EWM26111.1, cds4514 (CDS) Nannochloropsis gaditana

Overview
NameEWM26111.1
Unique Namecds4514
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:832783..832806 -
Alignment locationCM002463.1:830156..832684 -

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Properties
Property NameValue
Protein idEWM26111.1
ProductHomeodomain-like protein
Orig transcript idgnl|cribi|Naga_100014g3.9288.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:832783..832806 -
CM002463.1supercontigCM002463.1:830156..832684 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
[Close]
BLAST of EWM26111.1 vs. NCBI_GenBank
Match: gi|585108105|gb|EWM26111.1| (Homeodomain-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1676.37 bits (4340), Expect = 0.000e+0
Identity = 850/850 (100.00%), Postives = 850/850 (100.00%), Query Frame = 0 
Query:    1 MEDVGRIEPSDSKGLSDTHSGDVNWVAVGREAMEDDGLRSMKRLREDITPSPSLLSCYNPSSGQSGLAGDVDFARVFDDYPLPAPGPLPTPQPRPAPAAGATSKAAVGEALVSPGREGEARAGSPLLGGDPGPGAPGNQRQASTAVHACKAAMGKTEDSIQASGSSAPPPPSSQALESTELESPACGSPLRLDHLSPFLVSVPGPLTADGGQHGYPPPGGANQASPPFRPMLAPTSLSRQASLLSQPPAWEDLGGLYDIQSGSHGLERAGTPSESSSWPLAEVAAGREAACGGPEGELPGEERGRQSGGSPSCHVAGLLSRESSSEGPSLSGGRAGGARGGKRGDVALTRRPSVEEVHGPPGIPRRGSISSSRSSKSILVREDKHGSFLTGFNGKGEEGGWTGYGGEGDDGEWEGMAGVSGEPSLPRRPDRAIRLPGPARAIMRSGEATAVGEKGAFECGRGAGVSSSTSGQERGGHAVSSALRHLPDSVSSRPGPPVQKGESEMFFSPTMDQSASSPGTASQSNTLPPHQSVSLRPEAGSSTGGHVAAAEREGDSCELASAWERIGPEYQAVLPDLLDDMLFHRTGKDEEAPGEGVRLLSDARPSSVDTLGAAGAHSDEASGAEQEAVLVWSSGWEEGSLERVVAATGGGRASAAREWSVAEIADFDKGVHAYRRCFDIIHRKCLPGKSVRRIVAWFYDEFKRSPGYRAWKEDKLIGRRVVLRQKRPRWKGGGWEEVKGTIQGSIRDEEGDELLTLNYDDGRVGQLYRYEAEPLLLGPGDEGEREEVKDGRVESEASGVTSQEEGTSISSPSSSAGEHMDVSLNAEKAESAQNADEVDGLEEGESDKQT 850
            MEDVGRIEPSDSKGLSDTHSGDVNWVAVGREAMEDDGLRSMKRLREDITPSPSLLSCYNPSSGQSGLAGDVDFARVFDDYPLPAPGPLPTPQPRPAPAAGATSKAAVGEALVSPGREGEARAGSPLLGGDPGPGAPGNQRQASTAVHACKAAMGKTEDSIQASGSSAPPPPSSQALESTELESPACGSPLRLDHLSPFLVSVPGPLTADGGQHGYPPPGGANQASPPFRPMLAPTSLSRQASLLSQPPAWEDLGGLYDIQSGSHGLERAGTPSESSSWPLAEVAAGREAACGGPEGELPGEERGRQSGGSPSCHVAGLLSRESSSEGPSLSGGRAGGARGGKRGDVALTRRPSVEEVHGPPGIPRRGSISSSRSSKSILVREDKHGSFLTGFNGKGEEGGWTGYGGEGDDGEWEGMAGVSGEPSLPRRPDRAIRLPGPARAIMRSGEATAVGEKGAFECGRGAGVSSSTSGQERGGHAVSSALRHLPDSVSSRPGPPVQKGESEMFFSPTMDQSASSPGTASQSNTLPPHQSVSLRPEAGSSTGGHVAAAEREGDSCELASAWERIGPEYQAVLPDLLDDMLFHRTGKDEEAPGEGVRLLSDARPSSVDTLGAAGAHSDEASGAEQEAVLVWSSGWEEGSLERVVAATGGGRASAAREWSVAEIADFDKGVHAYRRCFDIIHRKCLPGKSVRRIVAWFYDEFKRSPGYRAWKEDKLIGRRVVLRQKRPRWKGGGWEEVKGTIQGSIRDEEGDELLTLNYDDGRVGQLYRYEAEPLLLGPGDEGEREEVKDGRVESEASGVTSQEEGTSISSPSSSAGEHMDVSLNAEKAESAQNADEVDGLEEGESDKQT
Sbjct:    1 MEDVGRIEPSDSKGLSDTHSGDVNWVAVGREAMEDDGLRSMKRLREDITPSPSLLSCYNPSSGQSGLAGDVDFARVFDDYPLPAPGPLPTPQPRPAPAAGATSKAAVGEALVSPGREGEARAGSPLLGGDPGPGAPGNQRQASTAVHACKAAMGKTEDSIQASGSSAPPPPSSQALESTELESPACGSPLRLDHLSPFLVSVPGPLTADGGQHGYPPPGGANQASPPFRPMLAPTSLSRQASLLSQPPAWEDLGGLYDIQSGSHGLERAGTPSESSSWPLAEVAAGREAACGGPEGELPGEERGRQSGGSPSCHVAGLLSRESSSEGPSLSGGRAGGARGGKRGDVALTRRPSVEEVHGPPGIPRRGSISSSRSSKSILVREDKHGSFLTGFNGKGEEGGWTGYGGEGDDGEWEGMAGVSGEPSLPRRPDRAIRLPGPARAIMRSGEATAVGEKGAFECGRGAGVSSSTSGQERGGHAVSSALRHLPDSVSSRPGPPVQKGESEMFFSPTMDQSASSPGTASQSNTLPPHQSVSLRPEAGSSTGGHVAAAEREGDSCELASAWERIGPEYQAVLPDLLDDMLFHRTGKDEEAPGEGVRLLSDARPSSVDTLGAAGAHSDEASGAEQEAVLVWSSGWEEGSLERVVAATGGGRASAAREWSVAEIADFDKGVHAYRRCFDIIHRKCLPGKSVRRIVAWFYDEFKRSPGYRAWKEDKLIGRRVVLRQKRPRWKGGGWEEVKGTIQGSIRDEEGDELLTLNYDDGRVGQLYRYEAEPLLLGPGDEGEREEVKDGRVESEASGVTSQEEGTSISSPSSSAGEHMDVSLNAEKAESAQNADEVDGLEEGESDKQT 850
The following BLAST results are available for this feature:
BLAST of EWM26111.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108105|gb|EWM26111.1|0.000e+0100.00Homeodomain-like protein [Nannochloropsis gaditana... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4525rna4525Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications