAVVAEFYDEVVFTDPYEEFYNTLMQGQKLLPQRKHEH--QEHFSTFSDGDTLQRLAAAREWVHNQLRETKDRIRKADMDMAQLKASATASS 222          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|1173960497|gb|OQS06617.1| (hypothetical protein THRCLA_01341 [Thraustotheca clavata])

HSP 1 Score: 160.999 bits (406), Expect = 2.838e-44
Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLF-HGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLEERNA 260
            R KGV V  PIAYGS+A ++ +K+E+ + TH+W +YVR   G DL  ++ K V +LH+SF N +R  +  P+EV+E GWGEFE  I +YF+D  EK V++ H + L+  GN   S    KKPVV E+YDE+VF +P+E  Y+ L    + +   + LQ+ +P+YS+++DI+ +  A +F+  ++   K  L+  E+ AK L E+  A
Sbjct:    5 RQKGVVVSKPIAYGSVAMYLGRKSEETK-THRWHIYVRGIAGEDLSYMISKVVISLHNSFANPVRVLTEPPYEVSEYGWGEFETKIQIYFQDPDEKPVDIIHMLILYPPGNQIAS---TKKPVVSEFYDELVFNEPSELMYKKLMAGPDKQAPPNPLQEHWPVYSEIQDIQVLTDAQKFLAQEVAQTKKLLIEAETEAKELKEKIAA 207          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|953488136|emb|CEG48153.1| (yeats family protein [Plasmopara halstedii])

HSP 1 Score: 160.229 bits (404), Expect = 4.927e-44
Identity = 83/203 (40.89%), Postives = 123/203 (60.59%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQP-NNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLE 256
            R K V V  PI YGS+A ++ +K E+ + TH+W++Y+R     DL  ++ K V +LH SF N +R  +  P+EVTE GWGEFE  I +YF+D +E+ + + H + L+  N   SQP + KKPVV E+YDE+VF +PTE FY+ L    + ++    +QD  P YSDVE ++ +  A E V  +++  K  LL  +   K L E
Sbjct:    5 RQKNVVVSKPIVYGSVAMYLGRKAEETK-THRWSIYLRGVDNEDLSYMISKVVISLHVSFANPVRVLTEPPYEVTELGWGEFETRIQIYFQDPNERPISIIHLLVLYPPN---SQPASTKKPVVSEFYDELVFNEPTESFYKKLMAGPDRQSAPLAMQDYLPTYSDVEVLKTLARAEELVKKEVQDTKTLLLSADMEIKELKE 203          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|675168475|ref|XP_008893122.1| (hypothetical protein PPTG_01545 [Phytophthora parasitica INRA-310] >gi|568106690|gb|ETN21320.1| hypothetical protein PPTG_01545 [Phytophthora parasitica INRA-310])

HSP 1 Score: 159.844 bits (403), Expect = 9.815e-44
Identity = 84/203 (41.38%), Postives = 126/203 (62.07%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQP-NNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLE 256
            R+K V V  PI YGS+A ++ +K E+ + TH+W++Y+R     DL  ++ K V +LH SF N +R  +  P+EVTE GWGEF+ LI +YF D +E+ + + H + LF  N   SQP + KKPVV E+YDE+VF +PTE FY+ L    + ++    +QD  P+YSDVE ++ +  A  FV  +++  K+ LL  +   K L E
Sbjct:    5 RLKSVVVSKPILYGSVATYLGRKAEETK-THRWSIYLRGADNEDLSYMISKVVISLHVSFANPVRVLTEPPYEVTELGWGEFDTLIQIYFHDPNERPISVIHHLVLFPPN---SQPASTKKPVVSEFYDELVFNEPTEFFYKKLMAGPDRQSPALAMQDHLPIYSDVEILKTLARAENFVKKEVQDTKNLLLSADMEIKELKE 203          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|566022420|gb|ETI45331.1| (hypothetical protein F443_10061 [Phytophthora parasitica P1569] >gi|567959733|gb|ETK85301.1| hypothetical protein L915_09855 [Phytophthora parasitica] >gi|567988442|gb|ETL38720.1| hypothetical protein L916_09762 [Phytophthora parasitica] >gi|568017673|gb|ETL91850.1| hypothetical protein L917_09683 [Phytophthora parasitica] >gi|568048057|gb|ETM45124.1| hypothetical protein L914_09731 [Phytophthora parasitica] >gi|570326025|gb|ETO73973.1| hypothetical protein F444_10159 [Phytophthora parasitica P1976] >gi|570949890|gb|ETP15147.1| hypothetical protein F441_10004 [Phytophthora parasitica CJ01A1] >gi|570983403|gb|ETP43244.1| hypothetical protein F442_09969 [Phytophthora parasitica P10297] >gi|970619193|gb|KUF67232.1| YEATS domain-containing protein 4 [Phytophthora nicotianae] >gi|970658606|gb|KUF96348.1| Delta6 desaturase [Phytophthora nicotianae])

HSP 1 Score: 159.844 bits (403), Expect = 9.815e-44
Identity = 84/203 (41.38%), Postives = 126/203 (62.07%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQP-NNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLE 256
            R+K V V  PI YGS+A ++ +K E+ + TH+W++Y+R     DL  ++ K V +LH SF N +R  +  P+EVTE GWGEF+ LI +YF D +E+ + + H + LF  N   SQP + KKPVV E+YDE+VF +PTE FY+ L    + ++    +QD  P+YSDVE ++ +  A  FV  +++  K+ LL  +   K L E
Sbjct:    5 RLKSVVVSKPILYGSVATYLGRKAEETK-THRWSIYLRGADNEDLSYMISKVVISLHVSFANPVRVLTEPPYEVTELGWGEFDTLIQIYFHDPNERPISVIHHLVLFPPN---SQPASTKKPVVSEFYDELVFNEPTEFFYKKLMAGPDRQSPALAMQDHLPIYSDVEILKTLARAENFVKKEVQDTKNLLLSADMEIKELKE 203          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|1026769476|gb|OAE29407.1| (hypothetical protein AXG93_2090s1130 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 161.77 bits (408), Expect = 2.552e-43
Identity = 96/232 (41.38%), Postives = 134/232 (57.76%), Query Frame = 0
Query:   46 DMEESKPPRRMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFK-DAHEKSVELRHFVKLFHGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQ----------------------HLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKAL 254
            D E+  P RR+K V + +PIAYG++++ + KK ++   +H+WT+YVRS  G DLG V+KK VF LH SFNN  R   A PFE+TE GWGEFE  I VYF  DA EK +E+ H +KL+  + +  Q N KKPVV E YDE+VFT+P+E F+  +Q                        GETK     +   F  +SD E++  I +A + V  ++   K  LL++E+ A  L
Sbjct:   99 DNEKKNPVRRVKDVEMTVPIAYGTVSFWLGKKADEYH-SHRWTVYVRSALGEDLGPVIKKVVFQLHPSFNNPTRSVEAAPFELTETGWGEFEIGITVYFHPDASEKPLEIFHHLKLYPEDDSGPQ-NTKKPVVVESYDEIVFTEPSEAFFSRIQKHPSLFLNGKQNPPSAGTENEKKRGETK--EQNITQWFLKHSDSEELEAIISARDNVMTRVNKLKADLLQLENEAARL 326          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|1210513590|dbj|GAX27462.1| (YEATS domain-containing protein 4 [Fistulifera solaris])

HSP 1 Score: 159.458 bits (402), Expect = 3.011e-43
Identity = 88/206 (42.72%), Postives = 122/206 (59.22%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLF-HGNSATS----QPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGET-------KTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVE 248
            R++   VCLP+A GS+A+++  K+  D  TH+WTLYVR P G DL  VL+K +F LH SF    RE +  P+EVTE+GWGEFEA I + +KD  E+SV L   +KL+  G   T+    Q + + PVV E YDE+V T+PTE FYQ LQ +G T         H H     FP YSD +  + +  A + V + L   K  L++++
Sbjct:   13 RLENTIVCLPVATGSVAFYLGNKS--DTQTHEWTLYVRGPSGEDLSVVLEKVIFQLHPSFAQPTRELTEPPYEVTERGWGEFEAQIRLIWKDPSEQSVLLSQPIKLYPPGAPLTAQQQLQQSTETPVVSETYDEIVITNPTESFYQQLQSIGTTPSCQELYSQHAH-----FPTYSDTQVCQAMLQAQKLVNEHLAQTKQNLIQLD 211          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|1214705841|gb|OWZ17477.1| (hypothetical protein PHMEG_0008580 [Phytophthora megakarya])

HSP 1 Score: 156.377 bits (394), Expect = 1.605e-42
Identity = 81/202 (40.10%), Postives = 123/202 (60.89%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLFHGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGETKTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVESGAKALLE 256
            R KGV V  PI YGS+A ++ +K E+ + TH+W++Y+R     DL  ++ K V +LH SF N +R  +  P+EVTE GWGEFE  I +YF D +E+ + + H + L+  NS  +  + KKPVV E+YDE+VF +PTE FY+ +    + ++    +QD  P YSDVE ++ +  A  FV  +++  K+ LL  +   K L E
Sbjct:    5 RQKGVVVSKPILYGSVATYLGRKAEETK-THRWSIYLRGVDNEDLSYIINKVVISLHVSFANPVRVLTEPPYEVTELGWGEFETRIQIYFHDPNERPISIIHLLVLYPPNSLPT--STKKPVVSEFYDELVFNEPTEFFYKKMMAGPDRQSPPLAMQDHLPTYSDVEVLKTLARAENFVKKEVQDTKNLLLSADMEIKELKE 203          
BLAST of EWM26089.1 vs. NCBI_GenBank
Match: gi|1210514589|dbj|GAX26546.1| (YEATS domain-containing protein 4 [Fistulifera solaris])

HSP 1 Score: 156.762 bits (395), Expect = 3.308e-42
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 0
Query:   55 RMKGVTVCLPIAYGSIAWHMTKKTEQDQCTHQWTLYVRSPHGHDLGAVLKKTVFTLHSSFNNHIREASAHPFEVTEKGWGEFEALIDVYFKDAHEKSVELRHFVKLF-----HGNSATSQPNNKKPVVHEYYDEVVFTDPTEEFYQCLQHLGET-------KTHRHTLQDLFPLYSDVEDIRRIQAAHEFVTDQLRTAKDKLLRVE 248
            R +   VCLP+A GSIA+++  K+  D  TH+WTLYVR P G DL  VL+K +F LH SF    RE +  P+EVTE+GWGEFEA I + +KD  E+SV L   +KL+            Q + + PVV E YDE+VFT+PTE FYQ LQ +G           H H     FP YSD E  + I  A + + + L   K  L++++
Sbjct:   13 RRENTIVCLPVATGSIAFYLGNKS--DTQTHEWTLYVRGPSGEDLSVVLEKVIFQLHPSFAQPTRELTEPPYEVTERGWGEFEAQIRLIWKDPTEQSVLLSQPIKLYPPGAPLTAQQQQQQSTETPVVSETYDEIVFTNPTESFYQQLQSIGTAPSCQELYSQHAH-----FPTYSDNEVCQAILQAQKLINEHLAQTKQNLIQLD 211          
The following BLAST results are available for this feature:
BLAST of EWM26089.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108083|gb|EWM26089.1|0.000e+0100.00protein af-9 [Nannochloropsis gaditana][more]
gi|298710638|emb|CBJ32065.1|4.163e-5445.09conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173960497|gb|OQS06617.1|2.838e-4441.06hypothetical protein THRCLA_01341 [Thraustotheca c... [more]
gi|953488136|emb|CEG48153.1|4.927e-4440.89yeats family protein [Plasmopara halstedii][more]
gi|675168475|ref|XP_008893122.1|9.815e-4441.38hypothetical protein PPTG_01545 [Phytophthora para... [more]
gi|566022420|gb|ETI45331.1|9.815e-4441.38hypothetical protein F443_10061 [Phytophthora para... [more]
gi|1026769476|gb|OAE29407.1|2.552e-4341.38hypothetical protein AXG93_2090s1130 [Marchantia p... [more]
gi|1210513590|dbj|GAX27462.1|3.011e-4342.72YEATS domain-containing protein 4 [Fistulifera sol... [more]
gi|1214705841|gb|OWZ17477.1|1.605e-4240.10hypothetical protein PHMEG_0008580 [Phytophthora m... [more]
gi|1210514589|dbj|GAX26546.1|3.308e-4242.72YEATS domain-containing protein 4 [Fistulifera sol... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4534rna4534Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications